RNA–Protein interactions for RNA: ENST00000588712.5

NEDD4L-224, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 2,066 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-224ENST00000588712 ATP6V0A2Q9Y487 856 aa12.81□□□□□ -0.36
NEDD4L-224ENST00000588712 ANKRD31Q8N7Z5 1873 aa12.81□□□□□ -0.36
NEDD4L-224ENST00000588712 C15orf52Q6ZUT6 534 aaKnown RBP12.81□□□□□ -0.36
NEDD4L-224ENST00000588712 FSD1Q9BTV5 496 aa12.81□□□□□ -0.36
NEDD4L-224ENST00000588712 DIAPH3Q9NSV4 1193 aa12.81□□□□□ -0.36
NEDD4L-224ENST00000588712 ARAP2Q8WZ64 1704 aa12.8□□□□□ -0.36
NEDD4L-224ENST00000588712 AK9Q5TCS8 1911 aa12.8□□□□□ -0.36
NEDD4L-224ENST00000588712 IGSF3O75054 1194 aa12.8□□□□□ -0.36
NEDD4L-224ENST00000588712 CC2D2BQ6DHV5 1058 aa12.8□□□□□ -0.36
NEDD4L-224ENST00000588712 ZNF622Q969S3 477 aaKnown RBP eCLIP12.8□□□□□ -0.36
NEDD4L-224ENST00000588712 DNAJC2Q99543 621 aaKnown RBP12.8□□□□□ -0.36
NEDD4L-224ENST00000588712 PDGFDQ9GZP0 370 aaPredicted RBP12.8□□□□□ -0.36
NEDD4L-224ENST00000588712 TAF1P21675 1872 aa12.79□□□□□ -0.36
NEDD4L-224ENST00000588712 MAP4K4O95819 1239 aaPredicted RBP12.79□□□□□ -0.36
NEDD4L-224ENST00000588712 ZFYP08048 801 aaPredicted RBP12.79□□□□□ -0.36
NEDD4L-224ENST00000588712 FKBP4Q02790 459 aaKnown RBP eCLIP12.79□□□□□ -0.36
NEDD4L-224ENST00000588712 R3HDM1Q15032 1099 aaKnown RBP12.79□□□□□ -0.36
NEDD4L-224ENST00000588712 ZSCAN25Q6NSZ9 544 aa12.79□□□□□ -0.36
NEDD4L-224ENST00000588712 KBTBD3Q8NAB2 608 aa12.79□□□□□ -0.36
NEDD4L-224ENST00000588712 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.79□□□□□ -0.36
NEDD4L-224ENST00000588712 C10orf71Q711Q0 1435 aa12.79□□□□□ -0.36
NEDD4L-224ENST00000588712 TGFB2P61812 414 aa12.79□□□□□ -0.36
NEDD4L-224ENST00000588712 GGA1Q9UJY5 639 aa12.79□□□□□ -0.36
NEDD4L-224ENST00000588712 NSFL1CQ9UNZ2 370 aaKnown RBP12.79□□□□□ -0.36
NEDD4L-224ENST00000588712 RBM19Q9Y4C8 960 aaKnown RBP12.79□□□□□ -0.36
NEDD4L-224ENST00000588712 HIBADHP31937 336 aaKnown RBP12.78□□□□□ -0.36
NEDD4L-224ENST00000588712 SPATA5Q8NB90 893 aa12.78□□□□□ -0.36
NEDD4L-224ENST00000588712 ESYT1Q9BSJ8 1104 aa12.78□□□□□ -0.36
NEDD4L-224ENST00000588712 DENND2AQ9ULE3 1009 aa12.78□□□□□ -0.36
NEDD4L-224ENST00000588712 PDS5AQ29RF7 1337 aaKnown RBP12.78□□□□□ -0.36
NEDD4L-224ENST00000588712 RAD50Q92878 1312 aa12.78□□□□□ -0.36
NEDD4L-224ENST00000588712 GOLIM4O00461 696 aa12.77□□□□□ -0.36
NEDD4L-224ENST00000588712 ZBTB7AO95365 584 aa12.77□□□□□ -0.36
NEDD4L-224ENST00000588712 PHKA1P46020 1223 aa12.77□□□□□ -0.36
NEDD4L-224ENST00000588712 MFAP1P55081 439 aaKnown RBP12.77□□□□□ -0.36
NEDD4L-224ENST00000588712 TMED8Q6PL24 325 aaPredicted RBP12.77□□□□□ -0.36
NEDD4L-224ENST00000588712 KIAA1211Q6ZU35 1233 aa12.77□□□□□ -0.36
NEDD4L-224ENST00000588712 ZNF804AQ7Z570 1209 aa12.77□□□□□ -0.36
NEDD4L-224ENST00000588712 FBXO33Q7Z6M2 555 aa12.77□□□□□ -0.36
NEDD4L-224ENST00000588712 A0A1B0GUL6 1792 aa12.77□□□□□ -0.37
NEDD4L-224ENST00000588712 SEC24BO95487 1268 aa12.77□□□□□ -0.37
NEDD4L-224ENST00000588712 MCAMP43121 646 aa12.77□□□□□ -0.37
NEDD4L-224ENST00000588712 BCAMP50895 628 aa12.77□□□□□ -0.37
NEDD4L-224ENST00000588712 GPSM2P81274 684 aa12.77□□□□□ -0.37
NEDD4L-224ENST00000588712 MPNDQ8N594 471 aa12.77□□□□□ -0.37
NEDD4L-224ENST00000588712 FAM84BQ96KN1 310 aaPredicted RBP12.77□□□□□ -0.37
NEDD4L-224ENST00000588712 FRAT2O75474 233 aaPredicted RBP12.76□□□□□ -0.37
NEDD4L-224ENST00000588712 EYA3Q99504 573 aa12.76□□□□□ -0.37
NEDD4L-224ENST00000588712 C22orf23Q9BZE7 217 aa12.76□□□□□ -0.37
NEDD4L-224ENST00000588712 COL4A1P02462 1669 aa12.76□□□□□ -0.37
NEDD4L-224ENST00000588712 UFL1O94874 794 aa12.76□□□□□ -0.37
NEDD4L-224ENST00000588712 ZAP70P43403 619 aa12.76□□□□□ -0.37
NEDD4L-224ENST00000588712 WASHC4Q2M389 1173 aa12.76□□□□□ -0.37
NEDD4L-224ENST00000588712 TTLL6Q8N841 843 aa12.76□□□□□ -0.37
NEDD4L-224ENST00000588712 HELLSQ9NRZ9 838 aa12.76□□□□□ -0.37
NEDD4L-224ENST00000588712 HMG20BQ9P0W2 317 aa12.76□□□□□ -0.37
NEDD4L-224ENST00000588712 ATF5Q9Y2D1 282 aaPredicted RBP12.76□□□□□ -0.37
NEDD4L-224ENST00000588712 CD2APQ9Y5K6 639 aa12.76□□□□□ -0.37
NEDD4L-224ENST00000588712 RNF113AO15541 343 aaKnown RBP12.75□□□□□ -0.37
NEDD4L-224ENST00000588712 SGSM2O43147 1006 aa12.75□□□□□ -0.37
NEDD4L-224ENST00000588712 MCCP23508 829 aa12.75□□□□□ -0.37
NEDD4L-224ENST00000588712 ANP32AP39687 249 aaKnown RBP12.75□□□□□ -0.37
NEDD4L-224ENST00000588712 GYG1P46976 350 aa12.75□□□□□ -0.37
NEDD4L-224ENST00000588712 MAP3K12Q12852 859 aa12.75□□□□□ -0.37
NEDD4L-224ENST00000588712 RASGRF1Q13972 1273 aa12.75□□□□□ -0.37
NEDD4L-224ENST00000588712 SOGA3Q5TF21 947 aa12.75□□□□□ -0.37
NEDD4L-224ENST00000588712 PRPF40BQ6NWY9 871 aaKnown RBP12.75□□□□□ -0.37
NEDD4L-224ENST00000588712 CWC27Q6UX04 472 aaKnown RBP12.75□□□□□ -0.37
NEDD4L-224ENST00000588712 DPP8Q6V1X1 898 aaPredicted RBP12.75□□□□□ -0.37
NEDD4L-224ENST00000588712 IL27Q8NEV9 243 aa12.75□□□□□ -0.37
NEDD4L-224ENST00000588712 TBC1D16Q8TBP0 767 aa12.75□□□□□ -0.37
NEDD4L-224ENST00000588712 LRRC37AA6NMS7 1700 aa12.75□□□□□ -0.37
NEDD4L-224ENST00000588712 MED23Q9ULK4 1368 aa12.75□□□□□ -0.37
NEDD4L-224ENST00000588712 C6orf229H3BNL8 230 aa12.74□□□□□ -0.37
NEDD4L-224ENST00000588712 SNAP23O00161 211 aa12.74□□□□□ -0.37
NEDD4L-224ENST00000588712 ZGPATQ8N5A5 531 aaKnown RBP12.74□□□□□ -0.37
NEDD4L-224ENST00000588712 SUPT20HQ8NEM7 779 aa12.74□□□□□ -0.37
NEDD4L-224ENST00000588712 TBC1D32Q96NH3 1257 aa12.74□□□□□ -0.37
NEDD4L-224ENST00000588712 SNRKQ9NRH2 765 aa12.74□□□□□ -0.37
NEDD4L-224ENST00000588712 CHRNA5P30532 468 aa12.74□□□□□ -0.37
NEDD4L-224ENST00000588712 RBM25P49756 843 aaKnown RBP12.74□□□□□ -0.37
NEDD4L-224ENST00000588712 SCARF1Q14162 830 aa12.74□□□□□ -0.37
NEDD4L-224ENST00000588712 MCMDC2Q4G0Z9 681 aa12.74□□□□□ -0.37
NEDD4L-224ENST00000588712 USP26Q9BXU7 913 aa12.74□□□□□ -0.37
NEDD4L-224ENST00000588712 ZC3H12CQ9C0D7 883 aaKnown RBP12.74□□□□□ -0.37
NEDD4L-224ENST00000588712 KIF13BQ9NQT8 1826 aa12.74□□□□□ -0.37
NEDD4L-224ENST00000588712 CYP2E1P05181 493 aaPredicted RBP12.73□□□□□ -0.37
NEDD4L-224ENST00000588712 SPTY2D1Q68D10 685 aaPredicted RBP12.73□□□□□ -0.37
NEDD4L-224ENST00000588712 ANO2Q9NQ90 1003 aa12.73□□□□□ -0.37
NEDD4L-224ENST00000588712 PIM2Q9P1W9 311 aa12.73□□□□□ -0.37
NEDD4L-224ENST00000588712 COL11A2P13942 1736 aaPredicted RBP12.73□□□□□ -0.37
NEDD4L-224ENST00000588712 IRS2Q9Y4H2 1338 aa12.73□□□□□ -0.37
NEDD4L-224ENST00000588712 AKAP11Q9UKA4 1901 aa12.73□□□□□ -0.37
NEDD4L-224ENST00000588712 NMIQ13287 307 aaPredicted RBP12.73□□□□□ -0.37
NEDD4L-224ENST00000588712 UBE3CQ15386 1083 aa12.73□□□□□ -0.37
NEDD4L-224ENST00000588712 RTKN2Q8IZC4 609 aa12.73□□□□□ -0.37
NEDD4L-224ENST00000588712 WDR66Q8TBY9 1149 aa12.73□□□□□ -0.37
NEDD4L-224ENST00000588712 EDC3Q96F86 508 aaKnown RBP12.73□□□□□ -0.37
NEDD4L-224ENST00000588712 COA1Q9GZY4 146 aa12.73□□□□□ -0.37
NEDD4L-224ENST00000588712 SPON1Q9HCB6 807 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms