RNA–Protein interactions for RNA: ENST00000589867.2

MBD1-221, Transcript of methyl-CpG binding domain protein 1, human

TSL 3

Gene MBD1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD1-221	ENST00000589867	GML	Q99445	158 aa		21.73	■■□□□ 1.07
MBD1-221	ENST00000589867	HTRA3	P83110	453 aa		21.72	■■□□□ 1.07
MBD1-221	ENST00000589867	PODN	Q7Z5L7	613 aa		21.72	■■□□□ 1.07
MBD1-221	ENST00000589867	PNMA8A	Q86V59	439 aa	Predicted RBP	21.72	■■□□□ 1.07
MBD1-221	ENST00000589867	DPF2	Q92785	391 aa		21.72	■■□□□ 1.07
MBD1-221	ENST00000589867	ADARB2	Q9NS39	739 aa	Known RBP	21.72	■■□□□ 1.07
MBD1-221	ENST00000589867	CNOT7	Q9UIV1	285 aa	Known RBP	21.72	■■□□□ 1.07
MBD1-221	ENST00000589867	EGFR	P00533	1210 aa		21.71	■■□□□ 1.07
MBD1-221	ENST00000589867	MICALL2	Q8IY33	904 aa		21.71	■■□□□ 1.07
MBD1-221	ENST00000589867	COA1	Q9GZY4	146 aa		21.71	■■□□□ 1.07
MBD1-221	ENST00000589867	PASK	Q96RG2	1323 aa		21.71	■■□□□ 1.07
MBD1-221	ENST00000589867	PLIN1	O60240	522 aa		21.7	■■□□□ 1.06
MBD1-221	ENST00000589867	MAP1S	Q66K74	1059 aa	Predicted RBP	21.7	■■□□□ 1.06
MBD1-221	ENST00000589867	USP50	Q70EL3	339 aa	Predicted RBP	21.7	■■□□□ 1.06
MBD1-221	ENST00000589867	MXD3	Q9BW11	206 aa		21.7	■■□□□ 1.06
MBD1-221	ENST00000589867	RPS12	P25398	132 aa	Known RBP	21.69	■■□□□ 1.06
MBD1-221	ENST00000589867	DACT2	Q5SW24	774 aa		21.69	■■□□□ 1.06
MBD1-221	ENST00000589867	RSBN1L	Q6PCB5	846 aa	Predicted RBP	21.69	■■□□□ 1.06
MBD1-221	ENST00000589867	ATG9A	Q7Z3C6	839 aa		21.69	■■□□□ 1.06
MBD1-221	ENST00000589867	CD209	Q9NNX6	404 aa		21.69	■■□□□ 1.06
MBD1-221	ENST00000589867	USP17L3	A6NCW0	530 aa		21.68	■■□□□ 1.06
MBD1-221	ENST00000589867	USP17L4	A6NCW7	530 aa		21.68	■■□□□ 1.06
MBD1-221	ENST00000589867		G3V3G9	751 aa		21.68	■■□□□ 1.06
MBD1-221	ENST00000589867	KCNJ4	P48050	445 aa		21.68	■■□□□ 1.06
MBD1-221	ENST00000589867	APLP1	P51693	650 aa		21.68	■■□□□ 1.06
MBD1-221	ENST00000589867	DCAF8	Q5TAQ9	597 aa		21.68	■■□□□ 1.06
MBD1-221	ENST00000589867	USP17L1	Q7RTZ2	530 aa		21.68	■■□□□ 1.06
MBD1-221	ENST00000589867	SAMD7	Q7Z3H4	446 aa		21.68	■■□□□ 1.06
MBD1-221	ENST00000589867	DNAJC5G	Q8N7S2	189 aa		21.68	■■□□□ 1.06
MBD1-221	ENST00000589867	PGAP2	Q9UHJ9	254 aa		21.68	■■□□□ 1.06
MBD1-221	ENST00000589867	POLR2A	P24928	1970 aa	Known RBP	21.67	■■□□□ 1.06
MBD1-221	ENST00000589867	MROH5	Q6ZUA9	1318 aa		21.67	■■□□□ 1.06
MBD1-221	ENST00000589867	EYA2	O00167	538 aa		21.67	■■□□□ 1.06
MBD1-221	ENST00000589867	GNAI3	P08754	354 aa		21.67	■■□□□ 1.06
MBD1-221	ENST00000589867	MTX1	Q13505	466 aa		21.67	■■□□□ 1.06
MBD1-221	ENST00000589867	UBE4A	Q14139	1066 aa		21.67	■■□□□ 1.06
MBD1-221	ENST00000589867	CNTROB	Q8N137	903 aa		21.67	■■□□□ 1.06
MBD1-221	ENST00000589867	PA2G4	Q9UQ80	394 aa	Known RBP	21.67	■■□□□ 1.06
MBD1-221	ENST00000589867	CLEC11A	Q9Y240	323 aa		21.67	■■□□□ 1.06
MBD1-221	ENST00000589867	IL1R1	P14778	569 aa		21.66	■■□□□ 1.06
MBD1-221	ENST00000589867	ZNF280A	P59817	542 aa	Predicted RBP	21.66	■■□□□ 1.06
MBD1-221	ENST00000589867	FMR1	Q06787	632 aa	Known RBP eCLIP	21.66	■■□□□ 1.06
MBD1-221	ENST00000589867	DZIP1L	Q8IYY4	767 aa	Known RBP	21.66	■■□□□ 1.06
MBD1-221	ENST00000589867	AGBL3	Q8NEM8	1001 aa		21.66	■■□□□ 1.06
MBD1-221	ENST00000589867	PDE8B	O95263	885 aa		21.65	■■□□□ 1.06
MBD1-221	ENST00000589867	FGFR2	P21802	821 aa		21.65	■■□□□ 1.06
MBD1-221	ENST00000589867	STRIP1	Q5VSL9	837 aa		21.65	■■□□□ 1.06
MBD1-221	ENST00000589867	FAM84B	Q96KN1	310 aa	Predicted RBP	21.65	■■□□□ 1.06
MBD1-221	ENST00000589867		H7C1D1	291 aa		21.64	■■□□□ 1.05
MBD1-221	ENST00000589867	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	21.64	■■□□□ 1.05
MBD1-221	ENST00000589867	METTL24	Q5JXM2	366 aa		21.64	■■□□□ 1.05
MBD1-221	ENST00000589867	CERS5	Q8N5B7	392 aa		21.64	■■□□□ 1.05
MBD1-221	ENST00000589867	PANK1	Q8TE04	598 aa		21.64	■■□□□ 1.05
MBD1-221	ENST00000589867	COPRS	Q9NQ92	184 aa		21.64	■■□□□ 1.05
MBD1-221	ENST00000589867	ZBTB7B	O15156	539 aa	Predicted RBP	21.63	■■□□□ 1.05
MBD1-221	ENST00000589867	GYG1	P46976	350 aa		21.63	■■□□□ 1.05
MBD1-221	ENST00000589867	GTF2I	P78347	998 aa		21.63	■■□□□ 1.05
MBD1-221	ENST00000589867	TTLL5	Q6EMB2	1281 aa		21.63	■■□□□ 1.05
MBD1-221	ENST00000589867	RCAN3	Q9UKA8	241 aa		21.63	■■□□□ 1.05
MBD1-221	ENST00000589867	ASTN2	O75129	1339 aa	Predicted RBP	21.62	■■□□□ 1.05
MBD1-221	ENST00000589867	PNMA6E	A0A0J9YXQ4	647 aa		21.62	■■□□□ 1.05
MBD1-221	ENST00000589867	CIAO1	O76071	339 aa		21.62	■■□□□ 1.05
MBD1-221	ENST00000589867	GNAI2	P04899	355 aa		21.62	■■□□□ 1.05
MBD1-221	ENST00000589867	FBXO33	Q7Z6M2	555 aa		21.62	■■□□□ 1.05
MBD1-221	ENST00000589867	TDRD7	Q8NHU6	1098 aa	Known RBP	21.62	■■□□□ 1.05
MBD1-221	ENST00000589867	SIL1	Q9H173	461 aa		21.62	■■□□□ 1.05
MBD1-221	ENST00000589867	HDAC5	Q9UQL6	1122 aa		21.62	■■□□□ 1.05
MBD1-221	ENST00000589867	TRAF5	O00463	557 aa		21.61	■■□□□ 1.05
MBD1-221	ENST00000589867	ZC3H15	Q8WU90	426 aa	Known RBP	21.61	■■□□□ 1.05
MBD1-221	ENST00000589867	FBXO3	Q9UK99	471 aa		21.61	■■□□□ 1.05
MBD1-221	ENST00000589867	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	21.61	■■□□□ 1.05
MBD1-221	ENST00000589867	PCNT	O95613	3336 aa		21.6	■■□□□ 1.05
MBD1-221	ENST00000589867	SRGAP3	O43295	1099 aa		21.6	■■□□□ 1.05
MBD1-221	ENST00000589867	USP17L8	P0C7I0	530 aa		21.6	■■□□□ 1.05
MBD1-221	ENST00000589867	RBM26	Q5T8P6	1007 aa	Known RBP	21.6	■■□□□ 1.05
MBD1-221	ENST00000589867	DLK2	Q6UY11	383 aa		21.6	■■□□□ 1.05
MBD1-221	ENST00000589867	ZNF804A	Q7Z570	1209 aa		21.6	■■□□□ 1.05
MBD1-221	ENST00000589867	FTSJ3	Q8IY81	847 aa	Known RBP	21.6	■■□□□ 1.05
MBD1-221	ENST00000589867	GLIS2	Q9BZE0	524 aa	Predicted RBP	21.6	■■□□□ 1.05
MBD1-221	ENST00000589867	TRPM7	Q96QT4	1865 aa		21.6	■■□□□ 1.05
MBD1-221	ENST00000589867	FAM205A	Q6ZU69	1335 aa		21.59	■■□□□ 1.05
MBD1-221	ENST00000589867	HIBADH	P31937	336 aa	Known RBP	21.59	■■□□□ 1.05
MBD1-221	ENST00000589867	KIF4B	Q2VIQ3	1234 aa		21.59	■■□□□ 1.05
MBD1-221	ENST00000589867	ITPRIP	Q8IWB1	547 aa		21.59	■■□□□ 1.05
MBD1-221	ENST00000589867	FBXW7	Q969H0	707 aa		21.59	■■□□□ 1.05
MBD1-221	ENST00000589867	C1orf115	Q9H7X2	142 aa		21.59	■■□□□ 1.05
MBD1-221	ENST00000589867	JAG2	Q9Y219	1238 aa		21.59	■■□□□ 1.05
MBD1-221	ENST00000589867	SASH1	O94885	1247 aa		21.57	■■□□□ 1.04
MBD1-221	ENST00000589867	BCAM	P50895	628 aa		21.57	■■□□□ 1.04
MBD1-221	ENST00000589867	POLA2	Q14181	598 aa		21.57	■■□□□ 1.04
MBD1-221	ENST00000589867	PUM3	Q15397	648 aa	Known RBP	21.57	■■□□□ 1.04
MBD1-221	ENST00000589867	CST9	Q5W186	159 aa		21.57	■■□□□ 1.04
MBD1-221	ENST00000589867	MYOZ2	Q9NPC6	264 aa		21.57	■■□□□ 1.04
MBD1-221	ENST00000589867	CREBZF	Q9NS37	354 aa		21.57	■■□□□ 1.04
MBD1-221	ENST00000589867	MYO3B	Q8WXR4	1341 aa		21.56	■■□□□ 1.04
MBD1-221	ENST00000589867	IL15	P40933	162 aa	Predicted RBP	21.56	■■□□□ 1.04
MBD1-221	ENST00000589867	KIAA0825	Q8IV33	1275 aa		21.56	■■□□□ 1.04
MBD1-221	ENST00000589867	ZBED3	Q96IU2	234 aa	Predicted RBP	21.56	■■□□□ 1.04
MBD1-221	ENST00000589867	FKBP1A	P62942	108 aa	Known RBP	21.55	■■□□□ 1.04
MBD1-221	ENST00000589867	ATP8B2	P98198	1209 aa		21.55	■■□□□ 1.04

Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms