RNA–Protein interactions for RNA: ENST00000608461.1

HDDC2-206, Transcript of HD domain containing 2, humanhuman

TSL 2

Gene HDDC2, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-206ENST00000608461 USP17L1Q7RTZ2 530 aa17.8■□□□□ 0.44
HDDC2-206ENST00000608461 ITPRIPQ8IWB1 547 aa17.8■□□□□ 0.44
HDDC2-206ENST00000608461 AGBL3Q8NEM8 1001 aa17.8■□□□□ 0.44
HDDC2-206ENST00000608461 HELBQ8NG08 1087 aaPredicted RBP17.8■□□□□ 0.44
HDDC2-206ENST00000608461 PUS3Q9BZE2 481 aaKnown RBP17.8■□□□□ 0.44
HDDC2-206ENST00000608461 COPRSQ9NQ92 184 aa17.8■□□□□ 0.44
HDDC2-206ENST00000608461 ADARB2Q9NS39 739 aaKnown RBP17.8■□□□□ 0.44
HDDC2-206ENST00000608461 IRS2Q9Y4H2 1338 aa17.79■□□□□ 0.44
HDDC2-206ENST00000608461 WTIPA6NIX2 430 aaPredicted RBP17.79■□□□□ 0.44
HDDC2-206ENST00000608461 ZBTB7BO15156 539 aaPredicted RBP17.79■□□□□ 0.44
HDDC2-206ENST00000608461 GMPSP49915 693 aaPredicted RBP17.79■□□□□ 0.44
HDDC2-206ENST00000608461 LRRC24Q50LG9 513 aa17.79■□□□□ 0.44
HDDC2-206ENST00000608461 METTL24Q5JXM2 366 aa17.79■□□□□ 0.44
HDDC2-206ENST00000608461 STRIP1Q5VSL9 837 aa17.79■□□□□ 0.44
HDDC2-206ENST00000608461 CHADLQ6NUI6 762 aa17.79■□□□□ 0.44
HDDC2-206ENST00000608461 ZNF804AQ7Z570 1209 aa17.79■□□□□ 0.44
HDDC2-206ENST00000608461 MYO3BQ8WXR4 1341 aa17.78■□□□□ 0.44
HDDC2-206ENST00000608461 H7C1D1 291 aa17.78■□□□□ 0.44
HDDC2-206ENST00000608461 SRGAP3O43295 1099 aa17.78■□□□□ 0.44
HDDC2-206ENST00000608461 PLIN1O60240 522 aa17.78■□□□□ 0.44
HDDC2-206ENST00000608461 RLBP1P12271 317 aa17.78■□□□□ 0.44
HDDC2-206ENST00000608461 EPS15P42566 896 aa17.78■□□□□ 0.44
HDDC2-206ENST00000608461 PDE3AQ14432 1141 aa17.78■□□□□ 0.44
HDDC2-206ENST00000608461 TXNRD3Q86VQ6 643 aa17.78■□□□□ 0.44
HDDC2-206ENST00000608461 VGLL2Q8N8G2 317 aa17.78■□□□□ 0.44
HDDC2-206ENST00000608461 CD209Q9NNX6 404 aa17.78■□□□□ 0.44
HDDC2-206ENST00000608461 CNOT7Q9UIV1 285 aaKnown RBP17.78■□□□□ 0.44
HDDC2-206ENST00000608461 SCN9AQ15858 1988 aa17.78■□□□□ 0.44
HDDC2-206ENST00000608461 IL1R1P14778 569 aa17.77■□□□□ 0.44
HDDC2-206ENST00000608461 IL15P40933 162 aaPredicted RBP17.77■□□□□ 0.44
HDDC2-206ENST00000608461 RSBN1LQ6PCB5 846 aaPredicted RBP17.77■□□□□ 0.44
HDDC2-206ENST00000608461 KLHDC4Q8TBB5 520 aa17.77■□□□□ 0.44
HDDC2-206ENST00000608461 KCNQ5Q9NR82 932 aa17.77■□□□□ 0.44
HDDC2-206ENST00000608461 ADAMTSL1Q8N6G6 1762 aa17.76■□□□□ 0.43
HDDC2-206ENST00000608461 HSPA6P17066 643 aa17.76■□□□□ 0.43
HDDC2-206ENST00000608461 PUM3Q15397 648 aaKnown RBP17.76■□□□□ 0.43
HDDC2-206ENST00000608461 ATG9AQ7Z3C6 839 aa17.76■□□□□ 0.43
HDDC2-206ENST00000608461 ZC3H15Q8WU90 426 aaKnown RBP17.76■□□□□ 0.43
HDDC2-206ENST00000608461 DDX19BQ9UMR2 479 aa17.76■□□□□ 0.43
HDDC2-206ENST00000608461 KLRK1P26718 216 aa17.75■□□□□ 0.43
HDDC2-206ENST00000608461 MVPQ14764 893 aaKnown RBP17.75■□□□□ 0.43
HDDC2-206ENST00000608461 EAPPQ56P03 285 aaPredicted RBP17.75■□□□□ 0.43
HDDC2-206ENST00000608461 CAVIN4Q5BKX8 364 aa17.75■□□□□ 0.43
HDDC2-206ENST00000608461 TTLL5Q6EMB2 1281 aa17.75■□□□□ 0.43
HDDC2-206ENST00000608461 PANK1Q8TE04 598 aa17.75■□□□□ 0.43
HDDC2-206ENST00000608461 CEP126Q9P2H0 1117 aa17.75■□□□□ 0.43
HDDC2-206ENST00000608461 ZBTB12Q9Y330 459 aaPredicted RBP17.75■□□□□ 0.43
HDDC2-206ENST00000608461 SNAP23O00161 211 aa17.74■□□□□ 0.43
HDDC2-206ENST00000608461 SASH1O94885 1247 aa17.74■□□□□ 0.43
HDDC2-206ENST00000608461 IFIT1P09914 478 aaKnown RBP17.74■□□□□ 0.43
HDDC2-206ENST00000608461 HIBADHP31937 336 aaKnown RBP17.74■□□□□ 0.43
HDDC2-206ENST00000608461 FKBP1AP62942 108 aaKnown RBP17.74■□□□□ 0.43
HDDC2-206ENST00000608461 ATP8B2P98198 1209 aa17.74■□□□□ 0.43
HDDC2-206ENST00000608461 DACT2Q5SW24 774 aa17.74■□□□□ 0.43
HDDC2-206ENST00000608461 MICALL2Q8IY33 904 aa17.74■□□□□ 0.43
HDDC2-206ENST00000608461 LPIN2Q92539 896 aa17.74■□□□□ 0.43
HDDC2-206ENST00000608461 YTHDC1Q96MU7 727 aaKnown RBP17.74■□□□□ 0.43
HDDC2-206ENST00000608461 GMLQ99445 158 aa17.74■□□□□ 0.43
HDDC2-206ENST00000608461 PGAP2Q9UHJ9 254 aa17.74■□□□□ 0.43
HDDC2-206ENST00000608461 CLEC11AQ9Y240 323 aa17.74■□□□□ 0.43
HDDC2-206ENST00000608461 FGFR2P21802 821 aa17.73■□□□□ 0.43
HDDC2-206ENST00000608461 APLP1P51693 650 aa17.73■□□□□ 0.43
HDDC2-206ENST00000608461 ZNF280AP59817 542 aaPredicted RBP17.73■□□□□ 0.43
HDDC2-206ENST00000608461 SSH3Q8TE77 659 aa17.73■□□□□ 0.43
HDDC2-206ENST00000608461 FAM84BQ96KN1 310 aaPredicted RBP17.73■□□□□ 0.43
HDDC2-206ENST00000608461 USP17L8P0C7I0 530 aa17.72■□□□□ 0.43
HDDC2-206ENST00000608461 POTEIP0CG38 1075 aa17.72■□□□□ 0.43
HDDC2-206ENST00000608461 POTEJP0CG39 1038 aa17.72■□□□□ 0.43
HDDC2-206ENST00000608461 SLC5A1P13866 664 aa17.72■□□□□ 0.43
HDDC2-206ENST00000608461 POLA2Q14181 598 aa17.72■□□□□ 0.43
HDDC2-206ENST00000608461 FBXO33Q7Z6M2 555 aa17.72■□□□□ 0.43
HDDC2-206ENST00000608461 VPS37DQ86XT2 251 aa17.72■□□□□ 0.43
HDDC2-206ENST00000608461 OGFOD1Q8N543 542 aa17.72■□□□□ 0.43
HDDC2-206ENST00000608461 TDRD7Q8NHU6 1098 aaKnown RBP17.72■□□□□ 0.43
HDDC2-206ENST00000608461 SIL1Q9H173 461 aa17.72■□□□□ 0.43
HDDC2-206ENST00000608461 ZNF646O15015 1829 aaPredicted RBP17.71■□□□□ 0.43
HDDC2-206ENST00000608461 PNMA6EA0A0J9YXQ4 647 aa17.71■□□□□ 0.43
HDDC2-206ENST00000608461 ZBTB22O15209 634 aa17.71■□□□□ 0.43
HDDC2-206ENST00000608461 GTF2IP78347 998 aa17.71■□□□□ 0.43
HDDC2-206ENST00000608461 PA2G4Q9UQ80 394 aaKnown RBP17.71■□□□□ 0.43
HDDC2-206ENST00000608461 AKAP2Q9Y2D5 859 aa17.71■□□□□ 0.43
HDDC2-206ENST00000608461 FAM205AQ6ZU69 1335 aa17.71■□□□□ 0.42
HDDC2-206ENST00000608461 ITGBL1O95965 494 aaPredicted RBP17.7■□□□□ 0.42
HDDC2-206ENST00000608461 G3BP1Q13283 466 aaKnown RBP eCLIP17.7■□□□□ 0.42
HDDC2-206ENST00000608461 CNTROBQ8N137 903 aa17.7■□□□□ 0.42
HDDC2-206ENST00000608461 GYG1P46976 350 aa17.69■□□□□ 0.42
HDDC2-206ENST00000608461 ATP2B3Q16720 1220 aa17.69■□□□□ 0.42
HDDC2-206ENST00000608461 RPAP2Q8IXW5 612 aaPredicted RBP17.69■□□□□ 0.42
HDDC2-206ENST00000608461 ZBTB40Q9NUA8 1239 aa17.69■□□□□ 0.42
HDDC2-206ENST00000608461 HDAC9Q9UKV0 1011 aa17.69■□□□□ 0.42
HDDC2-206ENST00000608461 COG6Q9Y2V7 657 aa17.69■□□□□ 0.42
HDDC2-206ENST00000608461 PASKQ96RG2 1323 aa17.69■□□□□ 0.42
HDDC2-206ENST00000608461 HIRAP54198 1017 aaPredicted RBP17.68■□□□□ 0.42
HDDC2-206ENST00000608461 SAMD7Q7Z3H4 446 aa17.68■□□□□ 0.42
HDDC2-206ENST00000608461 TBC1D22AQ8WUA7 517 aa17.68■□□□□ 0.42
HDDC2-206ENST00000608461 FBXW7Q969H0 707 aa17.68■□□□□ 0.42
HDDC2-206ENST00000608461 MYOZ2Q9NPC6 264 aa17.68■□□□□ 0.42
HDDC2-206ENST00000608461 NOP58Q9Y2X3 529 aaKnown RBP17.68■□□□□ 0.42
HDDC2-206ENST00000608461 KIF4BQ2VIQ3 1234 aa17.67■□□□□ 0.42
HDDC2-206ENST00000608461 MAP1SQ66K74 1059 aaPredicted RBP17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms