RNA–Protein interactions for RNA: ENST00000616377.4

GTF2IP1-204, Transcript of general transcription factor IIi pseudogene 1, humanhuman

TSL 2 BASIC

Gene GTF2IP1, Length 2,632 nt, Biotype processed transcript, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IP1-204ENST00000616377 HMGB1P09429 215 aaKnown RBP28.13■■■□□ 2.09
GTF2IP1-204ENST00000616377 ZNF396Q96N95 335 aaPredicted RBP28.13■■■□□ 2.09
GTF2IP1-204ENST00000616377 PHRF1Q9P1Y6 1649 aaKnown RBP28.13■■■□□ 2.09
GTF2IP1-204ENST00000616377 CEP57L1Q8IYX8 460 aa28.13■■■□□ 2.09
GTF2IP1-204ENST00000616377 EXOSC10Q01780 885 aaKnown RBP28.12■■■□□ 2.09
GTF2IP1-204ENST00000616377 PIP4K2AP48426 406 aaPredicted RBP28.12■■■□□ 2.09
GTF2IP1-204ENST00000616377 UBE3BQ7Z3V4 1068 aa28.12■■■□□ 2.09
GTF2IP1-204ENST00000616377 NBPF11Q86T75 865 aa28.12■■■□□ 2.09
GTF2IP1-204ENST00000616377 KBTBD3Q8NAB2 608 aa28.12■■■□□ 2.09
GTF2IP1-204ENST00000616377 NAP1L2Q9ULW6 460 aaPredicted RBP28.12■■■□□ 2.09
GTF2IP1-204ENST00000616377 LAMA4Q16363 1823 aa28.12■■■□□ 2.09
GTF2IP1-204ENST00000616377 SALL1Q9NSC2 1324 aa28.11■■■□□ 2.09
GTF2IP1-204ENST00000616377 SH3TC1Q8TE82 1336 aa28.11■■■□□ 2.09
GTF2IP1-204ENST00000616377 ZNF397Q8NF99 534 aaPredicted RBP28.11■■■□□ 2.09
GTF2IP1-204ENST00000616377 ATL3Q6DD88 541 aa28.1■■■□□ 2.09
GTF2IP1-204ENST00000616377 AGXT2Q9BYV1 514 aa28.1■■■□□ 2.09
GTF2IP1-204ENST00000616377 PCDHA7Q9UN72 937 aa28.1■■■□□ 2.09
GTF2IP1-204ENST00000616377 AXIN2Q9Y2T1 843 aa28.1■■■□□ 2.09
GTF2IP1-204ENST00000616377 ANKRD13DQ6ZTN6 518 aa28.1■■■□□ 2.09
GTF2IP1-204ENST00000616377 ZNF771Q7L3S4 317 aaPredicted RBP28.1■■■□□ 2.09
GTF2IP1-204ENST00000616377 GABPB1Q06547 395 aaPredicted RBP28.09■■■□□ 2.09
GTF2IP1-204ENST00000616377 RABL6Q3YEC7 729 aaPredicted RBP28.09■■■□□ 2.09
GTF2IP1-204ENST00000616377 CHST3Q7LGC8 479 aa28.09■■■□□ 2.09
GTF2IP1-204ENST00000616377 FMR1NBQ8N0W7 255 aaPredicted RBP28.09■■■□□ 2.09
GTF2IP1-204ENST00000616377 C5P01031 1676 aa28.09■■■□□ 2.09
GTF2IP1-204ENST00000616377 ERBB3P21860 1342 aa28.09■■■□□ 2.09
GTF2IP1-204ENST00000616377 ELF2Q15723 593 aa28.08■■■□□ 2.09
GTF2IP1-204ENST00000616377 A0A1B0GVL5 298 aa28.08■■■□□ 2.09
GTF2IP1-204ENST00000616377 PDIA3P30101 505 aaKnown RBP28.08■■■□□ 2.09
GTF2IP1-204ENST00000616377 MRPS27Q92552 414 aaKnown RBP28.08■■■□□ 2.09
GTF2IP1-204ENST00000616377 ERO1AQ96HE7 468 aa28.08■■■□□ 2.09
GTF2IP1-204ENST00000616377 KCND1Q9NSA2 647 aa28.08■■■□□ 2.09
GTF2IP1-204ENST00000616377 E7EWF7 191 aa28.07■■■□□ 2.08
GTF2IP1-204ENST00000616377 GOLIM4O00461 696 aa28.07■■■□□ 2.08
GTF2IP1-204ENST00000616377 NAT10Q9H0A0 1025 aaKnown RBP28.07■■■□□ 2.08
GTF2IP1-204ENST00000616377 FBXO38Q6PIJ6 1188 aa28.07■■■□□ 2.08
GTF2IP1-204ENST00000616377 SDF4Q9BRK5 362 aa28.07■■■□□ 2.08
GTF2IP1-204ENST00000616377 SLFN14P0C7P3 912 aa28.06■■■□□ 2.08
GTF2IP1-204ENST00000616377 GSDMDP57764 484 aa28.06■■■□□ 2.08
GTF2IP1-204ENST00000616377 LRP10Q7Z4F1 713 aa28.06■■■□□ 2.08
GTF2IP1-204ENST00000616377 OSBPL5Q9H0X9 879 aaPredicted RBP28.06■■■□□ 2.08
GTF2IP1-204ENST00000616377 ATP5J2-PTCD1G3V325 749 aa28.06■■■□□ 2.08
GTF2IP1-204ENST00000616377 PTCD1O75127 700 aaKnown RBP28.06■■■□□ 2.08
GTF2IP1-204ENST00000616377 DSCC1Q9BVC3 393 aa28.06■■■□□ 2.08
GTF2IP1-204ENST00000616377 CARMIL3Q8ND23 1372 aa28.06■■■□□ 2.08
GTF2IP1-204ENST00000616377 NDUFA8P51970 172 aa28.05■■■□□ 2.08
GTF2IP1-204ENST00000616377 NFATC2IPQ8NCF5 419 aa28.05■■■□□ 2.08
GTF2IP1-204ENST00000616377 FDPSP14324 419 aaKnown RBP28.05■■■□□ 2.08
GTF2IP1-204ENST00000616377 DPCR1Q3MIW9 517 aa28.05■■■□□ 2.08
GTF2IP1-204ENST00000616377 ZNF496Q96IT1 587 aaPredicted RBP28.05■■■□□ 2.08
GTF2IP1-204ENST00000616377 SLU7O95391 586 aaKnown RBP28.05■■■□□ 2.08
GTF2IP1-204ENST00000616377 E4F1Q66K89 784 aaPredicted RBP28.05■■■□□ 2.08
GTF2IP1-204ENST00000616377 ADALQ6DHV7 355 aa28.05■■■□□ 2.08
GTF2IP1-204ENST00000616377 SLC52A2Q9HAB3 445 aa28.05■■■□□ 2.08
GTF2IP1-204ENST00000616377 HELLSQ9NRZ9 838 aa28.05■■■□□ 2.08
GTF2IP1-204ENST00000616377 KRT222Q8N1A0 295 aa28.04■■■□□ 2.08
GTF2IP1-204ENST00000616377 PAG1Q9NWQ8 432 aa28.04■■■□□ 2.08
GTF2IP1-204ENST00000616377 RTEL1Q9NZ71 1219 aa28.04■■■□□ 2.08
GTF2IP1-204ENST00000616377 PALLDQ8WX93 1383 aa28.04■■■□□ 2.08
GTF2IP1-204ENST00000616377 A0A087WZG4 1122 aa28.04■■■□□ 2.08
GTF2IP1-204ENST00000616377 HSPD1P10809 573 aaKnown RBP28.04■■■□□ 2.08
GTF2IP1-204ENST00000616377 OTUD7BQ6GQQ9 843 aa28.04■■■□□ 2.08
GTF2IP1-204ENST00000616377 LMOD2Q6P5Q4 547 aa28.04■■■□□ 2.08
GTF2IP1-204ENST00000616377 ADAMTS7Q9UKP4 1686 aa28.03■■■□□ 2.08
GTF2IP1-204ENST00000616377 ZNF274Q96GC6 653 aaPredicted RBP28.03■■■□□ 2.08
GTF2IP1-204ENST00000616377 NEUROD6Q96NK8 337 aa28.03■■■□□ 2.08
GTF2IP1-204ENST00000616377 XPO4Q9C0E2 1151 aaKnown RBP28.03■■■□□ 2.08
GTF2IP1-204ENST00000616377 KIAA1468Q9P260 1216 aa28.03■■■□□ 2.08
GTF2IP1-204ENST00000616377 IMPACTQ9P2X3 320 aa28.03■■■□□ 2.08
GTF2IP1-204ENST00000616377 ZMYM1Q5SVZ6 1142 aa28.02■■■□□ 2.08
GTF2IP1-204ENST00000616377 ARMCX5Q6P1M9 558 aa28.02■■■□□ 2.08
GTF2IP1-204ENST00000616377 SYTL4Q96C24 671 aaPredicted RBP28.02■■■□□ 2.08
GTF2IP1-204ENST00000616377 CLIC4Q9Y696 253 aa28.02■■■□□ 2.08
GTF2IP1-204ENST00000616377 ABCC6O95255 1503 aa28.02■■■□□ 2.08
GTF2IP1-204ENST00000616377 NPHP1O15259 732 aa28.02■■■□□ 2.08
GTF2IP1-204ENST00000616377 LMBR1LQ6UX01 489 aa28.02■■■□□ 2.08
GTF2IP1-204ENST00000616377 LINC00301Q8NCQ3 95 aa28.02■■■□□ 2.08
GTF2IP1-204ENST00000616377 FAM53CQ9NYF3 392 aa28.02■■■□□ 2.08
GTF2IP1-204ENST00000616377 IFNKQ9P0W0 207 aa28.02■■■□□ 2.08
GTF2IP1-204ENST00000616377 NEDD4P46934 1319 aa28.02■■■□□ 2.08
GTF2IP1-204ENST00000616377 SMC2O95347 1197 aa28.01■■■□□ 2.07
GTF2IP1-204ENST00000616377 GPHNQ9NQX3 736 aaPredicted RBP28.01■■■□□ 2.07
GTF2IP1-204ENST00000616377 KDM6AO15550 1401 aaPredicted RBP28.01■■■□□ 2.07
GTF2IP1-204ENST00000616377 A0A1W2PQ27 194 aa28.01■■■□□ 2.07
GTF2IP1-204ENST00000616377 A0A1W2PQ64 194 aa28.01■■■□□ 2.07
GTF2IP1-204ENST00000616377 A0A1W2PQD8 194 aa28.01■■■□□ 2.07
GTF2IP1-204ENST00000616377 TIMM10P62072 90 aa28.01■■■□□ 2.07
GTF2IP1-204ENST00000616377 TMC6Q7Z403 805 aa28.01■■■□□ 2.07
GTF2IP1-204ENST00000616377 PPP1R13BQ96KQ4 1090 aa28.01■■■□□ 2.07
GTF2IP1-204ENST00000616377 KIF2AO00139 706 aaPredicted RBP28■■■□□ 2.07
GTF2IP1-204ENST00000616377 CASP7P55210 303 aa28■■■□□ 2.07
GTF2IP1-204ENST00000616377 TTLL5Q6EMB2 1281 aa28■■■□□ 2.07
GTF2IP1-204ENST00000616377 MAST3O60307 1309 aa27.99■■■□□ 2.07
GTF2IP1-204ENST00000616377 POLR3DP05423 398 aaPredicted RBP27.99■■■□□ 2.07
GTF2IP1-204ENST00000616377 TERF2Q15554 542 aa27.99■■■□□ 2.07
GTF2IP1-204ENST00000616377 BIN1O00499 593 aa27.99■■■□□ 2.07
GTF2IP1-204ENST00000616377 STK38Q15208 465 aa27.99■■■□□ 2.07
GTF2IP1-204ENST00000616377 SF3A1Q15459 793 aaKnown RBP27.99■■■□□ 2.07
GTF2IP1-204ENST00000616377 ATG9AQ7Z3C6 839 aa27.98■■■□□ 2.07
GTF2IP1-204ENST00000616377 ORAI2Q96SN7 254 aa27.98■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms