RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 CHD4Q14839 1912 aa17.68■□□□□ 0.42
CCDC43-203ENST00000588210 IGHMBP2P38935 993 aaKnown RBP17.68■□□□□ 0.42
CCDC43-203ENST00000588210 KLHL40Q2TBA0 621 aa17.68■□□□□ 0.42
CCDC43-203ENST00000588210 GAS2L3Q86XJ1 694 aa17.68■□□□□ 0.42
CCDC43-203ENST00000588210 CWC22Q9HCG8 908 aaKnown RBP17.68■□□□□ 0.42
CCDC43-203ENST00000588210 COL4A1P02462 1669 aa17.68■□□□□ 0.42
CCDC43-203ENST00000588210 FKBP4Q02790 459 aaKnown RBP eCLIP17.67■□□□□ 0.42
CCDC43-203ENST00000588210 PSMD1Q99460 953 aa17.67■□□□□ 0.42
CCDC43-203ENST00000588210 BSDC1Q9NW68 430 aaPredicted RBP17.67■□□□□ 0.42
CCDC43-203ENST00000588210 RASSF7Q02833 373 aa17.67■□□□□ 0.42
CCDC43-203ENST00000588210 CLCN1P35523 988 aa17.66■□□□□ 0.42
CCDC43-203ENST00000588210 LRRFIP2Q9Y608 721 aaKnown RBP17.66■□□□□ 0.42
CCDC43-203ENST00000588210 LRRC37AA6NMS7 1700 aa17.66■□□□□ 0.42
CCDC43-203ENST00000588210 LMNB1P20700 586 aa17.65■□□□□ 0.42
CCDC43-203ENST00000588210 MPNDQ8N594 471 aa17.65■□□□□ 0.42
CCDC43-203ENST00000588210 MPHOSPH8Q99549 860 aa17.65■□□□□ 0.42
CCDC43-203ENST00000588210 SLC51AQ86UW1 340 aa17.65■□□□□ 0.42
CCDC43-203ENST00000588210 TAF7LQ5H9L4 462 aa17.64■□□□□ 0.41
CCDC43-203ENST00000588210 DPP8Q6V1X1 898 aaPredicted RBP17.64■□□□□ 0.41
CCDC43-203ENST00000588210 SBF1O95248 1867 aa17.64■□□□□ 0.41
CCDC43-203ENST00000588210 SUPT20HQ8NEM7 779 aa17.63■□□□□ 0.41
CCDC43-203ENST00000588210 RTFDC1Q9BY42 306 aaPredicted RBP17.63■□□□□ 0.41
CCDC43-203ENST00000588210 LRRCC1Q9C099 1032 aa17.63■□□□□ 0.41
CCDC43-203ENST00000588210 NSFL1CQ9UNZ2 370 aaKnown RBP17.63■□□□□ 0.41
CCDC43-203ENST00000588210 C9orf131Q5VYM1 1079 aa17.63■□□□□ 0.41
CCDC43-203ENST00000588210 PODXL2Q9NZ53 605 aa17.63■□□□□ 0.41
CCDC43-203ENST00000588210 MINPP1Q9UNW1 487 aa17.63■□□□□ 0.41
CCDC43-203ENST00000588210 EXOC6BQ9Y2D4 811 aa17.63■□□□□ 0.41
CCDC43-203ENST00000588210 DDX49Q9Y6V7 483 aaKnown RBP17.63■□□□□ 0.41
CCDC43-203ENST00000588210 PRELPP51888 382 aa17.62■□□□□ 0.41
CCDC43-203ENST00000588210 ATP8B2P98198 1209 aa17.62■□□□□ 0.41
CCDC43-203ENST00000588210 VPS33BQ9H267 617 aa17.62■□□□□ 0.41
CCDC43-203ENST00000588210 RNF181Q9P0P0 153 aa17.62■□□□□ 0.41
CCDC43-203ENST00000588210 GPSM2P81274 684 aa17.62■□□□□ 0.41
CCDC43-203ENST00000588210 LDHAL6AQ6ZMR3 332 aa17.62■□□□□ 0.41
CCDC43-203ENST00000588210 ZNF594Q96JF6 807 aaPredicted RBP17.62■□□□□ 0.41
CCDC43-203ENST00000588210 ANKIB1Q9P2G1 1089 aa17.62■□□□□ 0.41
CCDC43-203ENST00000588210 MX1P20591 662 aa17.61■□□□□ 0.41
CCDC43-203ENST00000588210 MTX1Q13505 466 aa17.61■□□□□ 0.41
CCDC43-203ENST00000588210 ESYT1Q9BSJ8 1104 aa17.61■□□□□ 0.41
CCDC43-203ENST00000588210 ZNF277Q9NRM2 450 aaPredicted RBP17.61■□□□□ 0.41
CCDC43-203ENST00000588210 SPEF2Q9C093 1822 aa17.61■□□□□ 0.41
CCDC43-203ENST00000588210 XDHP47989 1333 aa17.61■□□□□ 0.41
CCDC43-203ENST00000588210 AOX1Q06278 1338 aa17.61■□□□□ 0.41
CCDC43-203ENST00000588210 IARSP41252 1262 aaKnown RBP17.6■□□□□ 0.41
CCDC43-203ENST00000588210 MCTP1Q6DN14 999 aa17.6■□□□□ 0.41
CCDC43-203ENST00000588210 STAP2Q9UGK3 403 aa17.6■□□□□ 0.41
CCDC43-203ENST00000588210 CCDC88AQ3V6T2 1871 aa17.6■□□□□ 0.41
CCDC43-203ENST00000588210 PNMA6EA0A0J9YXQ4 647 aa17.6■□□□□ 0.41
CCDC43-203ENST00000588210 RFX5P48382 616 aaPredicted RBP17.6■□□□□ 0.41
CCDC43-203ENST00000588210 ZNF445P59923 1031 aa17.6■□□□□ 0.41
CCDC43-203ENST00000588210 ANKRD2Q9GZV1 360 aa17.6■□□□□ 0.41
CCDC43-203ENST00000588210 CNNM1Q9NRU3 951 aa17.6■□□□□ 0.41
CCDC43-203ENST00000588210 LMBRD1Q9NUN5 540 aa17.6■□□□□ 0.41
CCDC43-203ENST00000588210 MCM2P49736 904 aa17.59■□□□□ 0.41
CCDC43-203ENST00000588210 PKP1Q13835 747 aa17.59■□□□□ 0.41
CCDC43-203ENST00000588210 ZGPATQ8N5A5 531 aaKnown RBP17.59■□□□□ 0.41
CCDC43-203ENST00000588210 TBC1D16Q8TBP0 767 aa17.59■□□□□ 0.41
CCDC43-203ENST00000588210 IL17RAQ96F46 866 aa17.59■□□□□ 0.41
CCDC43-203ENST00000588210 POLLQ9UGP5 575 aa17.59■□□□□ 0.41
CCDC43-203ENST00000588210 GGA1Q9UJY5 639 aa17.59■□□□□ 0.41
CCDC43-203ENST00000588210 ZC3H4Q9UPT8 1303 aaKnown RBP17.59■□□□□ 0.41
CCDC43-203ENST00000588210 ATP2B4P23634 1241 aa17.59■□□□□ 0.41
CCDC43-203ENST00000588210 YY1P25490 414 aa17.59■□□□□ 0.41
CCDC43-203ENST00000588210 ANAPC15P60006 121 aa17.59■□□□□ 0.41
CCDC43-203ENST00000588210 CHRNDQ07001 517 aa17.59■□□□□ 0.41
CCDC43-203ENST00000588210 LTBP1Q14766 1721 aa17.59■□□□□ 0.41
CCDC43-203ENST00000588210 DUOX1Q9NRD9 1551 aa17.58■□□□□ 0.41
CCDC43-203ENST00000588210 DICER1Q9UPY3 1922 aaKnown RBP17.58■□□□□ 0.41
CCDC43-203ENST00000588210 C6orf229H3BNL8 230 aa17.58■□□□□ 0.4
CCDC43-203ENST00000588210 SRGAP3O43295 1099 aa17.58■□□□□ 0.4
CCDC43-203ENST00000588210 MCCP23508 829 aa17.58■□□□□ 0.4
CCDC43-203ENST00000588210 PTPN12Q05209 780 aaKnown RBP17.58■□□□□ 0.4
CCDC43-203ENST00000588210 CCDC173Q0VFZ6 552 aa17.58■□□□□ 0.4
CCDC43-203ENST00000588210 EYA3Q99504 573 aa17.58■□□□□ 0.4
CCDC43-203ENST00000588210 ESPNB1AK53 854 aa17.57■□□□□ 0.4
CCDC43-203ENST00000588210 KLHDC4Q8TBB5 520 aa17.57■□□□□ 0.4
CCDC43-203ENST00000588210 FBXO3Q9UK99 471 aa17.57■□□□□ 0.4
CCDC43-203ENST00000588210 LEMD3Q9Y2U8 911 aa17.57■□□□□ 0.4
CCDC43-203ENST00000588210 ZDHHC9Q9Y397 364 aa17.57■□□□□ 0.4
CCDC43-203ENST00000588210 PPIP5K2O43314 1243 aa17.57■□□□□ 0.4
CCDC43-203ENST00000588210 UFL1O94874 794 aa17.57■□□□□ 0.4
CCDC43-203ENST00000588210 KIAA2012Q0VF49 1180 aa17.57■□□□□ 0.4
CCDC43-203ENST00000588210 WASHC4Q2M389 1173 aa17.57■□□□□ 0.4
CCDC43-203ENST00000588210 LARGE2Q8N3Y3 721 aa17.57■□□□□ 0.4
CCDC43-203ENST00000588210 JDP2Q8WYK2 163 aa17.57■□□□□ 0.4
CCDC43-203ENST00000588210 TRIM44Q96DX7 344 aaPredicted RBP17.57■□□□□ 0.4
CCDC43-203ENST00000588210 PPP1R9BQ96SB3 815 aa17.57■□□□□ 0.4
CCDC43-203ENST00000588210 PUS3Q9BZE2 481 aaKnown RBP17.57■□□□□ 0.4
CCDC43-203ENST00000588210 RIPOR2Q9Y4F9 1068 aa17.57■□□□□ 0.4
CCDC43-203ENST00000588210 EPB41L2O43491 1005 aaKnown RBP17.56■□□□□ 0.4
CCDC43-203ENST00000588210 CHMLP26374 656 aa17.56■□□□□ 0.4
CCDC43-203ENST00000588210 NASPP49321 788 aaPredicted RBP17.56■□□□□ 0.4
CCDC43-203ENST00000588210 AOC3Q16853 763 aa17.56■□□□□ 0.4
CCDC43-203ENST00000588210 TSHZ3Q63HK5 1081 aa17.56■□□□□ 0.4
CCDC43-203ENST00000588210 COPRSQ9NQ92 184 aa17.56■□□□□ 0.4
CCDC43-203ENST00000588210 MROH5Q6ZUA9 1318 aa17.56■□□□□ 0.4
CCDC43-203ENST00000588210 EYA2O00167 538 aa17.55■□□□□ 0.4
CCDC43-203ENST00000588210 NEK4P51957 841 aa17.55■□□□□ 0.4
CCDC43-203ENST00000588210 CUL4AQ13619 759 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms