RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 ANKRD2Q9GZV1 360 aa15.51■□□□□ 0.07
CTSA-210ENST00000606000 ZNF609O15014 1411 aa15.51■□□□□ 0.07
CTSA-210ENST00000606000 ASTN2O75129 1339 aaPredicted RBP15.5■□□□□ 0.07
CTSA-210ENST00000606000 TMEM88BA6NKF7 163 aa15.5■□□□□ 0.07
CTSA-210ENST00000606000 H7C1D1 291 aa15.5■□□□□ 0.07
CTSA-210ENST00000606000 PLIN1O60240 522 aa15.5■□□□□ 0.07
CTSA-210ENST00000606000 RPS12P25398 132 aaKnown RBP15.5■□□□□ 0.07
CTSA-210ENST00000606000 KCNJ4P48050 445 aa15.5■□□□□ 0.07
CTSA-210ENST00000606000 RABL6Q3YEC7 729 aaPredicted RBP15.5■□□□□ 0.07
CTSA-210ENST00000606000 RSBN1LQ6PCB5 846 aaPredicted RBP15.5■□□□□ 0.07
CTSA-210ENST00000606000 LDHAL6AQ6ZMR3 332 aa15.5■□□□□ 0.07
CTSA-210ENST00000606000 JMYQ8N9B5 988 aa15.5■□□□□ 0.07
CTSA-210ENST00000606000 TNNQ9UQP3 1299 aa15.5■□□□□ 0.07
CTSA-210ENST00000606000 USP17L3A6NCW0 530 aa15.49■□□□□ 0.07
CTSA-210ENST00000606000 USP17L4A6NCW7 530 aa15.49■□□□□ 0.07
CTSA-210ENST00000606000 KIF4BQ2VIQ3 1234 aa15.49■□□□□ 0.07
CTSA-210ENST00000606000 USP17L1Q7RTZ2 530 aa15.49■□□□□ 0.07
CTSA-210ENST00000606000 PODNQ7Z5L7 613 aa15.49■□□□□ 0.07
CTSA-210ENST00000606000 KLHDC4Q8TBB5 520 aa15.49■□□□□ 0.07
CTSA-210ENST00000606000 CNNM1Q9NRU3 951 aa15.49■□□□□ 0.07
CTSA-210ENST00000606000 CNTNAP1P78357 1384 aa15.49■□□□□ 0.07
CTSA-210ENST00000606000 BCAR3O75815 825 aa15.48■□□□□ 0.07
CTSA-210ENST00000606000 BRPF1P55201 1214 aaPredicted RBP15.48■□□□□ 0.07
CTSA-210ENST00000606000 DACT2Q5SW24 774 aa15.48■□□□□ 0.07
CTSA-210ENST00000606000 CST9Q5W186 159 aa15.48■□□□□ 0.07
CTSA-210ENST00000606000 GMLQ99445 158 aa15.48■□□□□ 0.07
CTSA-210ENST00000606000 COA1Q9GZY4 146 aa15.48■□□□□ 0.07
CTSA-210ENST00000606000 PGAP2Q9UHJ9 254 aa15.48■□□□□ 0.07
CTSA-210ENST00000606000 MAPK8IP2Q13387 824 aaPredicted RBP15.47■□□□□ 0.07
CTSA-210ENST00000606000 LRRC24Q50LG9 513 aa15.47■□□□□ 0.07
CTSA-210ENST00000606000 POLR2AP24928 1970 aaKnown RBP15.46■□□□□ 0.07
CTSA-210ENST00000606000 ADM5C9JUS6 153 aa15.46■□□□□ 0.07
CTSA-210ENST00000606000 ZNF280AP59817 542 aaPredicted RBP15.46■□□□□ 0.07
CTSA-210ENST00000606000 USP48Q86UV5 1035 aa15.46■□□□□ 0.07
CTSA-210ENST00000606000 AGBL3Q8NEM8 1001 aa15.46■□□□□ 0.07
CTSA-210ENST00000606000 ZC3H15Q8WU90 426 aaKnown RBP15.46■□□□□ 0.07
CTSA-210ENST00000606000 API5Q9BZZ5 524 aaKnown RBP15.46■□□□□ 0.07
CTSA-210ENST00000606000 ZNF408Q9H9D4 720 aa15.46■□□□□ 0.07
CTSA-210ENST00000606000 CD209Q9NNX6 404 aa15.46■□□□□ 0.07
CTSA-210ENST00000606000 GGA3Q9NZ52 723 aa15.46■□□□□ 0.07
CTSA-210ENST00000606000 ABT1Q9ULW3 272 aaKnown RBP15.46■□□□□ 0.07
CTSA-210ENST00000606000 KIF16BQ96L93 1317 aa15.45■□□□□ 0.06
CTSA-210ENST00000606000 GTF2IP78347 998 aa15.45■□□□□ 0.06
CTSA-210ENST00000606000 MEIS3Q99687 375 aa15.45■□□□□ 0.06
CTSA-210ENST00000606000 SCAF8Q9UPN6 1271 aaKnown RBP15.45■□□□□ 0.06
CTSA-210ENST00000606000 JAG2Q9Y219 1238 aa15.45■□□□□ 0.06
CTSA-210ENST00000606000 RIPOR2Q9Y4F9 1068 aa15.45■□□□□ 0.06
CTSA-210ENST00000606000 ARAP2Q8WZ64 1704 aa15.45■□□□□ 0.06
CTSA-210ENST00000606000 THSD7BQ9C0I4 1608 aa15.44■□□□□ 0.06
CTSA-210ENST00000606000 CELF2O95319 508 aaKnown RBP15.44■□□□□ 0.06
CTSA-210ENST00000606000 USP17L8P0C7I0 530 aa15.44■□□□□ 0.06
CTSA-210ENST00000606000 RFX5P48382 616 aaPredicted RBP15.44■□□□□ 0.06
CTSA-210ENST00000606000 VEGFBP49765 207 aa15.44■□□□□ 0.06
CTSA-210ENST00000606000 STRIP1Q5VSL9 837 aa15.44■□□□□ 0.06
CTSA-210ENST00000606000 C15orf52Q6ZUT6 534 aaKnown RBP15.44■□□□□ 0.06
CTSA-210ENST00000606000 CDC37L1Q7L3B6 337 aa15.44■□□□□ 0.06
CTSA-210ENST00000606000 FRAT1Q92837 279 aaPredicted RBP15.44■□□□□ 0.06
CTSA-210ENST00000606000 MYOZ2Q9NPC6 264 aa15.44■□□□□ 0.06
CTSA-210ENST00000606000 RASSF10A6NK89 507 aa15.43■□□□□ 0.06
CTSA-210ENST00000606000 UBTFL1P0CB47 393 aaPredicted RBP15.43■□□□□ 0.06
CTSA-210ENST00000606000 HSPA1AP0DMV8 641 aaKnown RBP15.43■□□□□ 0.06
CTSA-210ENST00000606000 HSPA1BP0DMV9 641 aaKnown RBP15.43■□□□□ 0.06
CTSA-210ENST00000606000 TRIM27P14373 513 aa15.43■□□□□ 0.06
CTSA-210ENST00000606000 GYG1P46976 350 aa15.43■□□□□ 0.06
CTSA-210ENST00000606000 ANGEL2Q5VTE6 544 aaKnown RBP15.43■□□□□ 0.06
CTSA-210ENST00000606000 TTLL5Q6EMB2 1281 aa15.43■□□□□ 0.06
CTSA-210ENST00000606000 KRT26Q7Z3Y9 468 aa15.43■□□□□ 0.06
CTSA-210ENST00000606000 KIAA0825Q8IV33 1275 aa15.43■□□□□ 0.06
CTSA-210ENST00000606000 CERS5Q8N5B7 392 aa15.43■□□□□ 0.06
CTSA-210ENST00000606000 LRRFIP2Q9Y608 721 aaKnown RBP15.43■□□□□ 0.06
CTSA-210ENST00000606000 ZBED9Q6R2W3 1325 aa15.43■□□□□ 0.06
CTSA-210ENST00000606000 SASH1O94885 1247 aa15.42■□□□□ 0.06
CTSA-210ENST00000606000 SCARF1Q14162 830 aa15.42■□□□□ 0.06
CTSA-210ENST00000606000 DEFB115Q30KQ5 88 aa15.42■□□□□ 0.06
CTSA-210ENST00000606000 METTL24Q5JXM2 366 aa15.42■□□□□ 0.06
CTSA-210ENST00000606000 ZNF804AQ7Z570 1209 aa15.42■□□□□ 0.06
CTSA-210ENST00000606000 VGLL2Q8N8G2 317 aa15.42■□□□□ 0.06
CTSA-210ENST00000606000 CLUAP1Q96AJ1 413 aa15.42■□□□□ 0.06
CTSA-210ENST00000606000 MROH5Q6ZUA9 1318 aa15.42■□□□□ 0.06
CTSA-210ENST00000606000 IL1R1P14778 569 aa15.41■□□□□ 0.06
CTSA-210ENST00000606000 GRM1Q13255 1194 aa15.41■□□□□ 0.06
CTSA-210ENST00000606000 NBPF9Q3BBW0 867 aa15.41■□□□□ 0.06
CTSA-210ENST00000606000 INTS3Q68E01 1043 aaKnown RBP15.41■□□□□ 0.06
CTSA-210ENST00000606000 CYP4F22Q6NT55 531 aa15.41■□□□□ 0.06
CTSA-210ENST00000606000 PAXIP1Q6ZW49 1069 aaPredicted RBP15.41■□□□□ 0.06
CTSA-210ENST00000606000 ARHGAP45Q92619 1136 aa15.41■□□□□ 0.06
CTSA-210ENST00000606000 DCPSQ96C86 337 aaKnown RBP15.41■□□□□ 0.06
CTSA-210ENST00000606000 PCDHAC2Q9Y5I4 1007 aa15.41■□□□□ 0.06
CTSA-210ENST00000606000 TLL2Q9Y6L7 1015 aa15.41■□□□□ 0.06
CTSA-210ENST00000606000 MYO3BQ8WXR4 1341 aa15.41■□□□□ 0.06
CTSA-210ENST00000606000 PTPN12Q05209 780 aaKnown RBP15.4■□□□□ 0.06
CTSA-210ENST00000606000 UBE4AQ14139 1066 aa15.4■□□□□ 0.06
CTSA-210ENST00000606000 ATF7IPQ6VMQ6 1270 aa15.4■□□□□ 0.06
CTSA-210ENST00000606000 FAM84BQ96KN1 310 aaPredicted RBP15.4■□□□□ 0.06
CTSA-210ENST00000606000 SIL1Q9H173 461 aa15.4■□□□□ 0.06
CTSA-210ENST00000606000 ECM29Q5VYK3 1845 aa15.4■□□□□ 0.06
CTSA-210ENST00000606000 F8W031 263 aaPredicted RBP15.39■□□□□ 0.05
CTSA-210ENST00000606000 SAPCD2Q86UD0 394 aa15.39■□□□□ 0.05
CTSA-210ENST00000606000 IQSEC3Q9UPP2 1182 aaPredicted RBP15.39■□□□□ 0.05
CTSA-210ENST00000606000 PA2G4Q9UQ80 394 aaKnown RBP15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms