RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 TNNI3KQ59H18 835 aa9.47□□□□□ -0.89
MSH6-211ENST00000606499 SOGA3Q5TF21 947 aa9.47□□□□□ -0.89
MSH6-211ENST00000606499 ANKRD45Q5TZF3 282 aa9.47□□□□□ -0.89
MSH6-211ENST00000606499 CC2D2BQ6DHV5 1058 aa9.47□□□□□ -0.89
MSH6-211ENST00000606499 TXNRD3Q86VQ6 643 aa9.47□□□□□ -0.89
MSH6-211ENST00000606499 RTKN2Q8IZC4 609 aa9.47□□□□□ -0.89
MSH6-211ENST00000606499 EAF2Q96CJ1 260 aaPredicted RBP9.47□□□□□ -0.89
MSH6-211ENST00000606499 LNPKQ9C0E8 428 aa9.47□□□□□ -0.89
MSH6-211ENST00000606499 FPGT-TNNI3KV9GXZ4 949 aa9.47□□□□□ -0.89
MSH6-211ENST00000606499 IRS2Q9Y4H2 1338 aa9.47□□□□□ -0.89
MSH6-211ENST00000606499 MED23Q9ULK4 1368 aa9.47□□□□□ -0.89
MSH6-211ENST00000606499 PSME4Q14997 1843 aa9.47□□□□□ -0.89
MSH6-211ENST00000606499 ATP2B4P23634 1241 aa9.46□□□□□ -0.9
MSH6-211ENST00000606499 PRELPP51888 382 aa9.46□□□□□ -0.9
MSH6-211ENST00000606499 NUCB1Q02818 461 aa9.46□□□□□ -0.9
MSH6-211ENST00000606499 UBE4AQ14139 1066 aa9.46□□□□□ -0.9
MSH6-211ENST00000606499 GPR162Q16538 588 aa9.46□□□□□ -0.9
MSH6-211ENST00000606499 AACSQ86V21 672 aa9.46□□□□□ -0.9
MSH6-211ENST00000606499 SKAP1Q86WV1 359 aa9.46□□□□□ -0.9
MSH6-211ENST00000606499 LPIN2Q92539 896 aa9.46□□□□□ -0.9
MSH6-211ENST00000606499 NEUROD6Q96NK8 337 aa9.46□□□□□ -0.9
MSH6-211ENST00000606499 PSMD1Q99460 953 aa9.46□□□□□ -0.9
MSH6-211ENST00000606499 DBNDD2Q9BQY9 259 aa9.46□□□□□ -0.9
MSH6-211ENST00000606499 RTFDC1Q9BY42 306 aaPredicted RBP9.46□□□□□ -0.9
MSH6-211ENST00000606499 CCDC8Q9H0W5 538 aaPredicted RBP9.46□□□□□ -0.9
MSH6-211ENST00000606499 GPR108Q9NPR9 543 aa9.46□□□□□ -0.9
MSH6-211ENST00000606499 ZNF277Q9NRM2 450 aaPredicted RBP9.46□□□□□ -0.9
MSH6-211ENST00000606499 DBNLQ9UJU6 430 aaKnown RBP9.46□□□□□ -0.9
MSH6-211ENST00000606499 AKAP2Q9Y2D5 859 aa9.46□□□□□ -0.9
MSH6-211ENST00000606499 LEMD3Q9Y2U8 911 aa9.46□□□□□ -0.9
MSH6-211ENST00000606499 CHD4Q14839 1912 aa9.45□□□□□ -0.9
MSH6-211ENST00000606499 SCN9AQ15858 1988 aa9.45□□□□□ -0.9
MSH6-211ENST00000606499 RIMBP2O15034 1052 aa9.45□□□□□ -0.9
MSH6-211ENST00000606499 SLC5A1P13866 664 aa9.45□□□□□ -0.9
MSH6-211ENST00000606499 GYG1P46976 350 aa9.45□□□□□ -0.9
MSH6-211ENST00000606499 AOC3Q16853 763 aa9.45□□□□□ -0.9
MSH6-211ENST00000606499 GRIPAP1Q4V328 841 aa9.45□□□□□ -0.9
MSH6-211ENST00000606499 ARHGAP27Q6ZUM4 889 aa9.45□□□□□ -0.9
MSH6-211ENST00000606499 CHD1LQ86WJ1 897 aa9.45□□□□□ -0.9
MSH6-211ENST00000606499 C16orf71Q8IYS4 520 aaPredicted RBP9.45□□□□□ -0.9
MSH6-211ENST00000606499 CLASRPQ8N2M8 674 aaKnown RBP9.45□□□□□ -0.9
MSH6-211ENST00000606499 OTUD7AQ8TE49 926 aaPredicted RBP9.45□□□□□ -0.9
MSH6-211ENST00000606499 XAGE2Q96GT9 111 aa9.45□□□□□ -0.9
MSH6-211ENST00000606499 TAOK3Q9H2K8 898 aa9.45□□□□□ -0.9
MSH6-211ENST00000606499 LTBP3Q9NS15 1303 aa9.45□□□□□ -0.9
MSH6-211ENST00000606499 COL1A1P02452 1464 aaPredicted RBP9.45□□□□□ -0.9
MSH6-211ENST00000606499 AKAP11Q9UKA4 1901 aa9.44□□□□□ -0.9
MSH6-211ENST00000606499 PPIP5K2O43314 1243 aa9.44□□□□□ -0.9
MSH6-211ENST00000606499 IFIT2P09913 472 aaKnown RBP9.44□□□□□ -0.9
MSH6-211ENST00000606499 IFIT1P09914 478 aaKnown RBP9.44□□□□□ -0.9
MSH6-211ENST00000606499 PDE4AP27815 886 aa9.44□□□□□ -0.9
MSH6-211ENST00000606499 WASHC4Q2M389 1173 aa9.44□□□□□ -0.9
MSH6-211ENST00000606499 TSHZ3Q63HK5 1081 aa9.44□□□□□ -0.9
MSH6-211ENST00000606499 SUPT20HQ8NEM7 779 aa9.44□□□□□ -0.9
MSH6-211ENST00000606499 EYA3Q99504 573 aa9.44□□□□□ -0.9
MSH6-211ENST00000606499 ZBTB47Q9UFB7 747 aaPredicted RBP9.44□□□□□ -0.9
MSH6-211ENST00000606499 SALL3Q9BXA9 1300 aa9.44□□□□□ -0.9
MSH6-211ENST00000606499 MYO5AQ9Y4I1 1855 aaKnown RBP9.43□□□□□ -0.9
MSH6-211ENST00000606499 DOCK2Q92608 1830 aa9.43□□□□□ -0.9
MSH6-211ENST00000606499 MAST2Q6P0Q8 1798 aa9.43□□□□□ -0.9
MSH6-211ENST00000606499 IARSP41252 1262 aaKnown RBP9.43□□□□□ -0.9
MSH6-211ENST00000606499 PHKA1P46020 1223 aa9.43□□□□□ -0.9
MSH6-211ENST00000606499 BCAMP50895 628 aa9.43□□□□□ -0.9
MSH6-211ENST00000606499 KIAA2012Q0VF49 1180 aa9.43□□□□□ -0.9
MSH6-211ENST00000606499 DOK7Q18PE1 504 aa9.43□□□□□ -0.9
MSH6-211ENST00000606499 GORABQ5T7V8 394 aa9.43□□□□□ -0.9
MSH6-211ENST00000606499 CCDC102BQ68D86 513 aa9.43□□□□□ -0.9
MSH6-211ENST00000606499 C15orf52Q6ZUT6 534 aaKnown RBP9.43□□□□□ -0.9
MSH6-211ENST00000606499 FAM84BQ96KN1 310 aaPredicted RBP9.43□□□□□ -0.9
MSH6-211ENST00000606499 ZC3H12CQ9C0D7 883 aaKnown RBP9.43□□□□□ -0.9
MSH6-211ENST00000606499 DBNDD1Q9H9R9 158 aa9.43□□□□□ -0.9
MSH6-211ENST00000606499 IQSEC3Q9UPP2 1182 aaPredicted RBP9.43□□□□□ -0.9
MSH6-211ENST00000606499 AK9Q5TCS8 1911 aa9.43□□□□□ -0.9
MSH6-211ENST00000606499 ADAMTSL1Q8N6G6 1762 aa9.42□□□□□ -0.9
MSH6-211ENST00000606499 MX1P20591 662 aa9.42□□□□□ -0.9
MSH6-211ENST00000606499 HIBADHP31937 336 aaKnown RBP9.42□□□□□ -0.9
MSH6-211ENST00000606499 SCARF1Q14162 830 aa9.42□□□□□ -0.9
MSH6-211ENST00000606499 CAVIN4Q5BKX8 364 aa9.42□□□□□ -0.9
MSH6-211ENST00000606499 ZNF804AQ7Z570 1209 aa9.42□□□□□ -0.9
MSH6-211ENST00000606499 LARGE2Q8N3Y3 721 aa9.42□□□□□ -0.9
MSH6-211ENST00000606499 G3V3G9 751 aa9.41□□□□□ -0.9
MSH6-211ENST00000606499 ECE2O60344 883 aa9.41□□□□□ -0.9
MSH6-211ENST00000606499 GRIN3BO60391 1043 aa9.41□□□□□ -0.9
MSH6-211ENST00000606499 LMNB1P20700 586 aa9.41□□□□□ -0.9
MSH6-211ENST00000606499 RASGRF1Q13972 1273 aa9.41□□□□□ -0.9
MSH6-211ENST00000606499 TTC39AQ5SRH9 613 aa9.41□□□□□ -0.9
MSH6-211ENST00000606499 DCAF8Q5TAQ9 597 aa9.41□□□□□ -0.9
MSH6-211ENST00000606499 PI16Q6UXB8 463 aa9.41□□□□□ -0.9
MSH6-211ENST00000606499 FBXO33Q7Z6M2 555 aa9.41□□□□□ -0.9
MSH6-211ENST00000606499 VPS37DQ86XT2 251 aa9.41□□□□□ -0.9
MSH6-211ENST00000606499 NDUFB9Q9Y6M9 179 aa9.41□□□□□ -0.9
MSH6-211ENST00000606499 MYH7P12883 1935 aa9.41□□□□□ -0.9
MSH6-211ENST00000606499 YDJCA8MPS7 323 aa9.4□□□□□ -0.9
MSH6-211ENST00000606499 IL1R1P14778 569 aa9.4□□□□□ -0.9
MSH6-211ENST00000606499 ARID4AP29374 1257 aaPredicted RBP9.4□□□□□ -0.9
MSH6-211ENST00000606499 MCAMP43121 646 aa9.4□□□□□ -0.9
MSH6-211ENST00000606499 PDE1AP54750 535 aa9.4□□□□□ -0.9
MSH6-211ENST00000606499 CCDC158Q5M9N0 1113 aa9.4□□□□□ -0.9
MSH6-211ENST00000606499 PLEKHM2Q8IWE5 1019 aa9.4□□□□□ -0.9
MSH6-211ENST00000606499 NIM1KQ8IY84 436 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms