RNA–Protein interactions for RNA: ENST00000613941.4

SRSF3-204, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 4

Gene SRSF3, Length 595 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-204ENST00000613941 SSC5DA1L4H1 1573 aa13.88□□□□□ -0.19
SRSF3-204ENST00000613941 WNT10BO00744 389 aa13.87□□□□□ -0.19
SRSF3-204ENST00000613941 SF3B3Q15393 1217 aaKnown RBP13.87□□□□□ -0.19
SRSF3-204ENST00000613941 LDLRAD1Q5T700 205 aa13.87□□□□□ -0.19
SRSF3-204ENST00000613941 WNK4Q96J92 1243 aa13.87□□□□□ -0.19
SRSF3-204ENST00000613941 GGA1Q9UJY5 639 aa13.87□□□□□ -0.19
SRSF3-204ENST00000613941 TIMELESSQ9UNS1 1208 aa13.87□□□□□ -0.19
SRSF3-204ENST00000613941 USP17L3A6NCW0 530 aa13.86□□□□□ -0.19
SRSF3-204ENST00000613941 USP17L4A6NCW7 530 aa13.86□□□□□ -0.19
SRSF3-204ENST00000613941 SP3Q02447 781 aa13.86□□□□□ -0.19
SRSF3-204ENST00000613941 USP17L1Q7RTZ2 530 aa13.86□□□□□ -0.19
SRSF3-204ENST00000613941 FBXW7Q969H0 707 aa13.86□□□□□ -0.19
SRSF3-204ENST00000613941 SEC31BQ9NQW1 1179 aa13.86□□□□□ -0.19
SRSF3-204ENST00000613941 PODXL2Q9NZ53 605 aa13.86□□□□□ -0.19
SRSF3-204ENST00000613941 WTIPA6NIX2 430 aaPredicted RBP13.85□□□□□ -0.19
SRSF3-204ENST00000613941 SOX1O00570 391 aaPredicted RBP13.85□□□□□ -0.19
SRSF3-204ENST00000613941 RPS8P62241 208 aaKnown RBP13.85□□□□□ -0.19
SRSF3-204ENST00000613941 SH3TC2Q8TF17 1288 aa13.85□□□□□ -0.19
SRSF3-204ENST00000613941 DPF3Q92784 378 aa13.85□□□□□ -0.19
SRSF3-204ENST00000613941 SLC10A4Q96EP9 437 aa13.85□□□□□ -0.19
SRSF3-204ENST00000613941 ATP5J2-PTCD1G3V325 749 aa13.84□□□□□ -0.19
SRSF3-204ENST00000613941 MNX1P50219 401 aaPredicted RBP13.84□□□□□ -0.19
SRSF3-204ENST00000613941 INHBEP58166 350 aa13.84□□□□□ -0.19
SRSF3-204ENST00000613941 LRCH3Q96II8 777 aa13.84□□□□□ -0.19
SRSF3-204ENST00000613941 MGAMO43451 1857 aa13.83□□□□□ -0.2
SRSF3-204ENST00000613941 ZBTB48P10074 688 aaPredicted RBP13.83□□□□□ -0.2
SRSF3-204ENST00000613941 GJA5P36382 358 aa13.83□□□□□ -0.2
SRSF3-204ENST00000613941 NBPF11Q86T75 865 aa13.83□□□□□ -0.2
SRSF3-204ENST00000613941 SHISA4Q96DD7 197 aa13.83□□□□□ -0.2
SRSF3-204ENST00000613941 PRO3102Q9H379 93 aa13.83□□□□□ -0.2
SRSF3-204ENST00000613941 TSPYL4Q9UJ04 414 aa13.83□□□□□ -0.2
SRSF3-204ENST00000613941 IRS4O14654 1257 aaPredicted RBP13.82□□□□□ -0.2
SRSF3-204ENST00000613941 APOBEC3FQ8IUX4 373 aaKnown RBP13.82□□□□□ -0.2
SRSF3-204ENST00000613941 PTPN18Q99952 460 aa13.82□□□□□ -0.2
SRSF3-204ENST00000613941 COL1A1P02452 1464 aaPredicted RBP13.81□□□□□ -0.2
SRSF3-204ENST00000613941 A0A1B0GUL6 1792 aa13.81□□□□□ -0.2
SRSF3-204ENST00000613941 DACT2Q5SW24 774 aa13.81□□□□□ -0.2
SRSF3-204ENST00000613941 OGFOD1Q8N543 542 aa13.81□□□□□ -0.2
SRSF3-204ENST00000613941 CCDC85AQ96PX6 553 aaPredicted RBP13.81□□□□□ -0.2
SRSF3-204ENST00000613941 ECM2O94769 699 aaPredicted RBP13.8□□□□□ -0.2
SRSF3-204ENST00000613941 OTUD7BQ6GQQ9 843 aa13.8□□□□□ -0.2
SRSF3-204ENST00000613941 PODNQ7Z5L7 613 aa13.8□□□□□ -0.2
SRSF3-204ENST00000613941 ISCA1Q9BUE6 129 aa13.8□□□□□ -0.2
SRSF3-204ENST00000613941 XDHP47989 1333 aa13.8□□□□□ -0.2
SRSF3-204ENST00000613941 ARAP2Q8WZ64 1704 aa13.79□□□□□ -0.2
SRSF3-204ENST00000613941 MTFR1Q15390 333 aa13.79□□□□□ -0.2
SRSF3-204ENST00000613941 MAP3K11Q16584 847 aa13.79□□□□□ -0.2
SRSF3-204ENST00000613941 KIAA0825Q8IV33 1275 aa13.79□□□□□ -0.2
SRSF3-204ENST00000613941 ARHGAP39Q9C0H5 1083 aa13.79□□□□□ -0.2
SRSF3-204ENST00000613941 PPP2R1AP30153 589 aa13.78□□□□□ -0.2
SRSF3-204ENST00000613941 NFE2L2Q16236 605 aa13.78□□□□□ -0.2
SRSF3-204ENST00000613941 KRT24Q2M2I5 525 aa13.78□□□□□ -0.2
SRSF3-204ENST00000613941 DEFB129Q9H1M3 183 aa13.78□□□□□ -0.2
SRSF3-204ENST00000613941 CHPF2Q9P2E5 772 aa13.78□□□□□ -0.2
SRSF3-204ENST00000613941 PPP1R12BO60237 982 aaPredicted RBP13.77□□□□□ -0.21
SRSF3-204ENST00000613941 NEFMP07197 916 aa13.77□□□□□ -0.21
SRSF3-204ENST00000613941 TAF1CQ15572 869 aaPredicted RBP13.77□□□□□ -0.21
SRSF3-204ENST00000613941 PLBD2Q8NHP8 589 aa13.77□□□□□ -0.21
SRSF3-204ENST00000613941 MYO3BQ8WXR4 1341 aa13.77□□□□□ -0.21
SRSF3-204ENST00000613941 COL25A1Q9BXS0 654 aaPredicted RBP13.77□□□□□ -0.21
SRSF3-204ENST00000613941 MED23Q9ULK4 1368 aa13.77□□□□□ -0.21
SRSF3-204ENST00000613941 PCDHAC2Q9Y5I4 1007 aa13.77□□□□□ -0.21
SRSF3-204ENST00000613941 ATP2B4P23634 1241 aa13.76□□□□□ -0.21
SRSF3-204ENST00000613941 JARID2Q92833 1246 aaPredicted RBP13.76□□□□□ -0.21
SRSF3-204ENST00000613941 ZBED3Q96IU2 234 aaPredicted RBP13.76□□□□□ -0.21
SRSF3-204ENST00000613941 ELP3Q9H9T3 547 aa13.76□□□□□ -0.21
SRSF3-204ENST00000613941 VCANP13611 3396 aa13.76□□□□□ -0.21
SRSF3-204ENST00000613941 TESPA1A2RU30 521 aaPredicted RBP13.75□□□□□ -0.21
SRSF3-204ENST00000613941 ZBTB7BO15156 539 aaPredicted RBP13.75□□□□□ -0.21
SRSF3-204ENST00000613941 NBPF12Q5TAG4 269 aaPredicted RBP13.75□□□□□ -0.21
SRSF3-204ENST00000613941 STRIP1Q5VSL9 837 aa13.75□□□□□ -0.21
SRSF3-204ENST00000613941 ANKRD13DQ6ZTN6 518 aa13.75□□□□□ -0.21
SRSF3-204ENST00000613941 Q7L0L9 218 aa13.75□□□□□ -0.21
SRSF3-204ENST00000613941 TXNRD3Q86VQ6 643 aa13.75□□□□□ -0.21
SRSF3-204ENST00000613941 CNKSR2Q8WXI2 1034 aa13.75□□□□□ -0.21
SRSF3-204ENST00000613941 BRI3BPQ8WY22 251 aa13.75□□□□□ -0.21
SRSF3-204ENST00000613941 OPTNQ96CV9 577 aa13.75□□□□□ -0.21
SRSF3-204ENST00000613941 PLEKHF1Q96S99 279 aa13.75□□□□□ -0.21
SRSF3-204ENST00000613941 EYSQ5T1H1 3165 aa13.75□□□□□ -0.21
SRSF3-204ENST00000613941 AOX1Q06278 1338 aa13.74□□□□□ -0.21
SRSF3-204ENST00000613941 CLRN2A0PK11 232 aa13.74□□□□□ -0.21
SRSF3-204ENST00000613941 USP2O75604 605 aaPredicted RBP13.74□□□□□ -0.21
SRSF3-204ENST00000613941 ARHGEF6Q15052 776 aa13.74□□□□□ -0.21
SRSF3-204ENST00000613941 ANKRD18AQ8IVF6 992 aa13.74□□□□□ -0.21
SRSF3-204ENST00000613941 MS4A4AQ96JQ5 239 aa13.74□□□□□ -0.21
SRSF3-204ENST00000613941 HTATIP2Q9BUP3 242 aa13.74□□□□□ -0.21
SRSF3-204ENST00000613941 ZFYVE28Q9HCC9 887 aa13.74□□□□□ -0.21
SRSF3-204ENST00000613941 CCL15-CCL14A0A0B4J2E2 113 aa13.73□□□□□ -0.21
SRSF3-204ENST00000613941 IREB2P48200 963 aaKnown RBP13.73□□□□□ -0.21
SRSF3-204ENST00000613941 CCL15Q16663 113 aa13.73□□□□□ -0.21
SRSF3-204ENST00000613941 CCDC152Q4G0S7 254 aa13.73□□□□□ -0.21
SRSF3-204ENST00000613941 TTLL5Q6EMB2 1281 aa13.73□□□□□ -0.21
SRSF3-204ENST00000613941 UBE2Q1Q7Z7E8 422 aa13.73□□□□□ -0.21
SRSF3-204ENST00000613941 FAM43AQ8N2R8 423 aa13.73□□□□□ -0.21
SRSF3-204ENST00000613941 NR2E3Q9Y5X4 410 aa13.73□□□□□ -0.21
SRSF3-204ENST00000613941 KLRK1P26718 216 aa13.72□□□□□ -0.21
SRSF3-204ENST00000613941 DLGAP5Q15398 846 aa13.72□□□□□ -0.21
SRSF3-204ENST00000613941 ANKRD13AQ8IZ07 590 aa13.72□□□□□ -0.21
SRSF3-204ENST00000613941 DEFB123Q8N688 67 aa13.72□□□□□ -0.21
SRSF3-204ENST00000613941 ZBTB38Q8NAP3 1195 aaPredicted RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 118.5 ms