RNA–Protein interactions for RNA: ENST00000599846.5

ARHGEF1-219, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ARHGEF1, Length 3,393 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-219ENST00000599846 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.51■□□□□ 0.557e-6■■□□□ 11.8
ARHGEF1-219ENST00000599846 V9GYY5 206 aaPredicted RBP18.51■□□□□ 0.55
ARHGEF1-219ENST00000599846 NCAPD2Q15021 1401 aa18.51■□□□□ 0.55
ARHGEF1-219ENST00000599846 IL15P40933 162 aaPredicted RBP18.5■□□□□ 0.55
ARHGEF1-219ENST00000599846 ZNF710Q8N1W2 664 aa18.5■□□□□ 0.55
ARHGEF1-219ENST00000599846 KLF18A0A0U1RQI7 1052 aa18.5■□□□□ 0.55
ARHGEF1-219ENST00000599846 RNF113AO15541 343 aaKnown RBP18.5■□□□□ 0.55
ARHGEF1-219ENST00000599846 IGSF3O75054 1194 aa18.5■□□□□ 0.55
ARHGEF1-219ENST00000599846 CCDC144BQ3MJ40 725 aa18.5■□□□□ 0.55
ARHGEF1-219ENST00000599846 TSGA10IPQ3SY00 556 aa18.5■□□□□ 0.55
ARHGEF1-219ENST00000599846 CCDC144CPQ8IYA2 1237 aa18.5■□□□□ 0.55
ARHGEF1-219ENST00000599846 SKILP12757 684 aa18.5■□□□□ 0.55
ARHGEF1-219ENST00000599846 RXRAP19793 462 aa18.5■□□□□ 0.55
ARHGEF1-219ENST00000599846 IMMTQ16891 758 aaKnown RBP18.5■□□□□ 0.55
ARHGEF1-219ENST00000599846 C19orf44Q9H6X5 657 aa18.5■□□□□ 0.55
ARHGEF1-219ENST00000599846 PRDM11Q9NQV5 511 aa18.5■□□□□ 0.55
ARHGEF1-219ENST00000599846 ANO10Q9NW15 660 aa18.5■□□□□ 0.55
ARHGEF1-219ENST00000599846 ORC3Q9UBD5 711 aaPredicted RBP18.5■□□□□ 0.55
ARHGEF1-219ENST00000599846 LTN1O94822 1766 aa18.49■□□□□ 0.55
ARHGEF1-219ENST00000599846 U2AF2P26368 475 aaKnown RBP eCLIP18.49■□□□□ 0.555e-6■■■□□ 17.8
ARHGEF1-219ENST00000599846 GOLPH3LQ9H4A5 285 aa18.49■□□□□ 0.55
ARHGEF1-219ENST00000599846 ZHX1Q9UKY1 873 aaPredicted RBP18.49■□□□□ 0.55
ARHGEF1-219ENST00000599846 ADGRL3Q9HAR2 1447 aa18.49■□□□□ 0.55
ARHGEF1-219ENST00000599846 EYA2O00167 538 aa18.49■□□□□ 0.55
ARHGEF1-219ENST00000599846 PDIA3P30101 505 aaKnown RBP18.49■□□□□ 0.55
ARHGEF1-219ENST00000599846 FAM89AQ96GI7 184 aa18.49■□□□□ 0.55
ARHGEF1-219ENST00000599846 TOMM22Q9NS69 142 aa18.49■□□□□ 0.55
ARHGEF1-219ENST00000599846 GPTP24298 496 aa18.48■□□□□ 0.55
ARHGEF1-219ENST00000599846 TRDNQ13061 729 aa18.48■□□□□ 0.55
ARHGEF1-219ENST00000599846 TDRD7Q8NHU6 1098 aaKnown RBP18.48■□□□□ 0.55
ARHGEF1-219ENST00000599846 SYTL4Q96C24 671 aaPredicted RBP18.48■□□□□ 0.55
ARHGEF1-219ENST00000599846 NAT10Q9H0A0 1025 aaKnown RBP18.48■□□□□ 0.55
ARHGEF1-219ENST00000599846 HEG1Q9ULI3 1381 aa18.48■□□□□ 0.55
ARHGEF1-219ENST00000599846 NAA30Q147X3 362 aaPredicted RBP18.48■□□□□ 0.55
ARHGEF1-219ENST00000599846 PI16Q6UXB8 463 aa18.48■□□□□ 0.55
ARHGEF1-219ENST00000599846 HELLSQ9NRZ9 838 aa18.48■□□□□ 0.55
ARHGEF1-219ENST00000599846 MAST3O60307 1309 aa18.48■□□□□ 0.55
ARHGEF1-219ENST00000599846 MARCKSP29966 332 aaPredicted RBP18.48■□□□□ 0.55
ARHGEF1-219ENST00000599846 NBPF26B4DH59 902 aa18.47■□□□□ 0.55
ARHGEF1-219ENST00000599846 CTAGE5O15320 804 aa18.47■□□□□ 0.55
ARHGEF1-219ENST00000599846 CTDNEP1O95476 244 aa18.47■□□□□ 0.55
ARHGEF1-219ENST00000599846 ADORA1P30542 326 aa18.47■□□□□ 0.55
ARHGEF1-219ENST00000599846 NBPF14Q5TI25 921 aa18.47■□□□□ 0.55
ARHGEF1-219ENST00000599846 NBPF10Q6P3W6 841 aaKnown RBP18.47■□□□□ 0.55
ARHGEF1-219ENST00000599846 NBPF15Q8N660 670 aa18.47■□□□□ 0.55
ARHGEF1-219ENST00000599846 M0R2C6 588 aa18.47■□□□□ 0.55
ARHGEF1-219ENST00000599846 IDH1O75874 414 aaKnown RBP18.47■□□□□ 0.55
ARHGEF1-219ENST00000599846 OSBP2Q969R2 916 aa18.47■□□□□ 0.55
ARHGEF1-219ENST00000599846 LLPHQ9BRT6 129 aaKnown RBP18.47■□□□□ 0.55
ARHGEF1-219ENST00000599846 RGPD2P0DJD1 1756 aa18.47■□□□□ 0.55
ARHGEF1-219ENST00000599846 PRC1O43663 620 aa18.47■□□□□ 0.55
ARHGEF1-219ENST00000599846 FAM160A1Q05DH4 1040 aa18.47■□□□□ 0.55
ARHGEF1-219ENST00000599846 PTPN14Q15678 1187 aa18.47■□□□□ 0.55
ARHGEF1-219ENST00000599846 MRPS27Q92552 414 aaKnown RBP18.47■□□□□ 0.55
ARHGEF1-219ENST00000599846 KAT6BQ8WYB5 2073 aa18.46■□□□□ 0.55
ARHGEF1-219ENST00000599846 CCDC69A6NI79 296 aa18.46■□□□□ 0.55
ARHGEF1-219ENST00000599846 LRRFIP1Q32MZ4 808 aaKnown RBP18.46■□□□□ 0.55
ARHGEF1-219ENST00000599846 RABL6Q3YEC7 729 aaPredicted RBP18.46■□□□□ 0.55
ARHGEF1-219ENST00000599846 NAA16Q6N069 864 aaPredicted RBP18.46■□□□□ 0.55
ARHGEF1-219ENST00000599846 NFXL1Q6ZNB6 911 aa18.46■□□□□ 0.55
ARHGEF1-219ENST00000599846 ALDH8A1Q9H2A2 487 aaPredicted RBP18.46■□□□□ 0.55
ARHGEF1-219ENST00000599846 CEP135Q66GS9 1140 aa18.46■□□□□ 0.55
ARHGEF1-219ENST00000599846 ATG9AQ7Z3C6 839 aa18.46■□□□□ 0.55
ARHGEF1-219ENST00000599846 CTNNA3Q9UI47 895 aa18.46■□□□□ 0.55
ARHGEF1-219ENST00000599846 RCOR1Q9UKL0 485 aa18.46■□□□□ 0.55
ARHGEF1-219ENST00000599846 NFAT5O94916 1531 aa18.46■□□□□ 0.55
ARHGEF1-219ENST00000599846 ZNF213O14771 459 aa18.45■□□□□ 0.54
ARHGEF1-219ENST00000599846 FOXO4P98177 505 aa18.45■□□□□ 0.54
ARHGEF1-219ENST00000599846 ZMYM1Q5SVZ6 1142 aa18.45■□□□□ 0.54
ARHGEF1-219ENST00000599846 DSCC1Q9BVC3 393 aa18.45■□□□□ 0.54
ARHGEF1-219ENST00000599846 PCDHA7Q9UN72 937 aa18.45■□□□□ 0.54
ARHGEF1-219ENST00000599846 EVA1CP58658 441 aa18.45■□□□□ 0.54
ARHGEF1-219ENST00000599846 DHX16O60231 1041 aaKnown RBP18.45■□□□□ 0.54
ARHGEF1-219ENST00000599846 METTL24Q5JXM2 366 aa18.45■□□□□ 0.54
ARHGEF1-219ENST00000599846 PLA2G4DQ86XP0 818 aa18.45■□□□□ 0.54
ARHGEF1-219ENST00000599846 CLIC4Q9Y696 253 aa18.45■□□□□ 0.54
ARHGEF1-219ENST00000599846 KDM6AO15550 1401 aaPredicted RBP18.45■□□□□ 0.54
ARHGEF1-219ENST00000599846 XAGE2Q96GT9 111 aa18.44■□□□□ 0.54
ARHGEF1-219ENST00000599846 CNNM1Q9NRU3 951 aa18.44■□□□□ 0.54
ARHGEF1-219ENST00000599846 ZAP70P43403 619 aa18.44■□□□□ 0.54
ARHGEF1-219ENST00000599846 SMARCC2Q8TAQ2 1214 aa18.44■□□□□ 0.54
ARHGEF1-219ENST00000599846 ZCRB1Q8TBF4 217 aaKnown RBP18.44■□□□□ 0.54
ARHGEF1-219ENST00000599846 TUBGCP6Q96RT7 1819 aa18.44■□□□□ 0.54
ARHGEF1-219ENST00000599846 KIF13AQ9H1H9 1805 aa18.44■□□□□ 0.54
ARHGEF1-219ENST00000599846 FGAP02671 866 aa18.44■□□□□ 0.54
ARHGEF1-219ENST00000599846 ATP2B1P20020 1258 aa18.44■□□□□ 0.54
ARHGEF1-219ENST00000599846 NDUFA8P51970 172 aa18.44■□□□□ 0.54
ARHGEF1-219ENST00000599846 LRRC8AQ8IWT6 810 aa18.44■□□□□ 0.54
ARHGEF1-219ENST00000599846 CCDC82Q8N4S0 544 aa18.44■□□□□ 0.54
ARHGEF1-219ENST00000599846 CAVIN2O95810 425 aa18.43■□□□□ 0.54
ARHGEF1-219ENST00000599846 TPM4P67936 248 aa18.43■□□□□ 0.54
ARHGEF1-219ENST00000599846 IFIT5Q13325 482 aaKnown RBP18.43■□□□□ 0.54
ARHGEF1-219ENST00000599846 ATP2B3Q16720 1220 aa18.43■□□□□ 0.54
ARHGEF1-219ENST00000599846 TMC6Q7Z403 805 aa18.43■□□□□ 0.54
ARHGEF1-219ENST00000599846 USP27XA6NNY8 438 aa18.43■□□□□ 0.54
ARHGEF1-219ENST00000599846 H7C1W4 665 aa18.43■□□□□ 0.54
ARHGEF1-219ENST00000599846 SLC3A2P08195 630 aaKnown RBP18.43■□□□□ 0.54
ARHGEF1-219ENST00000599846 HSP90AA4PQ58FG1 418 aa18.43■□□□□ 0.54
ARHGEF1-219ENST00000599846 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.43■□□□□ 0.54
ARHGEF1-219ENST00000599846 MICU3Q86XE3 530 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms