RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 WDHD1O75717 1129 aaPredicted RBP21.4■■□□□ 1.02
SPAST-203ENST00000615843 NUTM2AQ8IVF1 878 aaPredicted RBP21.4■■□□□ 1.02
SPAST-203ENST00000615843 PPM1EQ8WY54 764 aa21.4■■□□□ 1.02
SPAST-203ENST00000615843 PRDM11Q9NQV5 511 aa21.4■■□□□ 1.02
SPAST-203ENST00000615843 RASAL2Q9UJF2 1139 aa21.4■■□□□ 1.02
SPAST-203ENST00000615843 RBM5P52756 815 aaKnown RBP eCLIP21.4■■□□□ 1.02
SPAST-203ENST00000615843 B4GALNT4Q76KP1 1039 aa21.4■■□□□ 1.02
SPAST-203ENST00000615843 TRIM75PA6NK02 468 aa21.4■■□□□ 1.02
SPAST-203ENST00000615843 DZIP1Q86YF9 867 aaKnown RBP21.4■■□□□ 1.02
SPAST-203ENST00000615843 OTUD7AQ8TE49 926 aaPredicted RBP21.4■■□□□ 1.02
SPAST-203ENST00000615843 MMRN2Q9H8L6 949 aa21.4■■□□□ 1.02
SPAST-203ENST00000615843 LDHAL6AQ6ZMR3 332 aa21.39■■□□□ 1.02
SPAST-203ENST00000615843 KRT23Q9C075 422 aa21.39■■□□□ 1.02
SPAST-203ENST00000615843 CWC25Q9NXE8 425 aaPredicted RBP21.39■■□□□ 1.02
SPAST-203ENST00000615843 LUC7L2Q9Y383 392 aaKnown RBP21.39■■□□□ 1.02
SPAST-203ENST00000615843 OAS2P29728 719 aaKnown RBP21.39■■□□□ 1.01
SPAST-203ENST00000615843 JARID2Q92833 1246 aaPredicted RBP21.39■■□□□ 1.01
SPAST-203ENST00000615843 ALDH1L1O75891 902 aa21.39■■□□□ 1.01
SPAST-203ENST00000615843 ZBTB3Q9H5J0 574 aa21.39■■□□□ 1.01
SPAST-203ENST00000615843 TRMT112Q9UI30 125 aaKnown RBP21.39■■□□□ 1.01
SPAST-203ENST00000615843 RAD50Q92878 1312 aa21.39■■□□□ 1.01
SPAST-203ENST00000615843 TUBB2AQ13885 445 aa21.39■■□□□ 1.01
SPAST-203ENST00000615843 DHX32Q7L7V1 743 aaKnown RBP21.39■■□□□ 1.01
SPAST-203ENST00000615843 TUBB2BQ9BVA1 445 aa21.39■■□□□ 1.01
SPAST-203ENST00000615843 IMPACTQ9P2X3 320 aa21.39■■□□□ 1.01
SPAST-203ENST00000615843 PLB1Q6P1J6 1458 aa21.38■■□□□ 1.01
SPAST-203ENST00000615843 SOS1Q07889 1333 aaPredicted RBP21.38■■□□□ 1.01
SPAST-203ENST00000615843 NAA25Q14CX7 972 aa21.38■■□□□ 1.01
SPAST-203ENST00000615843 TNIP1Q15025 636 aa21.38■■□□□ 1.01
SPAST-203ENST00000615843 TMTC2Q8N394 836 aa21.38■■□□□ 1.01
SPAST-203ENST00000615843 NAPGQ99747 312 aaPredicted RBP21.38■■□□□ 1.01
SPAST-203ENST00000615843 PAIP2Q9BPZ3 127 aaKnown RBP21.38■■□□□ 1.01
SPAST-203ENST00000615843 ELP1O95163 1332 aa21.38■■□□□ 1.01
SPAST-203ENST00000615843 CUL7Q14999 1698 aa21.38■■□□□ 1.01
SPAST-203ENST00000615843 CCDC122Q5T0U0 273 aa21.38■■□□□ 1.01
SPAST-203ENST00000615843 KAT14Q9H8E8 782 aa21.38■■□□□ 1.01
SPAST-203ENST00000615843 PA2G4Q9UQ80 394 aaKnown RBP21.38■■□□□ 1.01
SPAST-203ENST00000615843 INPP5BP32019 993 aa21.38■■□□□ 1.01
SPAST-203ENST00000615843 A0A1B0GUA9 196 aa21.37■■□□□ 1.01
SPAST-203ENST00000615843 NDUFAB1O14561 156 aa21.37■■□□□ 1.01
SPAST-203ENST00000615843 POTEDQ86YR6 584 aa21.37■■□□□ 1.01
SPAST-203ENST00000615843 TTC14Q96N46 770 aa21.37■■□□□ 1.01
SPAST-203ENST00000615843 TSPY2A6NKD2 308 aa21.37■■□□□ 1.01
SPAST-203ENST00000615843 CCDC172P0C7W6 258 aa21.37■■□□□ 1.01
SPAST-203ENST00000615843 MEX3CQ5U5Q3 659 aaKnown RBP21.37■■□□□ 1.01
SPAST-203ENST00000615843 DDX12PQ92771 950 aa21.37■■□□□ 1.01
SPAST-203ENST00000615843 FAM173BQ6P4H8 233 aa21.37■■□□□ 1.01
SPAST-203ENST00000615843 CHST3Q7LGC8 479 aa21.37■■□□□ 1.01
SPAST-203ENST00000615843 HOMER2Q9NSB8 354 aa21.37■■□□□ 1.01
SPAST-203ENST00000615843 FANCCQ00597 558 aa21.37■■□□□ 1.01
SPAST-203ENST00000615843 GAS2L3Q86XJ1 694 aa21.37■■□□□ 1.01
SPAST-203ENST00000615843 PLVAPQ9BX97 442 aa21.37■■□□□ 1.01
SPAST-203ENST00000615843 GRM8O00222 908 aa21.36■■□□□ 1.01
SPAST-203ENST00000615843 SPATA24Q86W54 205 aa21.36■■□□□ 1.01
SPAST-203ENST00000615843 CNNM2Q9H8M5 875 aa21.36■■□□□ 1.01
SPAST-203ENST00000615843 ASIC1P78348 528 aa21.36■■□□□ 1.01
SPAST-203ENST00000615843 BICDL1Q6ZP65 573 aa21.36■■□□□ 1.01
SPAST-203ENST00000615843 CCDC77Q9BR77 488 aa21.36■■□□□ 1.01
SPAST-203ENST00000615843 SAMD15Q9P1V8 674 aa21.35■■□□□ 1.01
SPAST-203ENST00000615843 BRD1O95696 1058 aa21.35■■□□□ 1.01
SPAST-203ENST00000615843 NEBLO76041 1014 aa21.35■■□□□ 1.01
SPAST-203ENST00000615843 PDE4BQ07343 736 aa21.35■■□□□ 1.01
SPAST-203ENST00000615843 LMBR1Q8WVP7 490 aa21.35■■□□□ 1.01
SPAST-203ENST00000615843 TTF2Q9UNY4 1162 aaKnown RBP21.35■■□□□ 1.01
SPAST-203ENST00000615843 SNX14Q9Y5W7 946 aa21.35■■□□□ 1.01
SPAST-203ENST00000615843 HMGXB3Q12766 1538 aa21.35■■□□□ 1.01
SPAST-203ENST00000615843 GOLGA6CA6NDK9 693 aa21.34■■□□□ 1.01
SPAST-203ENST00000615843 GOLGA6DP0CG33 693 aa21.34■■□□□ 1.01
SPAST-203ENST00000615843 KRT13P13646 458 aa21.34■■□□□ 1.01
SPAST-203ENST00000615843 TNNC1P63316 161 aa21.34■■□□□ 1.01
SPAST-203ENST00000615843 IGSF22Q8N9C0 903 aa21.34■■□□□ 1.01
SPAST-203ENST00000615843 LEO1Q8WVC0 666 aaPredicted RBP21.34■■□□□ 1.01
SPAST-203ENST00000615843 GOLGA6AQ9NYA3 693 aa21.34■■□□□ 1.01
SPAST-203ENST00000615843 IKBKGQ9Y6K9 419 aa21.34■■□□□ 1.01
SPAST-203ENST00000615843 ANKRD13DQ6ZTN6 518 aa21.34■■□□□ 1.01
SPAST-203ENST00000615843 KRI1Q8N9T8 703 aaKnown RBP21.34■■□□□ 1.01
SPAST-203ENST00000615843 PRPHP41219 470 aa21.33■■□□□ 1.01
SPAST-203ENST00000615843 STXBP4Q6ZWJ1 553 aa21.33■■□□□ 1.01
SPAST-203ENST00000615843 VAT1LQ9HCJ6 419 aa21.33■■□□□ 1.01
SPAST-203ENST00000615843 MRC2Q9UBG0 1479 aa21.33■■□□□ 1.01
SPAST-203ENST00000615843 MSH6P52701 1360 aa21.33■■□□□ 1.01
SPAST-203ENST00000615843 RPS6KB1P23443 525 aa21.33■■□□□ 1.01
SPAST-203ENST00000615843 ZSCAN26Q16670 478 aa21.33■■□□□ 1.01
SPAST-203ENST00000615843 PAG1Q9NWQ8 432 aa21.33■■□□□ 1.01
SPAST-203ENST00000615843 TLDC2A0PJX2 215 aa21.33■■□□□ 1.01
SPAST-203ENST00000615843 TBC1D5Q92609 795 aa21.33■■□□□ 1.01
SPAST-203ENST00000615843 TMOD3Q9NYL9 352 aa21.33■■□□□ 1.01
SPAST-203ENST00000615843 UQCRFS1P1P0C7P4 283 aa21.33■■□□□ 1
SPAST-203ENST00000615843 ARHGAP6O43182 974 aa21.32■■□□□ 1
SPAST-203ENST00000615843 ARID5AQ03989 594 aa21.32■■□□□ 1
SPAST-203ENST00000615843 IDI1Q13907 227 aa21.32■■□□□ 1
SPAST-203ENST00000615843 KRT24Q2M2I5 525 aa21.32■■□□□ 1
SPAST-203ENST00000615843 MKRN1Q9UHC7 482 aaKnown RBP21.32■■□□□ 1
SPAST-203ENST00000615843 KSR2Q6VAB6 950 aa21.32■■□□□ 1
SPAST-203ENST00000615843 ESR2Q92731 530 aa21.32■■□□□ 1
SPAST-203ENST00000615843 TSGA10Q9BZW7 698 aa21.32■■□□□ 1
SPAST-203ENST00000615843 BICDL2A1A5D9 508 aa21.32■■□□□ 1
SPAST-203ENST00000615843 SMIM23A6NLE4 172 aa21.32■■□□□ 1
SPAST-203ENST00000615843 A6NNZ2 444 aa21.32■■□□□ 1
SPAST-203ENST00000615843 TUBB8Q3ZCM7 444 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms