RNA–Protein interactions for RNA: ENST00000587127.1

UBE2O-204, Transcript of ubiquitin conjugating enzyme E2 O, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene UBE2O, Length 3,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2O-204ENST00000587127 UTYO14607 1347 aa12.69□□□□□ -0.38
UBE2O-204ENST00000587127 CTAGE5O15320 804 aa12.69□□□□□ -0.38
UBE2O-204ENST00000587127 ATP5JP18859 108 aa12.69□□□□□ -0.38
UBE2O-204ENST00000587127 NDUFA8P51970 172 aa12.69□□□□□ -0.38
UBE2O-204ENST00000587127 RAB11FIP4Q86YS3 637 aa12.69□□□□□ -0.38
UBE2O-204ENST00000587127 IFNKQ9P0W0 207 aa12.69□□□□□ -0.38
UBE2O-204ENST00000587127 U3KPZ7 1027 aaPredicted RBP12.69□□□□□ -0.38
UBE2O-204ENST00000587127 MCMDC2Q4G0Z9 681 aa12.69□□□□□ -0.38
UBE2O-204ENST00000587127 XAGE3Q8WTP9 111 aa12.69□□□□□ -0.38
UBE2O-204ENST00000587127 DDX21Q9NR30 783 aaKnown RBP eCLIP12.69□□□□□ -0.38
UBE2O-204ENST00000587127 MARF1Q9Y4F3 1742 aaKnown RBP12.68□□□□□ -0.38
UBE2O-204ENST00000587127 KDM3BQ7LBC6 1761 aa12.68□□□□□ -0.38
UBE2O-204ENST00000587127 POLR3DP05423 398 aaPredicted RBP12.68□□□□□ -0.38
UBE2O-204ENST00000587127 PTPN12Q05209 780 aaKnown RBP12.68□□□□□ -0.38
UBE2O-204ENST00000587127 GCKRQ14397 625 aa12.68□□□□□ -0.38
UBE2O-204ENST00000587127 COPS6Q7L5N1 327 aa12.68□□□□□ -0.38
UBE2O-204ENST00000587127 PPP1R13BQ96KQ4 1090 aa12.68□□□□□ -0.38
UBE2O-204ENST00000587127 DDX58O95786 925 aaKnown RBP12.68□□□□□ -0.38
UBE2O-204ENST00000587127 PDE4CQ08493 712 aa12.68□□□□□ -0.38
UBE2O-204ENST00000587127 NAA16Q6N069 864 aaPredicted RBP12.68□□□□□ -0.38
UBE2O-204ENST00000587127 FMR1NBQ8N0W7 255 aaPredicted RBP12.68□□□□□ -0.38
UBE2O-204ENST00000587127 HDAC5Q9UQL6 1122 aa12.68□□□□□ -0.38
UBE2O-204ENST00000587127 DHX32Q7L7V1 743 aaKnown RBP12.68□□□□□ -0.38
UBE2O-204ENST00000587127 CHMP4AQ9BY43 222 aa12.68□□□□□ -0.38
UBE2O-204ENST00000587127 TBX22Q9Y458 520 aa12.68□□□□□ -0.38
UBE2O-204ENST00000587127 CLIC4Q9Y696 253 aa12.68□□□□□ -0.38
UBE2O-204ENST00000587127 ATP5J2-PTCD1G3V325 749 aa12.67□□□□□ -0.38
UBE2O-204ENST00000587127 PTCD1O75127 700 aaKnown RBP12.67□□□□□ -0.38
UBE2O-204ENST00000587127 TTLL5Q6EMB2 1281 aa12.67□□□□□ -0.38
UBE2O-204ENST00000587127 RFX5P48382 616 aaPredicted RBP12.67□□□□□ -0.38
UBE2O-204ENST00000587127 GOLGA8FQ08AF8 430 aa12.67□□□□□ -0.38
UBE2O-204ENST00000587127 GOLGA8DPQ0D2H9 430 aa12.67□□□□□ -0.38
UBE2O-204ENST00000587127 UBE3BQ7Z3V4 1068 aa12.67□□□□□ -0.38
UBE2O-204ENST00000587127 FAM53CQ9NYF3 392 aa12.67□□□□□ -0.38
UBE2O-204ENST00000587127 GOLIM4O00461 696 aa12.66□□□□□ -0.38
UBE2O-204ENST00000587127 FDPSP14324 419 aaKnown RBP12.66□□□□□ -0.38
UBE2O-204ENST00000587127 MRPS27Q92552 414 aaKnown RBP12.66□□□□□ -0.38
UBE2O-204ENST00000587127 ZNF396Q96N95 335 aaPredicted RBP12.66□□□□□ -0.38
UBE2O-204ENST00000587127 PHF8Q9UPP1 1060 aa12.66□□□□□ -0.38
UBE2O-204ENST00000587127 LMOD1P29536 600 aaPredicted RBP12.66□□□□□ -0.38
UBE2O-204ENST00000587127 PDIA3P30101 505 aaKnown RBP12.66□□□□□ -0.38
UBE2O-204ENST00000587127 LLPHQ9BRT6 129 aaKnown RBP12.66□□□□□ -0.38
UBE2O-204ENST00000587127 OSBPL5Q9H0X9 879 aaPredicted RBP12.66□□□□□ -0.38
UBE2O-204ENST00000587127 HEG1Q9ULI3 1381 aa12.66□□□□□ -0.38
UBE2O-204ENST00000587127 RGPD2P0DJD1 1756 aa12.66□□□□□ -0.38
UBE2O-204ENST00000587127 CLCN6P51797 869 aa12.65□□□□□ -0.38
UBE2O-204ENST00000587127 NEXNQ0ZGT2 675 aa12.65□□□□□ -0.38
UBE2O-204ENST00000587127 NEUROD6Q96NK8 337 aa12.65□□□□□ -0.38
UBE2O-204ENST00000587127 E7EWF7 191 aa12.65□□□□□ -0.38
UBE2O-204ENST00000587127 ATP1A3P13637 1013 aa12.65□□□□□ -0.38
UBE2O-204ENST00000587127 EXOSC10Q01780 885 aaKnown RBP12.65□□□□□ -0.38
UBE2O-204ENST00000587127 LMOD2Q6P5Q4 547 aa12.65□□□□□ -0.38
UBE2O-204ENST00000587127 COPRSQ9NQ92 184 aa12.65□□□□□ -0.38
UBE2O-204ENST00000587127 TMEM51Q9NW97 253 aa12.65□□□□□ -0.38
UBE2O-204ENST00000587127 KIAA1468Q9P260 1216 aa12.65□□□□□ -0.38
UBE2O-204ENST00000587127 NEDD4P46934 1319 aa12.65□□□□□ -0.38
UBE2O-204ENST00000587127 GSDMDP57764 484 aa12.65□□□□□ -0.38
UBE2O-204ENST00000587127 TIMM10P62072 90 aa12.65□□□□□ -0.38
UBE2O-204ENST00000587127 SF3A1Q15459 793 aaKnown RBP12.65□□□□□ -0.38
UBE2O-204ENST00000587127 HAUS7Q99871 368 aa12.65□□□□□ -0.38
UBE2O-204ENST00000587127 EPC1Q9H2F5 836 aa12.65□□□□□ -0.38
UBE2O-204ENST00000587127 FANCGO15287 622 aa12.64□□□□□ -0.39
UBE2O-204ENST00000587127 ARHGAP29Q52LW3 1261 aa12.64□□□□□ -0.39
UBE2O-204ENST00000587127 PLCD3Q8N3E9 789 aa12.64□□□□□ -0.39
UBE2O-204ENST00000587127 CARMIL3Q8ND23 1372 aa12.64□□□□□ -0.39
UBE2O-204ENST00000587127 SALL1Q9NSC2 1324 aa12.64□□□□□ -0.39
UBE2O-204ENST00000587127 H2AFXP16104 143 aaPredicted RBP12.64□□□□□ -0.39
UBE2O-204ENST00000587127 SFPQP23246 707 aaKnown RBP eCLIP12.64□□□□□ -0.39
UBE2O-204ENST00000587127 HAND2P61296 217 aa12.64□□□□□ -0.39
UBE2O-204ENST00000587127 STK38Q15208 465 aa12.64□□□□□ -0.39
UBE2O-204ENST00000587127 HOMER1Q86YM7 354 aa12.64□□□□□ -0.39
UBE2O-204ENST00000587127 TRERF1Q96PN7 1200 aa12.64□□□□□ -0.39
UBE2O-204ENST00000587127 NAT10Q9H0A0 1025 aaKnown RBP12.64□□□□□ -0.39
UBE2O-204ENST00000587127 L2HGDHQ9H9P8 463 aa12.64□□□□□ -0.39
UBE2O-204ENST00000587127 FHOD1Q9Y613 1164 aa12.64□□□□□ -0.39
UBE2O-204ENST00000587127 KBTBD3Q8NAB2 608 aa12.64□□□□□ -0.39
UBE2O-204ENST00000587127 LINC00301Q8NCQ3 95 aa12.64□□□□□ -0.39
UBE2O-204ENST00000587127 DPF2Q92785 391 aa12.64□□□□□ -0.39
UBE2O-204ENST00000587127 DNAI1Q9UI46 699 aa12.64□□□□□ -0.39
UBE2O-204ENST00000587127 NCAPHQ15003 741 aa12.63□□□□□ -0.39
UBE2O-204ENST00000587127 ZRSR1Q15695 479 aaKnown RBP12.63□□□□□ -0.39
UBE2O-204ENST00000587127 METTL22Q9BUU2 404 aaPredicted RBP12.63□□□□□ -0.39
UBE2O-204ENST00000587127 AXIN2Q9Y2T1 843 aa12.63□□□□□ -0.39
UBE2O-204ENST00000587127 NCAPD2Q15021 1401 aa12.63□□□□□ -0.39
UBE2O-204ENST00000587127 LTN1O94822 1766 aa12.63□□□□□ -0.39
UBE2O-204ENST00000587127 PSME1Q06323 249 aa12.63□□□□□ -0.39
UBE2O-204ENST00000587127 AMOTQ4VCS5 1084 aa12.63□□□□□ -0.39
UBE2O-204ENST00000587127 CCDC93Q567U6 631 aa12.63□□□□□ -0.39
UBE2O-204ENST00000587127 ADALQ6DHV7 355 aa12.63□□□□□ -0.39
UBE2O-204ENST00000587127 TMX1Q9H3N1 280 aa12.63□□□□□ -0.39
UBE2O-204ENST00000587127 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.63□□□□□ -0.391e-6■■■■□ 24.5
UBE2O-204ENST00000587127 HSPD1P10809 573 aaKnown RBP12.63□□□□□ -0.39
UBE2O-204ENST00000587127 FAM177A1Q8N128 213 aaPredicted RBP12.63□□□□□ -0.39
UBE2O-204ENST00000587127 ANKRD24Q8TF21 1146 aa12.63□□□□□ -0.39
UBE2O-204ENST00000587127 SLC3A2P08195 630 aaKnown RBP12.62□□□□□ -0.39
UBE2O-204ENST00000587127 MARCKSP29966 332 aaPredicted RBP12.62□□□□□ -0.39
UBE2O-204ENST00000587127 ESCO1Q5FWF5 840 aa12.62□□□□□ -0.39
UBE2O-204ENST00000587127 SLIT1O75093 1534 aa12.62□□□□□ -0.39
UBE2O-204ENST00000587127 A0A087WZG4 1122 aa12.62□□□□□ -0.39
UBE2O-204ENST00000587127 KIF28PB7ZC32 967 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms