RNA–Protein interactions for RNA: ENST00000589538.5

DNMT1-221, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-221ENST00000589538 PUS3Q9BZE2 481 aaKnown RBP20.5■□□□□ 0.87
DNMT1-221ENST00000589538 RCAN3Q9UKA8 241 aa20.5■□□□□ 0.87
DNMT1-221ENST00000589538 TNNQ9UQP3 1299 aa20.5■□□□□ 0.87
DNMT1-221ENST00000589538 CLEC11AQ9Y240 323 aa20.5■□□□□ 0.87
DNMT1-221ENST00000589538 ZNF609O15014 1411 aa20.5■□□□□ 0.87
DNMT1-221ENST00000589538 ADAMTSL1Q8N6G6 1762 aa20.49■□□□□ 0.87
DNMT1-221ENST00000589538 APLP1P51693 650 aa20.49■□□□□ 0.87
DNMT1-221ENST00000589538 METTL24Q5JXM2 366 aa20.49■□□□□ 0.87
DNMT1-221ENST00000589538 ZNF804AQ7Z570 1209 aa20.49■□□□□ 0.87
DNMT1-221ENST00000589538 AGBL3Q8NEM8 1001 aa20.49■□□□□ 0.87
DNMT1-221ENST00000589538 CNOT7Q9UIV1 285 aaKnown RBP20.49■□□□□ 0.87
DNMT1-221ENST00000589538 RFX5P48382 616 aaPredicted RBP20.48■□□□□ 0.87
DNMT1-221ENST00000589538 RSBN1LQ6PCB5 846 aaPredicted RBP20.48■□□□□ 0.87
DNMT1-221ENST00000589538 TXNRD3Q86VQ6 643 aa20.48■□□□□ 0.87
DNMT1-221ENST00000589538 KCNQ5Q9NR82 932 aa20.48■□□□□ 0.87
DNMT1-221ENST00000589538 EYA2O00167 538 aa20.47■□□□□ 0.87
DNMT1-221ENST00000589538 CIAO1O76071 339 aa20.47■□□□□ 0.87
DNMT1-221ENST00000589538 POTEIP0CG38 1075 aa20.47■□□□□ 0.87
DNMT1-221ENST00000589538 POTEJP0CG39 1038 aa20.47■□□□□ 0.87
DNMT1-221ENST00000589538 MMP14P50281 582 aa20.47■□□□□ 0.87
DNMT1-221ENST00000589538 PTPN12Q05209 780 aaKnown RBP20.47■□□□□ 0.87
DNMT1-221ENST00000589538 MTX1Q13505 466 aa20.47■□□□□ 0.87
DNMT1-221ENST00000589538 LRRC24Q50LG9 513 aa20.47■□□□□ 0.87
DNMT1-221ENST00000589538 STRIP1Q5VSL9 837 aa20.47■□□□□ 0.87
DNMT1-221ENST00000589538 ITPRIPQ8IWB1 547 aa20.47■□□□□ 0.87
DNMT1-221ENST00000589538 ZBTB12Q9Y330 459 aaPredicted RBP20.47■□□□□ 0.87
DNMT1-221ENST00000589538 MYO3BQ8WXR4 1341 aa20.47■□□□□ 0.87
DNMT1-221ENST00000589538 IRS2Q9Y4H2 1338 aa20.47■□□□□ 0.87
DNMT1-221ENST00000589538 PDE8BO95263 885 aa20.46■□□□□ 0.87
DNMT1-221ENST00000589538 MICALL2Q8IY33 904 aa20.46■□□□□ 0.87
DNMT1-221ENST00000589538 KLHDC4Q8TBB5 520 aa20.46■□□□□ 0.87
DNMT1-221ENST00000589538 CD209Q9NNX6 404 aa20.46■□□□□ 0.87
DNMT1-221ENST00000589538 SNAP23O00161 211 aa20.45■□□□□ 0.86
DNMT1-221ENST00000589538 KLRK1P26718 216 aa20.45■□□□□ 0.86
DNMT1-221ENST00000589538 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.45■□□□□ 0.86
DNMT1-221ENST00000589538 ZC3H15Q8WU90 426 aaKnown RBP20.45■□□□□ 0.86
DNMT1-221ENST00000589538 SRGAP3O43295 1099 aa20.44■□□□□ 0.86
DNMT1-221ENST00000589538 RLBP1P12271 317 aa20.44■□□□□ 0.86
DNMT1-221ENST00000589538 IL1R1P14778 569 aa20.44■□□□□ 0.86
DNMT1-221ENST00000589538 TTLL5Q6EMB2 1281 aa20.44■□□□□ 0.86
DNMT1-221ENST00000589538 VGLL2Q8N8G2 317 aa20.44■□□□□ 0.86
DNMT1-221ENST00000589538 COPRSQ9NQ92 184 aa20.44■□□□□ 0.86
DNMT1-221ENST00000589538 IL15P40933 162 aaPredicted RBP20.43■□□□□ 0.86
DNMT1-221ENST00000589538 PUM3Q15397 648 aaKnown RBP20.43■□□□□ 0.86
DNMT1-221ENST00000589538 CAVIN4Q5BKX8 364 aa20.43■□□□□ 0.86
DNMT1-221ENST00000589538 DACT2Q5SW24 774 aa20.43■□□□□ 0.86
DNMT1-221ENST00000589538 FBXW7Q969H0 707 aa20.43■□□□□ 0.86
DNMT1-221ENST00000589538 CEP126Q9P2H0 1117 aa20.43■□□□□ 0.86
DNMT1-221ENST00000589538 IFIT1P09914 478 aaKnown RBP20.42■□□□□ 0.86
DNMT1-221ENST00000589538 HIBADHP31937 336 aaKnown RBP20.42■□□□□ 0.86
DNMT1-221ENST00000589538 CNTROBQ8N137 903 aa20.42■□□□□ 0.86
DNMT1-221ENST00000589538 GMLQ99445 158 aa20.42■□□□□ 0.86
DNMT1-221ENST00000589538 CHMP4BQ9H444 224 aaKnown RBP20.42■□□□□ 0.86
DNMT1-221ENST00000589538 PGAP2Q9UHJ9 254 aa20.42■□□□□ 0.86
DNMT1-221ENST00000589538 ZBTB7BO15156 539 aaPredicted RBP20.41■□□□□ 0.86
DNMT1-221ENST00000589538 USP17L8P0C7I0 530 aa20.41■□□□□ 0.86
DNMT1-221ENST00000589538 ZNF280AP59817 542 aaPredicted RBP20.41■□□□□ 0.86
DNMT1-221ENST00000589538 GTF2IP78347 998 aa20.41■□□□□ 0.86
DNMT1-221ENST00000589538 ATG9AQ7Z3C6 839 aa20.41■□□□□ 0.86
DNMT1-221ENST00000589538 VPS37DQ86XT2 251 aa20.41■□□□□ 0.86
DNMT1-221ENST00000589538 OGFOD1Q8N543 542 aa20.41■□□□□ 0.86
DNMT1-221ENST00000589538 SIL1Q9H173 461 aa20.41■□□□□ 0.86
DNMT1-221ENST00000589538 ZNF646O15015 1829 aaPredicted RBP20.41■□□□□ 0.86
DNMT1-221ENST00000589538 SLC5A1P13866 664 aa20.4■□□□□ 0.86
DNMT1-221ENST00000589538 FKBP1AP62942 108 aaKnown RBP20.4■□□□□ 0.86
DNMT1-221ENST00000589538 MAP1SQ66K74 1059 aaPredicted RBP20.4■□□□□ 0.86
DNMT1-221ENST00000589538 PANK1Q8TE04 598 aa20.4■□□□□ 0.86
DNMT1-221ENST00000589538 LPIN2Q92539 896 aa20.4■□□□□ 0.86
DNMT1-221ENST00000589538 PASKQ96RG2 1323 aa20.39■□□□□ 0.85
DNMT1-221ENST00000589538 SASH1O94885 1247 aa20.39■□□□□ 0.85
DNMT1-221ENST00000589538 ITGBL1O95965 494 aaPredicted RBP20.39■□□□□ 0.85
DNMT1-221ENST00000589538 FGFR2P21802 821 aa20.39■□□□□ 0.85
DNMT1-221ENST00000589538 KIF4BQ2VIQ3 1234 aa20.39■□□□□ 0.85
DNMT1-221ENST00000589538 SAMD7Q7Z3H4 446 aa20.39■□□□□ 0.85
DNMT1-221ENST00000589538 TDRD7Q8NHU6 1098 aaKnown RBP20.39■□□□□ 0.85
DNMT1-221ENST00000589538 TRPM4Q8TD43 1214 aa20.39■□□□□ 0.85
DNMT1-221ENST00000589538 FAM84BQ96KN1 310 aaPredicted RBP20.39■□□□□ 0.85
DNMT1-221ENST00000589538 HDAC9Q9UKV0 1011 aa20.39■□□□□ 0.85
DNMT1-221ENST00000589538 PA2G4Q9UQ80 394 aaKnown RBP20.39■□□□□ 0.85
DNMT1-221ENST00000589538 SHTN1A0MZ66 631 aa20.38■□□□□ 0.85
DNMT1-221ENST00000589538 GYG1P46976 350 aa20.38■□□□□ 0.85
DNMT1-221ENST00000589538 PDE3AQ14432 1141 aa20.38■□□□□ 0.85
DNMT1-221ENST00000589538 MVPQ14764 893 aaKnown RBP20.38■□□□□ 0.85
DNMT1-221ENST00000589538 TBC1D10BQ4KMP7 808 aaPredicted RBP20.38■□□□□ 0.85
DNMT1-221ENST00000589538 FBXO33Q7Z6M2 555 aa20.38■□□□□ 0.85
DNMT1-221ENST00000589538 YTHDC1Q96MU7 727 aaKnown RBP20.38■□□□□ 0.85
DNMT1-221ENST00000589538 DDX19BQ9UMR2 479 aa20.38■□□□□ 0.85
DNMT1-221ENST00000589538 FAM205AQ6ZU69 1335 aa20.37■□□□□ 0.85
DNMT1-221ENST00000589538 HIRAP54198 1017 aaPredicted RBP20.37■□□□□ 0.85
DNMT1-221ENST00000589538 ATP8B2P98198 1209 aa20.37■□□□□ 0.85
DNMT1-221ENST00000589538 FRAT2O75474 233 aaPredicted RBP20.36■□□□□ 0.85
DNMT1-221ENST00000589538 ATP2B3Q16720 1220 aa20.36■□□□□ 0.85
DNMT1-221ENST00000589538 RBM26Q5T8P6 1007 aaKnown RBP20.36■□□□□ 0.85
DNMT1-221ENST00000589538 CDC37L1Q7L3B6 337 aa20.36■□□□□ 0.85
DNMT1-221ENST00000589538 MYOZ2Q9NPC6 264 aa20.36■□□□□ 0.85
DNMT1-221ENST00000589538 CREBZFQ9NS37 354 aa20.36■□□□□ 0.85
DNMT1-221ENST00000589538 AKAP2Q9Y2D5 859 aa20.36■□□□□ 0.85
DNMT1-221ENST00000589538 PNMA6EA0A0J9YXQ4 647 aa20.35■□□□□ 0.85
DNMT1-221ENST00000589538 G3BP1Q13283 466 aaKnown RBP eCLIP20.35■□□□□ 0.853e-8■□□□□ 9.4
DNMT1-221ENST00000589538 SSH3Q8TE77 659 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 411 ms