RNA–Protein interactions for RNA: ENST00000592776.1

PTPN2-215, Transcript of protein tyrosine phosphatase, non-receptor type 2, human

TSL 5

Gene PTPN2, Length 772 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN2-215	ENST00000592776	ZNF804B	A4D1E1	1349 aa		27.92	■■■□□ 2.06
PTPN2-215	ENST00000592776	KRT26	Q7Z3Y9	468 aa		27.91	■■■□□ 2.06
PTPN2-215	ENST00000592776	SAPCD2	Q86UD0	394 aa		27.91	■■■□□ 2.06
PTPN2-215	ENST00000592776	AGBL3	Q8NEM8	1001 aa		27.91	■■■□□ 2.06
PTPN2-215	ENST00000592776	FBXW7	Q969H0	707 aa		27.91	■■■□□ 2.06
PTPN2-215	ENST00000592776	ZNF594	Q96JF6	807 aa	Predicted RBP	27.91	■■■□□ 2.06
PTPN2-215	ENST00000592776	TAF5L	O75529	589 aa		27.9	■■■□□ 2.06
PTPN2-215	ENST00000592776	ZNF280A	P59817	542 aa	Predicted RBP	27.9	■■■□□ 2.06
PTPN2-215	ENST00000592776	SLFN5	Q08AF3	891 aa		27.9	■■■□□ 2.06
PTPN2-215	ENST00000592776	TNS4	Q8IZW8	715 aa		27.9	■■■□□ 2.06
PTPN2-215	ENST00000592776	SRCIN1	Q9C0H9	1055 aa		27.9	■■■□□ 2.06
PTPN2-215	ENST00000592776	ANKRD2	Q9GZV1	360 aa		27.9	■■■□□ 2.06
PTPN2-215	ENST00000592776	C9orf78	Q9NZ63	289 aa	Predicted RBP	27.9	■■■□□ 2.06
PTPN2-215	ENST00000592776	PSME4	Q14997	1843 aa		27.9	■■■□□ 2.06
PTPN2-215	ENST00000592776	POLR2A	P24928	1970 aa	Known RBP	27.9	■■■□□ 2.06
PTPN2-215	ENST00000592776		E9PSI1	815 aa		27.89	■■■□□ 2.06
PTPN2-215	ENST00000592776	AOC2	O75106	756 aa		27.89	■■■□□ 2.06
PTPN2-215	ENST00000592776	ALDH1L1	O75891	902 aa		27.89	■■■□□ 2.06
PTPN2-215	ENST00000592776	IFIT5	Q13325	482 aa	Known RBP	27.89	■■■□□ 2.06
PTPN2-215	ENST00000592776	DCPS	Q96C86	337 aa	Known RBP	27.89	■■■□□ 2.06
PTPN2-215	ENST00000592776	SCARF1	Q14162	830 aa		27.88	■■■□□ 2.05
PTPN2-215	ENST00000592776	DACT2	Q5SW24	774 aa		27.88	■■■□□ 2.05
PTPN2-215	ENST00000592776	AIDA	Q96BJ3	306 aa		27.88	■■■□□ 2.05
PTPN2-215	ENST00000592776	COA1	Q9GZY4	146 aa		27.88	■■■□□ 2.05
PTPN2-215	ENST00000592776	GGA3	Q9NZ52	723 aa		27.88	■■■□□ 2.05
PTPN2-215	ENST00000592776	USP17L8	P0C7I0	530 aa		27.87	■■■□□ 2.05
PTPN2-215	ENST00000592776	ECE1	P42892	770 aa		27.87	■■■□□ 2.05
PTPN2-215	ENST00000592776	SSH1	Q8WYL5	1049 aa		27.87	■■■□□ 2.05
PTPN2-215	ENST00000592776	SUCLG2	Q96I99	432 aa		27.87	■■■□□ 2.05
PTPN2-215	ENST00000592776	ZNF609	O15014	1411 aa		27.86	■■■□□ 2.05
PTPN2-215	ENST00000592776	KCNJ4	P48050	445 aa		27.86	■■■□□ 2.05
PTPN2-215	ENST00000592776	KAZALD1	Q96I82	304 aa		27.86	■■■□□ 2.05
PTPN2-215	ENST00000592776	MYOZ2	Q9NPC6	264 aa		27.86	■■■□□ 2.05
PTPN2-215	ENST00000592776	SCAF8	Q9UPN6	1271 aa	Known RBP	27.86	■■■□□ 2.05
PTPN2-215	ENST00000592776	NBPF7	P0C2Y1	421 aa	Predicted RBP	27.85	■■■□□ 2.05
PTPN2-215	ENST00000592776	ANGEL2	Q5VTE6	544 aa	Known RBP	27.85	■■■□□ 2.05
PTPN2-215	ENST00000592776	ZNF646	O15015	1829 aa	Predicted RBP	27.84	■■■□□ 2.05
PTPN2-215	ENST00000592776	PLIN1	O60240	522 aa		27.84	■■■□□ 2.05
PTPN2-215	ENST00000592776	CTCF	P49711	727 aa	Predicted RBP	27.84	■■■□□ 2.05
PTPN2-215	ENST00000592776	CCDC57	Q2TAC2	916 aa		27.84	■■■□□ 2.05
PTPN2-215	ENST00000592776	IRS2	Q9Y4H2	1338 aa		27.84	■■■□□ 2.05
PTPN2-215	ENST00000592776	LBX1	P52954	281 aa		27.83	■■■□□ 2.05
PTPN2-215	ENST00000592776	CAPN15	O75808	1086 aa		27.82	■■■□□ 2.04
PTPN2-215	ENST00000592776	GTF2I	P78347	998 aa		27.82	■■■□□ 2.04
PTPN2-215	ENST00000592776	MAP2K1	Q02750	393 aa	Predicted RBP	27.82	■■■□□ 2.04
PTPN2-215	ENST00000592776	TAF7L	Q5H9L4	462 aa		27.82	■■■□□ 2.04
PTPN2-215	ENST00000592776	STRIP1	Q5VSL9	837 aa		27.82	■■■□□ 2.04
PTPN2-215	ENST00000592776	TTLL5	Q6EMB2	1281 aa		27.82	■■■□□ 2.04
PTPN2-215	ENST00000592776	SULF1	Q8IWU6	871 aa		27.82	■■■□□ 2.04
PTPN2-215	ENST00000592776	CD209	Q9NNX6	404 aa		27.82	■■■□□ 2.04
PTPN2-215	ENST00000592776	HUNK	P57058	714 aa		27.81	■■■□□ 2.04
PTPN2-215	ENST00000592776	NBPF9	Q3BBW0	867 aa		27.81	■■■□□ 2.04
PTPN2-215	ENST00000592776	LDHAL6A	Q6ZMR3	332 aa		27.81	■■■□□ 2.04
PTPN2-215	ENST00000592776	HSPA8	P11142	646 aa	Known RBP	27.8	■■■□□ 2.04
PTPN2-215	ENST00000592776	CDCA5	Q96FF9	252 aa		27.8	■■■□□ 2.04
PTPN2-215	ENST00000592776	ZIC5	Q96T25	663 aa		27.8	■■■□□ 2.04
PTPN2-215	ENST00000592776	PUS3	Q9BZE2	481 aa	Known RBP	27.8	■■■□□ 2.04
PTPN2-215	ENST00000592776	GBA2	Q9HCG7	927 aa	Predicted RBP	27.8	■■■□□ 2.04
PTPN2-215	ENST00000592776	CNNM1	Q9NRU3	951 aa		27.8	■■■□□ 2.04
PTPN2-215	ENST00000592776	THSD7B	Q9C0I4	1608 aa		27.8	■■■□□ 2.04
PTPN2-215	ENST00000592776		A0A1B0GUL6	1792 aa		27.8	■■■□□ 2.04
PTPN2-215	ENST00000592776	UTY	O14607	1347 aa		27.79	■■■□□ 2.04
PTPN2-215	ENST00000592776	CCER2	I3L3R5	266 aa		27.79	■■■□□ 2.04
PTPN2-215	ENST00000592776	TRMT2A	Q8IZ69	625 aa	Known RBP	27.79	■■■□□ 2.04
PTPN2-215	ENST00000592776	HHIPL1	Q96JK4	782 aa		27.79	■■■□□ 2.04
PTPN2-215	ENST00000592776	PTPRC	P08575	1304 aa		27.78	■■■□□ 2.04
PTPN2-215	ENST00000592776	KIAA0825	Q8IV33	1275 aa		27.78	■■■□□ 2.04
PTPN2-215	ENST00000592776	BICC1	Q9H694	974 aa	Known RBP	27.78	■■■□□ 2.04
PTPN2-215	ENST00000592776	PRDM10	Q9NQV6	1147 aa		27.78	■■■□□ 2.04
PTPN2-215	ENST00000592776	C2orf69	Q8N8R5	385 aa		27.77	■■■□□ 2.04
PTPN2-215	ENST00000592776	TSKS	Q9UJT2	592 aa		27.77	■■■□□ 2.04
PTPN2-215	ENST00000592776	MAP2K2	P36507	400 aa		27.76	■■■□□ 2.03
PTPN2-215	ENST00000592776	PRAMEF18	Q5VWM3	479 aa		27.76	■■■□□ 2.03
PTPN2-215	ENST00000592776	C15orf52	Q6ZUT6	534 aa	Known RBP	27.76	■■■□□ 2.03
PTPN2-215	ENST00000592776	JAG2	Q9Y219	1238 aa		27.76	■■■□□ 2.03
PTPN2-215	ENST00000592776	MYO3B	Q8WXR4	1341 aa		27.75	■■■□□ 2.03
PTPN2-215	ENST00000592776	SASH1	O94885	1247 aa		27.75	■■■□□ 2.03
PTPN2-215	ENST00000592776	OGFOD1	Q8N543	542 aa		27.75	■■■□□ 2.03
PTPN2-215	ENST00000592776	CERS5	Q8N5B7	392 aa		27.75	■■■□□ 2.03
PTPN2-215	ENST00000592776	ANKRD44	Q8N8A2	993 aa		27.75	■■■□□ 2.03
PTPN2-215	ENST00000592776	WNT10B	O00744	389 aa		27.74	■■■□□ 2.03
PTPN2-215	ENST00000592776	SMC4	Q9NTJ3	1288 aa		27.74	■■■□□ 2.03
PTPN2-215	ENST00000592776	ALDH1L2	Q3SY69	923 aa		27.73	■■■□□ 2.03
PTPN2-215	ENST00000592776	RGMB	Q6NW40	437 aa		27.73	■■■□□ 2.03
PTPN2-215	ENST00000592776	USP44	Q9H0E7	712 aa		27.73	■■■□□ 2.03
PTPN2-215	ENST00000592776	RABL6	Q3YEC7	729 aa	Predicted RBP	27.72	■■■□□ 2.03
PTPN2-215	ENST00000592776	MOB2	Q70IA6	237 aa		27.72	■■■□□ 2.03
PTPN2-215	ENST00000592776	ZNF804A	Q7Z570	1209 aa		27.72	■■■□□ 2.03
PTPN2-215	ENST00000592776	BEGAIN	Q9BUH8	593 aa		27.72	■■■□□ 2.03
PTPN2-215	ENST00000592776	PITPNM2	Q9BZ72	1349 aa		27.71	■■■□□ 2.03
PTPN2-215	ENST00000592776	FAM155A	B1AL88	458 aa	Predicted RBP	27.71	■■■□□ 2.03
PTPN2-215	ENST00000592776	IL1R1	P14778	569 aa		27.71	■■■□□ 2.03
PTPN2-215	ENST00000592776	LRRC24	Q50LG9	513 aa		27.71	■■■□□ 2.03
PTPN2-215	ENST00000592776	RIPOR2	Q9Y4F9	1068 aa		27.71	■■■□□ 2.03
PTPN2-215	ENST00000592776	PCDHAC2	Q9Y5I4	1007 aa		27.71	■■■□□ 2.03
PTPN2-215	ENST00000592776		F8W031	263 aa	Predicted RBP	27.7	■■■□□ 2.02
PTPN2-215	ENST00000592776	KLHDC4	Q8TBB5	520 aa		27.7	■■■□□ 2.02
PTPN2-215	ENST00000592776	GYG1	P46976	350 aa		27.69	■■■□□ 2.02
PTPN2-215	ENST00000592776	ZNF157	P51786	506 aa	Predicted RBP	27.69	■■■□□ 2.02
PTPN2-215	ENST00000592776	ZBED3	Q96IU2	234 aa	Predicted RBP	27.69	■■■□□ 2.02

Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms