RNA–Protein interactions for RNA: ENST00000610462.1

CSPG5-205, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 5 BASIC

Gene CSPG5, Length 2,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-205ENST00000610462 OSBP2Q969R2 916 aa33.33■■■□□ 2.93
CSPG5-205ENST00000610462 TMEM63CQ9P1W3 806 aa33.33■■■□□ 2.93
CSPG5-205ENST00000610462 PDE8BO95263 885 aa33.33■■■□□ 2.93
CSPG5-205ENST00000610462 Q6ZUG5 572 aa33.33■■■□□ 2.93
CSPG5-205ENST00000610462 ZNF831Q5JPB2 1677 aa33.33■■■□□ 2.93
CSPG5-205ENST00000610462 PARP10Q53GL7 1025 aa33.32■■■□□ 2.92
CSPG5-205ENST00000610462 UTP14AQ9BVJ6 771 aaKnown RBP33.32■■■□□ 2.92
CSPG5-205ENST00000610462 DDX60Q8IY21 1712 aaKnown RBP33.32■■■□□ 2.92
CSPG5-205ENST00000610462 GDPD2Q9HCC8 539 aa33.32■■■□□ 2.92
CSPG5-205ENST00000610462 ARAP2Q8WZ64 1704 aa33.31■■■□□ 2.92
CSPG5-205ENST00000610462 LAMB2P55268 1798 aa33.31■■■□□ 2.92
CSPG5-205ENST00000610462 DTNBO60941 627 aa33.3■■■□□ 2.92
CSPG5-205ENST00000610462 CNPY2Q9Y2B0 182 aa33.3■■■□□ 2.92
CSPG5-205ENST00000610462 MROH5Q6ZUA9 1318 aa33.29■■■□□ 2.92
CSPG5-205ENST00000610462 PDCP20941 246 aa33.29■■■□□ 2.92
CSPG5-205ENST00000610462 MCAMP43121 646 aa33.29■■■□□ 2.92
CSPG5-205ENST00000610462 LARP1BQ659C4 914 aaKnown RBP33.29■■■□□ 2.92
CSPG5-205ENST00000610462 DHX32Q7L7V1 743 aaKnown RBP33.29■■■□□ 2.92
CSPG5-205ENST00000610462 KCNQ2O43526 872 aa33.29■■■□□ 2.92
CSPG5-205ENST00000610462 WASHC4Q2M389 1173 aa33.29■■■□□ 2.92
CSPG5-205ENST00000610462 APPBP2Q92624 585 aa33.29■■■□□ 2.92
CSPG5-205ENST00000610462 BCORQ6W2J9 1755 aa33.28■■■□□ 2.92
CSPG5-205ENST00000610462 GADD45BO75293 160 aaPredicted RBP33.28■■■□□ 2.92
CSPG5-205ENST00000610462 HCLS1P14317 486 aaPredicted RBP33.28■■■□□ 2.92
CSPG5-205ENST00000610462 PI16Q6UXB8 463 aa33.28■■■□□ 2.92
CSPG5-205ENST00000610462 GTF3C6Q969F1 213 aa33.28■■■□□ 2.92
CSPG5-205ENST00000610462 STK3Q13188 491 aa33.27■■■□□ 2.92
CSPG5-205ENST00000610462 VPS37CA5D8V6 355 aaPredicted RBP33.27■■■□□ 2.92
CSPG5-205ENST00000610462 E7EWF7 191 aa33.26■■■□□ 2.92
CSPG5-205ENST00000610462 FAM98CQ17RN3 349 aaKnown RBP33.26■■■□□ 2.92
CSPG5-205ENST00000610462 DDX24Q9GZR7 859 aaKnown RBP eCLIP33.26■■■□□ 2.92
CSPG5-205ENST00000610462 PUM3Q15397 648 aaKnown RBP33.25■■■□□ 2.91
CSPG5-205ENST00000610462 SYAP1Q96A49 352 aaPredicted RBP33.25■■■□□ 2.91
CSPG5-205ENST00000610462 CTNNA3Q9UI47 895 aa33.25■■■□□ 2.91
CSPG5-205ENST00000610462 FAM177BA6PVY3 158 aa33.25■■■□□ 2.91
CSPG5-205ENST00000610462 FGFR2P21802 821 aa33.25■■■□□ 2.91
CSPG5-205ENST00000610462 EXOSC10Q01780 885 aaKnown RBP33.25■■■□□ 2.91
CSPG5-205ENST00000610462 TTF1Q15361 905 aaPredicted RBP33.25■■■□□ 2.91
CSPG5-205ENST00000610462 LPIN2Q92539 896 aa33.25■■■□□ 2.91
CSPG5-205ENST00000610462 A0A0G2JLW4 131 aa33.24■■■□□ 2.91
CSPG5-205ENST00000610462 HSP90B1P14625 803 aaKnown RBP33.24■■■□□ 2.91
CSPG5-205ENST00000610462 VPS72Q15906 364 aa33.24■■■□□ 2.91
CSPG5-205ENST00000610462 ZSCAN25Q6NSZ9 544 aa33.24■■■□□ 2.91
CSPG5-205ENST00000610462 BRF1Q92994 677 aa33.24■■■□□ 2.91
CSPG5-205ENST00000610462 NTSR2O95665 410 aa33.24■■■□□ 2.91
CSPG5-205ENST00000610462 UQCRFS1P1P0C7P4 283 aa33.24■■■□□ 2.91
CSPG5-205ENST00000610462 ARID4AP29374 1257 aaPredicted RBP33.24■■■□□ 2.91
CSPG5-205ENST00000610462 LRSAM1Q6UWE0 723 aa33.24■■■□□ 2.91
CSPG5-205ENST00000610462 NIP7Q9Y221 180 aaKnown RBP eCLIP33.24■■■□□ 2.91
CSPG5-205ENST00000610462 MYO5AQ9Y4I1 1855 aaKnown RBP33.23■■■□□ 2.91
CSPG5-205ENST00000610462 CCDC102BQ68D86 513 aa33.23■■■□□ 2.91
CSPG5-205ENST00000610462 BCL9LQ86UU0 1499 aa33.23■■■□□ 2.91
CSPG5-205ENST00000610462 FOXP2O15409 715 aa33.22■■■□□ 2.91
CSPG5-205ENST00000610462 NASPP49321 788 aaPredicted RBP33.22■■■□□ 2.91
CSPG5-205ENST00000610462 FGD1P98174 961 aa33.22■■■□□ 2.91
CSPG5-205ENST00000610462 CSPP1Q1MSJ5 1256 aa33.22■■■□□ 2.91
CSPG5-205ENST00000610462 LRRC2Q9BYS8 371 aa33.22■■■□□ 2.91
CSPG5-205ENST00000610462 AGXT2Q9BYV1 514 aa33.22■■■□□ 2.91
CSPG5-205ENST00000610462 RTL9Q8NET4 1388 aa33.22■■■□□ 2.91
CSPG5-205ENST00000610462 PUS7LQ9H0K6 701 aaKnown RBP33.22■■■□□ 2.91
CSPG5-205ENST00000610462 CCDC152Q4G0S7 254 aa33.21■■■□□ 2.91
CSPG5-205ENST00000610462 TTLL5Q6EMB2 1281 aa33.21■■■□□ 2.91
CSPG5-205ENST00000610462 ZNF652Q9Y2D9 606 aa33.21■■■□□ 2.91
CSPG5-205ENST00000610462 SYCE3A1L190 88 aa33.21■■■□□ 2.91
CSPG5-205ENST00000610462 PHKA1P46020 1223 aa33.21■■■□□ 2.91
CSPG5-205ENST00000610462 FAM43AQ8N2R8 423 aa33.21■■■□□ 2.91
CSPG5-205ENST00000610462 NGLY1Q96IV0 654 aa33.21■■■□□ 2.91
CSPG5-205ENST00000610462 ADD2P35612 726 aa33.2■■■□□ 2.91
CSPG5-205ENST00000610462 UBE2HP62256 183 aa33.2■■■□□ 2.91
CSPG5-205ENST00000610462 DNM1Q05193 864 aaKnown RBP33.2■■■□□ 2.91
CSPG5-205ENST00000610462 HELBQ8NG08 1087 aaPredicted RBP33.2■■■□□ 2.91
CSPG5-205ENST00000610462 C8orf37Q96NL8 207 aa33.2■■■□□ 2.91
CSPG5-205ENST00000610462 MPHOSPH8Q99549 860 aa33.2■■■□□ 2.91
CSPG5-205ENST00000610462 PFKFB2O60825 505 aa33.19■■■□□ 2.9
CSPG5-205ENST00000610462 CDC37L1Q7L3B6 337 aa33.19■■■□□ 2.9
CSPG5-205ENST00000610462 SEC31BQ9NQW1 1179 aa33.19■■■□□ 2.9
CSPG5-205ENST00000610462 SLC5A1P13866 664 aa33.19■■■□□ 2.9
CSPG5-205ENST00000610462 ATRNO75882 1429 aa33.18■■■□□ 2.9
CSPG5-205ENST00000610462 GPAA1O43292 621 aa33.18■■■□□ 2.9
CSPG5-205ENST00000610462 FIBPO43427 364 aa33.18■■■□□ 2.9
CSPG5-205ENST00000610462 IMMTQ16891 758 aaKnown RBP33.18■■■□□ 2.9
CSPG5-205ENST00000610462 PIH1D3Q9NQM4 214 aaKnown RBP33.18■■■□□ 2.9
CSPG5-205ENST00000610462 UBAP1LF5GYI3 381 aa33.17■■■□□ 2.9
CSPG5-205ENST00000610462 CLEC4GQ6UXB4 293 aa33.17■■■□□ 2.9
CSPG5-205ENST00000610462 RBSNQ9H1K0 784 aa33.17■■■□□ 2.9
CSPG5-205ENST00000610462 FGAP02671 866 aa33.17■■■□□ 2.9
CSPG5-205ENST00000610462 SCRN1Q12765 414 aa33.17■■■□□ 2.9
CSPG5-205ENST00000610462 LINC00116Q8NCU8 138 aa33.17■■■□□ 2.9
CSPG5-205ENST00000610462 LLPHQ9BRT6 129 aaKnown RBP33.17■■■□□ 2.9
CSPG5-205ENST00000610462 JAK2O60674 1132 aa33.16■■■□□ 2.9
CSPG5-205ENST00000610462 UBE3CQ15386 1083 aa33.16■■■□□ 2.9
CSPG5-205ENST00000610462 SLC9C2Q5TAH2 1124 aa33.16■■■□□ 2.9
CSPG5-205ENST00000610462 APOBRQ0VD83 1088 aa33.15■■■□□ 2.9
CSPG5-205ENST00000610462 FBXL16Q8N461 479 aa33.15■■■□□ 2.9
CSPG5-205ENST00000610462 DOCK2Q92608 1830 aa33.14■■■□□ 2.9
CSPG5-205ENST00000610462 PHF14O94880 888 aa33.14■■■□□ 2.9
CSPG5-205ENST00000610462 IGHMBP2P38935 993 aaKnown RBP33.14■■■□□ 2.9
CSPG5-205ENST00000610462 SMARCC2Q8TAQ2 1214 aa33.14■■■□□ 2.9
CSPG5-205ENST00000610462 IDH1O75874 414 aaKnown RBP33.13■■■□□ 2.89
CSPG5-205ENST00000610462 FERMT3Q86UX7 667 aa33.12■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 121 ms