RNA–Protein interactions for RNA: ENST00000586921.1

SMARCA4-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5

Gene SMARCA4, Length 569 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-211ENST00000586921 STAP2Q9UGK3 403 aa16.85■□□□□ 0.29
SMARCA4-211ENST00000586921 ZNF646O15015 1829 aaPredicted RBP16.84■□□□□ 0.29
SMARCA4-211ENST00000586921 ZEB1P37275 1124 aaPredicted RBP16.84■□□□□ 0.29
SMARCA4-211ENST00000586921 PTPN18Q99952 460 aa16.84■□□□□ 0.29
SMARCA4-211ENST00000586921 MTMR10Q9NXD2 777 aa16.84■□□□□ 0.29
SMARCA4-211ENST00000586921 ERBB4Q15303 1308 aa16.84■□□□□ 0.29
SMARCA4-211ENST00000586921 SASH1O94885 1247 aa16.83■□□□□ 0.28
SMARCA4-211ENST00000586921 COL4A1P02462 1669 aa16.83■□□□□ 0.28
SMARCA4-211ENST00000586921 HSP90AB3PQ58FF7 597 aa16.83■□□□□ 0.28
SMARCA4-211ENST00000586921 RSPH6AQ9H0K4 717 aa16.83■□□□□ 0.28
SMARCA4-211ENST00000586921 ANKIB1Q9P2G1 1089 aa16.83■□□□□ 0.28
SMARCA4-211ENST00000586921 GGA1Q9UJY5 639 aa16.83■□□□□ 0.28
SMARCA4-211ENST00000586921 EVI5O60447 810 aa16.82■□□□□ 0.28
SMARCA4-211ENST00000586921 MTFR1Q15390 333 aa16.82■□□□□ 0.28
SMARCA4-211ENST00000586921 MAP3K11Q16584 847 aa16.82■□□□□ 0.28
SMARCA4-211ENST00000586921 PODXL2Q9NZ53 605 aa16.82■□□□□ 0.28
SMARCA4-211ENST00000586921 PPP1R12BO60237 982 aaPredicted RBP16.81■□□□□ 0.28
SMARCA4-211ENST00000586921 GJA8P48165 433 aa16.81■□□□□ 0.28
SMARCA4-211ENST00000586921 THUMPD2Q9BTF0 503 aaKnown RBP16.81■□□□□ 0.28
SMARCA4-211ENST00000586921 TTC28Q96AY4 2481 aa16.81■□□□□ 0.28
SMARCA4-211ENST00000586921 COL1A1P02452 1464 aaPredicted RBP16.8■□□□□ 0.28
SMARCA4-211ENST00000586921 TESPA1A2RU30 521 aaPredicted RBP16.8■□□□□ 0.28
SMARCA4-211ENST00000586921 HTATSF1O43719 755 aaKnown RBP16.8■□□□□ 0.28
SMARCA4-211ENST00000586921 FARP2O94887 1054 aaPredicted RBP16.8■□□□□ 0.28
SMARCA4-211ENST00000586921 COL9A1P20849 921 aa16.8■□□□□ 0.28
SMARCA4-211ENST00000586921 GJA5P36382 358 aa16.8■□□□□ 0.28
SMARCA4-211ENST00000586921 EIF4A1P60842 406 aaKnown RBP16.8■□□□□ 0.28
SMARCA4-211ENST00000586921 KIF22Q14807 665 aa16.8■□□□□ 0.28
SMARCA4-211ENST00000586921 TAF1CQ15572 869 aaPredicted RBP16.8■□□□□ 0.28
SMARCA4-211ENST00000586921 PNISRQ8TF01 805 aaKnown RBP16.8■□□□□ 0.28
SMARCA4-211ENST00000586921 ZFYVE28Q9HCC9 887 aa16.8■□□□□ 0.28
SMARCA4-211ENST00000586921 UNCXA6NJT0 531 aa16.79■□□□□ 0.28
SMARCA4-211ENST00000586921 RPS8P62241 208 aaKnown RBP16.79■□□□□ 0.28
SMARCA4-211ENST00000586921 SF3B3Q15393 1217 aaKnown RBP16.79■□□□□ 0.28
SMARCA4-211ENST00000586921 ZNF428Q96B54 188 aa16.79■□□□□ 0.28
SMARCA4-211ENST00000586921 SSC5DA1L4H1 1573 aa16.78■□□□□ 0.28
SMARCA4-211ENST00000586921 GJB1P08034 283 aa16.78■□□□□ 0.28
SMARCA4-211ENST00000586921 LRP10Q7Z4F1 713 aa16.78■□□□□ 0.28
SMARCA4-211ENST00000586921 PODNQ7Z5L7 613 aa16.78■□□□□ 0.28
SMARCA4-211ENST00000586921 ARHGAP39Q9C0H5 1083 aa16.78■□□□□ 0.28
SMARCA4-211ENST00000586921 DEFB129Q9H1M3 183 aa16.78■□□□□ 0.28
SMARCA4-211ENST00000586921 ZSWIM8A7E2V4 1837 aa16.77■□□□□ 0.28
SMARCA4-211ENST00000586921 GNRH1P01148 92 aa16.77■□□□□ 0.28
SMARCA4-211ENST00000586921 PRMT2P55345 433 aa16.77■□□□□ 0.28
SMARCA4-211ENST00000586921 CC2D1BQ5T0F9 858 aaKnown RBP16.77■□□□□ 0.28
SMARCA4-211ENST00000586921 MXD3Q9BW11 206 aa16.77■□□□□ 0.28
SMARCA4-211ENST00000586921 MYO3BQ8WXR4 1341 aa16.76■□□□□ 0.27
SMARCA4-211ENST00000586921 CCL5P13501 91 aa16.76■□□□□ 0.27
SMARCA4-211ENST00000586921 BMP8BP34820 402 aa16.76■□□□□ 0.27
SMARCA4-211ENST00000586921 IREB2P48200 963 aaKnown RBP16.76■□□□□ 0.27
SMARCA4-211ENST00000586921 LACTBP83111 547 aaPredicted RBP16.76■□□□□ 0.27
SMARCA4-211ENST00000586921 LRIT3Q3SXY7 679 aa16.76■□□□□ 0.27
SMARCA4-211ENST00000586921 FBXW7Q969H0 707 aa16.76■□□□□ 0.27
SMARCA4-211ENST00000586921 RPTORQ8N122 1335 aa16.75■□□□□ 0.27
SMARCA4-211ENST00000586921 PDIA6Q15084 440 aa16.75■□□□□ 0.27
SMARCA4-211ENST00000586921 PROSER3Q2NL68 480 aa16.75■□□□□ 0.27
SMARCA4-211ENST00000586921 DACT2Q5SW24 774 aa16.75■□□□□ 0.27
SMARCA4-211ENST00000586921 GDF15Q99988 308 aa16.75■□□□□ 0.27
SMARCA4-211ENST00000586921 RNF208Q9H0X6 261 aa16.75■□□□□ 0.27
SMARCA4-211ENST00000586921 EYSQ5T1H1 3165 aa16.74■□□□□ 0.27
SMARCA4-211ENST00000586921 WDHD1O75717 1129 aaPredicted RBP16.74■□□□□ 0.27
SMARCA4-211ENST00000586921 ANXA1P04083 346 aa16.74■□□□□ 0.27
SMARCA4-211ENST00000586921 MMP14P50281 582 aa16.74■□□□□ 0.27
SMARCA4-211ENST00000586921 AIMP1Q12904 312 aaKnown RBP16.74■□□□□ 0.27
SMARCA4-211ENST00000586921 ANKRD13AQ8IZ07 590 aa16.74■□□□□ 0.27
SMARCA4-211ENST00000586921 BRI3BPQ8WY22 251 aa16.74■□□□□ 0.27
SMARCA4-211ENST00000586921 OPTNQ96CV9 577 aa16.74■□□□□ 0.27
SMARCA4-211ENST00000586921 FAM89AQ96GI7 184 aa16.74■□□□□ 0.27
SMARCA4-211ENST00000586921 MS4A4AQ96JQ5 239 aa16.74■□□□□ 0.27
SMARCA4-211ENST00000586921 GRK4P32298 578 aa16.73■□□□□ 0.27
SMARCA4-211ENST00000586921 BCAMP50895 628 aa16.73■□□□□ 0.27
SMARCA4-211ENST00000586921 SUPT20HL1Q3ZLR7 823 aa16.73■□□□□ 0.27
SMARCA4-211ENST00000586921 COPS6Q7L5N1 327 aa16.73■□□□□ 0.27
SMARCA4-211ENST00000586921 U2AF1L4Q8WU68 220 aaKnown RBP16.73■□□□□ 0.27
SMARCA4-211ENST00000586921 PPP2R3BQ9Y5P8 575 aa16.73■□□□□ 0.27
SMARCA4-211ENST00000586921 CCL15-CCL14A0A0B4J2E2 113 aa16.72■□□□□ 0.27
SMARCA4-211ENST00000586921 EIF2S2P20042 333 aaKnown RBP16.72■□□□□ 0.27
SMARCA4-211ENST00000586921 CCL15Q16663 113 aa16.72■□□□□ 0.27
SMARCA4-211ENST00000586921 FAM43AQ8N2R8 423 aa16.72■□□□□ 0.27
SMARCA4-211ENST00000586921 RAET1EQ8TD07 263 aa16.72■□□□□ 0.27
SMARCA4-211ENST00000586921 ELP3Q9H9T3 547 aa16.72■□□□□ 0.27
SMARCA4-211ENST00000586921 BIN2Q9UBW5 565 aaPredicted RBP16.72■□□□□ 0.27
SMARCA4-211ENST00000586921 XDHP47989 1333 aa16.71■□□□□ 0.27
SMARCA4-211ENST00000586921 TLR2O60603 784 aa16.71■□□□□ 0.27
SMARCA4-211ENST00000586921 PLA2G5P39877 138 aa16.71■□□□□ 0.27
SMARCA4-211ENST00000586921 TRIM26Q12899 539 aaPredicted RBP16.71■□□□□ 0.27
SMARCA4-211ENST00000586921 STRIP1Q5VSL9 837 aa16.71■□□□□ 0.27
SMARCA4-211ENST00000586921 XAGE3Q8WTP9 111 aa16.71■□□□□ 0.27
SMARCA4-211ENST00000586921 ZBED3Q96IU2 234 aaPredicted RBP16.71■□□□□ 0.27
SMARCA4-211ENST00000586921 PCGF6Q9BYE7 350 aa16.71■□□□□ 0.27
SMARCA4-211ENST00000586921 RIPOR2Q9Y4F9 1068 aa16.71■□□□□ 0.27
SMARCA4-211ENST00000586921 PRUNE2Q8WUY3 3088 aa16.71■□□□□ 0.27
SMARCA4-211ENST00000586921 OTOFQ9HC10 1997 aa16.7■□□□□ 0.26
SMARCA4-211ENST00000586921 ECM2O94769 699 aaPredicted RBP16.7■□□□□ 0.26
SMARCA4-211ENST00000586921 U2AF1L5P0DN76 240 aaPredicted RBP16.7■□□□□ 0.26
SMARCA4-211ENST00000586921 HSPA5P11021 654 aaKnown RBP16.7■□□□□ 0.26
SMARCA4-211ENST00000586921 GTF2A2P52657 109 aa16.7■□□□□ 0.26
SMARCA4-211ENST00000586921 UBXN2AP68543 259 aa16.7■□□□□ 0.26
SMARCA4-211ENST00000586921 EIF4G2P78344 907 aaKnown RBP eCLIP16.7■□□□□ 0.26
SMARCA4-211ENST00000586921 U2AF1Q01081 240 aaKnown RBP eCLIP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms