RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 SGSM2O43147 1006 aa21.76■■□□□ 1.07
VRK3-225ENST00000601912 MASTLQ96GX5 879 aa21.76■■□□□ 1.07
VRK3-225ENST00000601912 SNRKQ9NRH2 765 aa21.76■■□□□ 1.07
VRK3-225ENST00000601912 GNL3LQ9NVN8 582 aaKnown RBP21.76■■□□□ 1.07
VRK3-225ENST00000601912 MCAMP43121 646 aa21.75■■□□□ 1.07
VRK3-225ENST00000601912 RBM25P49756 843 aaKnown RBP21.75■■□□□ 1.07
VRK3-225ENST00000601912 SCARF1Q14162 830 aa21.75■■□□□ 1.07
VRK3-225ENST00000601912 TTF1Q15361 905 aaPredicted RBP21.75■■□□□ 1.07
VRK3-225ENST00000601912 VPS37DQ86XT2 251 aa21.75■■□□□ 1.07
VRK3-225ENST00000601912 USP26Q9BXU7 913 aa21.75■■□□□ 1.07
VRK3-225ENST00000601912 LEMD3Q9Y2U8 911 aa21.75■■□□□ 1.07
VRK3-225ENST00000601912 ZNF804BA4D1E1 1349 aa21.75■■□□□ 1.07
VRK3-225ENST00000601912 XDHP47989 1333 aa21.75■■□□□ 1.07
VRK3-225ENST00000601912 A0A1B0GUL6 1792 aa21.75■■□□□ 1.07
VRK3-225ENST00000601912 H0YIN7 160 aa21.75■■□□□ 1.07
VRK3-225ENST00000601912 ZAP70P43403 619 aa21.75■■□□□ 1.07
VRK3-225ENST00000601912 BCAMP50895 628 aa21.75■■□□□ 1.07
VRK3-225ENST00000601912 KIAA1211Q6ZU35 1233 aa21.75■■□□□ 1.07
VRK3-225ENST00000601912 ANO2Q9NQ90 1003 aa21.75■■□□□ 1.07
VRK3-225ENST00000601912 EPB41L2O43491 1005 aaKnown RBP21.74■■□□□ 1.07
VRK3-225ENST00000601912 C2CD5Q86YS7 1000 aa21.74■■□□□ 1.07
VRK3-225ENST00000601912 RAD50Q92878 1312 aa21.74■■□□□ 1.07
VRK3-225ENST00000601912 PPEF1O14829 653 aaPredicted RBP21.73■■□□□ 1.07
VRK3-225ENST00000601912 NMIQ13287 307 aaPredicted RBP21.73■■□□□ 1.07
VRK3-225ENST00000601912 SPATA5Q8NB90 893 aa21.73■■□□□ 1.07
VRK3-225ENST00000601912 SP8Q8IXZ3 490 aa21.72■■□□□ 1.07
VRK3-225ENST00000601912 DDRGK1Q96HY6 314 aa21.72■■□□□ 1.07
VRK3-225ENST00000601912 TMX4Q9H1E5 349 aaPredicted RBP21.72■■□□□ 1.07
VRK3-225ENST00000601912 ANTXR1Q9H6X2 564 aa21.72■■□□□ 1.07
VRK3-225ENST00000601912 GYG1P46976 350 aa21.72■■□□□ 1.07
VRK3-225ENST00000601912 PI16Q6UXB8 463 aa21.72■■□□□ 1.07
VRK3-225ENST00000601912 ZNF622Q969S3 477 aaKnown RBP eCLIP21.72■■□□□ 1.07
VRK3-225ENST00000601912 FAM227BQ96M60 508 aa21.72■■□□□ 1.07
VRK3-225ENST00000601912 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.72■■□□□ 1.072e-7■■■□□ 18.9
VRK3-225ENST00000601912 HMG20BQ9P0W2 317 aa21.72■■□□□ 1.07
VRK3-225ENST00000601912 NSFL1CQ9UNZ2 370 aaKnown RBP21.72■■□□□ 1.07
VRK3-225ENST00000601912 ZFYP08048 801 aaPredicted RBP21.71■■□□□ 1.07
VRK3-225ENST00000601912 MCCP23508 829 aa21.71■■□□□ 1.07
VRK3-225ENST00000601912 ATP2B4P23634 1241 aa21.71■■□□□ 1.07
VRK3-225ENST00000601912 RASGRF1Q13972 1273 aa21.71■■□□□ 1.07
VRK3-225ENST00000601912 STYK1Q6J9G0 422 aa21.71■■□□□ 1.07
VRK3-225ENST00000601912 FAM84BQ96KN1 310 aaPredicted RBP21.71■■□□□ 1.07
VRK3-225ENST00000601912 ATP6V0A2Q9Y487 856 aa21.71■■□□□ 1.07
VRK3-225ENST00000601912 WTIPA6NIX2 430 aaPredicted RBP21.7■■□□□ 1.06
VRK3-225ENST00000601912 HIBADHP31937 336 aaKnown RBP21.7■■□□□ 1.06
VRK3-225ENST00000601912 GPSM2P81274 684 aa21.7■■□□□ 1.06
VRK3-225ENST00000601912 FBXO33Q7Z6M2 555 aa21.7■■□□□ 1.06
VRK3-225ENST00000601912 IL25Q9H293 177 aa21.7■■□□□ 1.06
VRK3-225ENST00000601912 GGA1Q9UJY5 639 aa21.7■■□□□ 1.06
VRK3-225ENST00000601912 AKAP11Q9UKA4 1901 aa21.7■■□□□ 1.06
VRK3-225ENST00000601912 A0A0D9SFI3 127 aa21.69■■□□□ 1.06
VRK3-225ENST00000601912 RNF113AO15541 343 aaKnown RBP21.69■■□□□ 1.06
VRK3-225ENST00000601912 CYP2E1P05181 493 aaPredicted RBP21.69■■□□□ 1.06
VRK3-225ENST00000601912 ZSCAN25Q6NSZ9 544 aa21.69■■□□□ 1.06
VRK3-225ENST00000601912 PODXL2Q9NZ53 605 aa21.69■■□□□ 1.06
VRK3-225ENST00000601912 SEMA3EO15041 775 aa21.69■■□□□ 1.06
VRK3-225ENST00000601912 HELLSQ9NRZ9 838 aa21.69■■□□□ 1.06
VRK3-225ENST00000601912 MCMDC2Q4G0Z9 681 aa21.68■■□□□ 1.06
VRK3-225ENST00000601912 CNKSR1Q969H4 720 aa21.68■■□□□ 1.06
VRK3-225ENST00000601912 MTFR1LQ9H019 292 aa21.68■■□□□ 1.06
VRK3-225ENST00000601912 DENND2AQ9ULE3 1009 aa21.68■■□□□ 1.06
VRK3-225ENST00000601912 FRAT2O75474 233 aaPredicted RBP21.67■■□□□ 1.06
VRK3-225ENST00000601912 UFL1O94874 794 aa21.67■■□□□ 1.06
VRK3-225ENST00000601912 POLD1P28340 1107 aa21.67■■□□□ 1.06
VRK3-225ENST00000601912 R3HDM1Q15032 1099 aaKnown RBP21.67■■□□□ 1.06
VRK3-225ENST00000601912 C15orf52Q6ZUT6 534 aaKnown RBP21.67■■□□□ 1.06
VRK3-225ENST00000601912 IPO9Q96P70 1041 aaKnown RBP21.67■■□□□ 1.06
VRK3-225ENST00000601912 COL11A2P13942 1736 aaPredicted RBP21.67■■□□□ 1.06
VRK3-225ENST00000601912 ZBTB7AO95365 584 aa21.66■■□□□ 1.06
VRK3-225ENST00000601912 KLRK1P26718 216 aa21.66■■□□□ 1.06
VRK3-225ENST00000601912 LSG1Q9H089 658 aaKnown RBP21.66■■□□□ 1.06
VRK3-225ENST00000601912 C10orf71Q711Q0 1435 aa21.66■■□□□ 1.06
VRK3-225ENST00000601912 IDH1O75874 414 aaKnown RBP21.66■■□□□ 1.06
VRK3-225ENST00000601912 WASHC4Q2M389 1173 aa21.66■■□□□ 1.06
VRK3-225ENST00000601912 ZMYM1Q5SVZ6 1142 aa21.66■■□□□ 1.06
VRK3-225ENST00000601912 PIH1D3Q9NQM4 214 aaKnown RBP21.66■■□□□ 1.06
VRK3-225ENST00000601912 IQSEC3Q9UPP2 1182 aaPredicted RBP21.66■■□□□ 1.06
VRK3-225ENST00000601912 ZBTB22O15209 634 aa21.65■■□□□ 1.06
VRK3-225ENST00000601912 CHRNA5P30532 468 aa21.65■■□□□ 1.06
VRK3-225ENST00000601912 MAP3K12Q12852 859 aa21.65■■□□□ 1.06
VRK3-225ENST00000601912 ZNF804AQ7Z570 1209 aa21.65■■□□□ 1.06
VRK3-225ENST00000601912 MED23Q9ULK4 1368 aa21.65■■□□□ 1.06
VRK3-225ENST00000601912 IRS2Q9Y4H2 1338 aa21.64■■□□□ 1.06
VRK3-225ENST00000601912 SLC51AQ86UW1 340 aa21.64■■□□□ 1.05
VRK3-225ENST00000601912 MPNDQ8N594 471 aa21.64■■□□□ 1.05
VRK3-225ENST00000601912 TBC1D16Q8TBP0 767 aa21.64■■□□□ 1.05
VRK3-225ENST00000601912 LRRC37AA6NMS7 1700 aa21.64■■□□□ 1.05
VRK3-225ENST00000601912 PDS5AQ29RF7 1337 aaKnown RBP21.64■■□□□ 1.05
VRK3-225ENST00000601912 CCDC171Q6TFL3 1326 aa21.64■■□□□ 1.05
VRK3-225ENST00000601912 C6orf229H3BNL8 230 aa21.63■■□□□ 1.05
VRK3-225ENST00000601912 SLC9C2Q5TAH2 1124 aa21.63■■□□□ 1.05
VRK3-225ENST00000601912 PRPF40BQ6NWY9 871 aaKnown RBP21.63■■□□□ 1.05
VRK3-225ENST00000601912 TXNRD3Q86VQ6 643 aa21.63■■□□□ 1.05
VRK3-225ENST00000601912 ATF5Q9Y2D1 282 aaPredicted RBP21.63■■□□□ 1.05
VRK3-225ENST00000601912 UBE3CQ15386 1083 aa21.63■■□□□ 1.05
VRK3-225ENST00000601912 ZNF589Q86UQ0 364 aaPredicted RBP21.63■■□□□ 1.05
VRK3-225ENST00000601912 APPBP2Q92624 585 aa21.63■■□□□ 1.05
VRK3-225ENST00000601912 LRP2BPQ9P2M1 347 aa21.63■■□□□ 1.05
VRK3-225ENST00000601912 POLLQ9UGP5 575 aa21.63■■□□□ 1.05
VRK3-225ENST00000601912 CHGBP05060 677 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms