RNA–Protein interactions for RNA: ENST00000598587.1

ARHGEF1-216, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARHGEF1, Length 359 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-216ENST00000598587 PDE8BO95263 885 aa14.98□□□□□ -0.01
ARHGEF1-216ENST00000598587 IL15P40933 162 aaPredicted RBP14.98□□□□□ -0.01
ARHGEF1-216ENST00000598587 LRRC24Q50LG9 513 aa14.98□□□□□ -0.01
ARHGEF1-216ENST00000598587 PNMA8AQ86V59 439 aaPredicted RBP14.98□□□□□ -0.01
ARHGEF1-216ENST00000598587 RBM46Q8TBY0 533 aaKnown RBP14.98□□□□□ -0.01
ARHGEF1-216ENST00000598587 SIL1Q9H173 461 aa14.98□□□□□ -0.01
ARHGEF1-216ENST00000598587 COPRSQ9NQ92 184 aa14.98□□□□□ -0.01
ARHGEF1-216ENST00000598587 ZNF609O15014 1411 aa14.98□□□□□ -0.01
ARHGEF1-216ENST00000598587 PSMD14O00487 310 aa14.97□□□□□ -0.01
ARHGEF1-216ENST00000598587 EPHX2P34913 555 aa14.97□□□□□ -0.01
ARHGEF1-216ENST00000598587 PUM3Q15397 648 aaKnown RBP14.97□□□□□ -0.01
ARHGEF1-216ENST00000598587 COG6Q9Y2V7 657 aa14.97□□□□□ -0.01
ARHGEF1-216ENST00000598587 MYO3BQ8WXR4 1341 aa14.96□□□□□ -0.01
ARHGEF1-216ENST00000598587 USP17L3A6NCW0 530 aa14.96□□□□□ -0.01
ARHGEF1-216ENST00000598587 USP17L4A6NCW7 530 aa14.96□□□□□ -0.01
ARHGEF1-216ENST00000598587 IFIT1P09914 478 aaKnown RBP14.96□□□□□ -0.01
ARHGEF1-216ENST00000598587 SLC5A1P13866 664 aa14.96□□□□□ -0.01
ARHGEF1-216ENST00000598587 GMPSP49915 693 aaPredicted RBP14.96□□□□□ -0.01
ARHGEF1-216ENST00000598587 SCNN1DP51172 638 aa14.96□□□□□ -0.01
ARHGEF1-216ENST00000598587 CAVIN4Q5BKX8 364 aa14.96□□□□□ -0.01
ARHGEF1-216ENST00000598587 USP17L1Q7RTZ2 530 aa14.96□□□□□ -0.01
ARHGEF1-216ENST00000598587 VPS37DQ86XT2 251 aa14.96□□□□□ -0.01
ARHGEF1-216ENST00000598587 SMC1BQ8NDV3 1235 aa14.96□□□□□ -0.01
ARHGEF1-216ENST00000598587 TAF1DQ9H5J8 278 aaPredicted RBP14.96□□□□□ -0.01
ARHGEF1-216ENST00000598587 GPRC5DQ9NZD1 345 aa14.96□□□□□ -0.01
ARHGEF1-216ENST00000598587 CEP126Q9P2H0 1117 aa14.96□□□□□ -0.01
ARHGEF1-216ENST00000598587 ECM29Q5VYK3 1845 aa14.96□□□□□ -0.01
ARHGEF1-216ENST00000598587 POTECB2RU33 542 aa14.95□□□□□ -0.02
ARHGEF1-216ENST00000598587 VIL1P09327 827 aaKnown RBP14.95□□□□□ -0.02
ARHGEF1-216ENST00000598587 RRP1P56182 461 aaKnown RBP14.95□□□□□ -0.02
ARHGEF1-216ENST00000598587 C1QTNF8P60827 252 aa14.95□□□□□ -0.02
ARHGEF1-216ENST00000598587 FSTL1Q12841 308 aa14.95□□□□□ -0.02
ARHGEF1-216ENST00000598587 EAPPQ56P03 285 aaPredicted RBP14.95□□□□□ -0.02
ARHGEF1-216ENST00000598587 VGLL2Q8N8G2 317 aa14.95□□□□□ -0.02
ARHGEF1-216ENST00000598587 DPF2Q92785 391 aa14.95□□□□□ -0.02
ARHGEF1-216ENST00000598587 FBXW7Q969H0 707 aa14.95□□□□□ -0.02
ARHGEF1-216ENST00000598587 ADARB2Q9NS39 739 aaKnown RBP14.95□□□□□ -0.02
ARHGEF1-216ENST00000598587 IRS2Q9Y4H2 1338 aa14.94□□□□□ -0.02
ARHGEF1-216ENST00000598587 WTIPA6NIX2 430 aaPredicted RBP14.94□□□□□ -0.02
ARHGEF1-216ENST00000598587 H7C1D1 291 aa14.94□□□□□ -0.02
ARHGEF1-216ENST00000598587 KLRK1P26718 216 aa14.94□□□□□ -0.02
ARHGEF1-216ENST00000598587 ATP8B2P98198 1209 aa14.94□□□□□ -0.02
ARHGEF1-216ENST00000598587 G3BP1Q13283 466 aaKnown RBP eCLIP14.94□□□□□ -0.02
ARHGEF1-216ENST00000598587 STRIP1Q5VSL9 837 aa14.94□□□□□ -0.02
ARHGEF1-216ENST00000598587 RSBN1LQ6PCB5 846 aaPredicted RBP14.94□□□□□ -0.02
ARHGEF1-216ENST00000598587 USP50Q70EL3 339 aaPredicted RBP14.94□□□□□ -0.02
ARHGEF1-216ENST00000598587 ATG9AQ7Z3C6 839 aa14.94□□□□□ -0.02
ARHGEF1-216ENST00000598587 TXNRD3Q86VQ6 643 aa14.94□□□□□ -0.02
ARHGEF1-216ENST00000598587 LDHDQ86WU2 507 aa14.94□□□□□ -0.02
ARHGEF1-216ENST00000598587 AGBL3Q8NEM8 1001 aa14.94□□□□□ -0.02
ARHGEF1-216ENST00000598587 LPIN2Q92539 896 aa14.94□□□□□ -0.02
ARHGEF1-216ENST00000598587 C1orf115Q9H7X2 142 aa14.94□□□□□ -0.02
ARHGEF1-216ENST00000598587 CD209Q9NNX6 404 aa14.94□□□□□ -0.02
ARHGEF1-216ENST00000598587 PA2G4Q9UQ80 394 aaKnown RBP14.94□□□□□ -0.02
ARHGEF1-216ENST00000598587 AKAP2Q9Y2D5 859 aa14.94□□□□□ -0.02
ARHGEF1-216ENST00000598587 PNMA6EA0A0J9YXQ4 647 aa14.93□□□□□ -0.02
ARHGEF1-216ENST00000598587 SNAP23O00161 211 aa14.93□□□□□ -0.02
ARHGEF1-216ENST00000598587 HMMRO75330 724 aa14.93□□□□□ -0.02
ARHGEF1-216ENST00000598587 IL1R1P14778 569 aa14.93□□□□□ -0.02
ARHGEF1-216ENST00000598587 HIBADHP31937 336 aaKnown RBP14.93□□□□□ -0.02
ARHGEF1-216ENST00000598587 MMP14P50281 582 aa14.93□□□□□ -0.02
ARHGEF1-216ENST00000598587 OS9Q13438 667 aaPredicted RBP14.93□□□□□ -0.02
ARHGEF1-216ENST00000598587 ATP2B3Q16720 1220 aa14.93□□□□□ -0.02
ARHGEF1-216ENST00000598587 SSH3Q8TE77 659 aa14.93□□□□□ -0.02
ARHGEF1-216ENST00000598587 CLEC11AQ9Y240 323 aa14.93□□□□□ -0.02
ARHGEF1-216ENST00000598587 TRPM7Q96QT4 1865 aa14.93□□□□□ -0.02
ARHGEF1-216ENST00000598587 FRAT2O75474 233 aaPredicted RBP14.92□□□□□ -0.02
ARHGEF1-216ENST00000598587 EPS15P42566 896 aa14.92□□□□□ -0.02
ARHGEF1-216ENST00000598587 POLA2Q14181 598 aa14.92□□□□□ -0.02
ARHGEF1-216ENST00000598587 TTLL5Q6EMB2 1281 aa14.92□□□□□ -0.02
ARHGEF1-216ENST00000598587 MICALL2Q8IY33 904 aa14.92□□□□□ -0.02
ARHGEF1-216ENST00000598587 KCNQ5Q9NR82 932 aa14.92□□□□□ -0.02
ARHGEF1-216ENST00000598587 CNOT7Q9UIV1 285 aaKnown RBP14.92□□□□□ -0.02
ARHGEF1-216ENST00000598587 ZBTB12Q9Y330 459 aaPredicted RBP14.92□□□□□ -0.02
ARHGEF1-216ENST00000598587 GYG1P46976 350 aa14.91□□□□□ -0.02
ARHGEF1-216ENST00000598587 GTF2IP78347 998 aa14.91□□□□□ -0.02
ARHGEF1-216ENST00000598587 C20orf194Q5TEA3 1177 aa14.91□□□□□ -0.02
ARHGEF1-216ENST00000598587 CHADLQ6NUI6 762 aa14.91□□□□□ -0.02
ARHGEF1-216ENST00000598587 CEP85Q6P2H3 762 aa14.91□□□□□ -0.02
ARHGEF1-216ENST00000598587 RPAP2Q8IXW5 612 aaPredicted RBP14.91□□□□□ -0.02
ARHGEF1-216ENST00000598587 OGFOD1Q8N543 542 aa14.91□□□□□ -0.02
ARHGEF1-216ENST00000598587 ZBTB40Q9NUA8 1239 aa14.91□□□□□ -0.02
ARHGEF1-216ENST00000598587 FGFR2P21802 821 aa14.9□□□□□ -0.02
ARHGEF1-216ENST00000598587 FKBP1AP62942 108 aaKnown RBP14.9□□□□□ -0.02
ARHGEF1-216ENST00000598587 HSP90AB4PQ58FF6 505 aa14.9□□□□□ -0.02
ARHGEF1-216ENST00000598587 DACT2Q5SW24 774 aa14.9□□□□□ -0.02
ARHGEF1-216ENST00000598587 FAM84BQ96KN1 310 aaPredicted RBP14.9□□□□□ -0.02
ARHGEF1-216ENST00000598587 GNL3LQ9NVN8 582 aaKnown RBP14.9□□□□□ -0.02
ARHGEF1-216ENST00000598587 HDAC9Q9UKV0 1011 aa14.9□□□□□ -0.02
ARHGEF1-216ENST00000598587 SURF6O75683 361 aaKnown RBP14.89□□□□□ -0.03
ARHGEF1-216ENST00000598587 SASH1O94885 1247 aa14.89□□□□□ -0.03
ARHGEF1-216ENST00000598587 USP17L8P0C7I0 530 aa14.89□□□□□ -0.03
ARHGEF1-216ENST00000598587 TFCP2Q12800 502 aa14.89□□□□□ -0.03
ARHGEF1-216ENST00000598587 ERC1Q8IUD2 1116 aa14.89□□□□□ -0.03
ARHGEF1-216ENST00000598587 TDRD7Q8NHU6 1098 aaKnown RBP14.89□□□□□ -0.03
ARHGEF1-216ENST00000598587 POLR2AP24928 1970 aaKnown RBP14.88□□□□□ -0.03
ARHGEF1-216ENST00000598587 FBXO33Q7Z6M2 555 aa14.88□□□□□ -0.03
ARHGEF1-216ENST00000598587 ZC3H15Q8WU90 426 aaKnown RBP14.88□□□□□ -0.03
ARHGEF1-216ENST00000598587 TBC1D22AQ8WUA7 517 aa14.88□□□□□ -0.03
ARHGEF1-216ENST00000598587 FAM205AQ6ZU69 1335 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms