RNA–Protein interactions for RNA: ENST00000585942.5

CACTIN-204, Transcript of cactin, spliceosome C complex subunit, humanhuman

TSL 1 (best)

Gene CACTIN, Length 2,810 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-204ENST00000585942 ERCC4Q92889 916 aaPredicted RBP21.67■■□□□ 1.06
CACTIN-204ENST00000585942 ZBTB3Q9H5J0 574 aa21.67■■□□□ 1.06
CACTIN-204ENST00000585942 SH3TC1Q8TE82 1336 aa21.67■■□□□ 1.06
CACTIN-204ENST00000585942 RIOK3O14730 519 aaKnown RBP21.67■■□□□ 1.06
CACTIN-204ENST00000585942 PLA2G4DQ86XP0 818 aa21.67■■□□□ 1.06
CACTIN-204ENST00000585942 USP28Q96RU2 1077 aa21.67■■□□□ 1.06
CACTIN-204ENST00000585942 PUS3Q9BZE2 481 aaKnown RBP21.67■■□□□ 1.06
CACTIN-204ENST00000585942 GOLPH3LQ9H4A5 285 aa21.67■■□□□ 1.06
CACTIN-204ENST00000585942 GPHNQ9NQX3 736 aaPredicted RBP21.67■■□□□ 1.06
CACTIN-204ENST00000585942 E7EWF7 191 aa21.66■■□□□ 1.06
CACTIN-204ENST00000585942 EXOSC10Q01780 885 aaKnown RBP21.66■■□□□ 1.06
CACTIN-204ENST00000585942 ZNF771Q7L3S4 317 aaPredicted RBP21.66■■□□□ 1.06
CACTIN-204ENST00000585942 TAF3Q5VWG9 929 aa21.66■■□□□ 1.06
CACTIN-204ENST00000585942 C11orf57Q6ZUT1 292 aaPredicted RBP21.66■■□□□ 1.06
CACTIN-204ENST00000585942 CCAR1Q8IX12 1150 aaKnown RBP21.66■■□□□ 1.06
CACTIN-204ENST00000585942 TDRD7Q8NHU6 1098 aaKnown RBP21.66■■□□□ 1.06
CACTIN-204ENST00000585942 LMTK3Q96Q04 1460 aa21.66■■□□□ 1.06
CACTIN-204ENST00000585942 ARFGEF2Q9Y6D5 1785 aa21.65■■□□□ 1.06
CACTIN-204ENST00000585942 CCDC144BQ3MJ40 725 aa21.65■■□□□ 1.06
CACTIN-204ENST00000585942 ZMYM1Q5SVZ6 1142 aa21.65■■□□□ 1.06
CACTIN-204ENST00000585942 CCDC144CPQ8IYA2 1237 aa21.65■■□□□ 1.06
CACTIN-204ENST00000585942 ZSCAN25Q6NSZ9 544 aa21.64■■□□□ 1.05
CACTIN-204ENST00000585942 HELLSQ9NRZ9 838 aa21.64■■□□□ 1.05
CACTIN-204ENST00000585942 MAST3O60307 1309 aa21.64■■□□□ 1.05
CACTIN-204ENST00000585942 RFX7Q2KHR2 1363 aa21.64■■□□□ 1.05
CACTIN-204ENST00000585942 A0A1B0GUL7 405 aa21.64■■□□□ 1.05
CACTIN-204ENST00000585942 HMGB1P09429 215 aaKnown RBP21.64■■□□□ 1.05
CACTIN-204ENST00000585942 IFIT1P09914 478 aaKnown RBP21.64■■□□□ 1.05
CACTIN-204ENST00000585942 FBXW7Q969H0 707 aa21.64■■□□□ 1.05
CACTIN-204ENST00000585942 LLPHQ9BRT6 129 aaKnown RBP21.64■■□□□ 1.05
CACTIN-204ENST00000585942 CWC25Q9NXE8 425 aaPredicted RBP21.64■■□□□ 1.05
CACTIN-204ENST00000585942 RCOR1Q9UKL0 485 aa21.64■■□□□ 1.05
CACTIN-204ENST00000585942 PDIA3P30101 505 aaKnown RBP21.63■■□□□ 1.05
CACTIN-204ENST00000585942 FKBP4Q02790 459 aaKnown RBP eCLIP21.63■■□□□ 1.05
CACTIN-204ENST00000585942 C16orf45Q96MC5 204 aaPredicted RBP21.63■■□□□ 1.05
CACTIN-204ENST00000585942 CCDC85AQ96PX6 553 aaPredicted RBP21.63■■□□□ 1.05
CACTIN-204ENST00000585942 DSCC1Q9BVC3 393 aa21.63■■□□□ 1.05
CACTIN-204ENST00000585942 CLIP2Q9UDT6 1046 aa21.63■■□□□ 1.05
CACTIN-204ENST00000585942 M0R2C6 588 aa21.63■■□□□ 1.05
CACTIN-204ENST00000585942 SNW1Q13573 536 aaKnown RBP21.63■■□□□ 1.05
CACTIN-204ENST00000585942 OTUD7BQ6GQQ9 843 aa21.63■■□□□ 1.05
CACTIN-204ENST00000585942 ILDR1Q86SU0 546 aaPredicted RBP21.63■■□□□ 1.05
CACTIN-204ENST00000585942 CACTINQ8WUQ7 758 aaKnown RBP21.63■■□□□ 1.05
CACTIN-204ENST00000585942 PALLDQ8WX93 1383 aa21.62■■□□□ 1.05
CACTIN-204ENST00000585942 LAMA4Q16363 1823 aa21.62■■□□□ 1.05
CACTIN-204ENST00000585942 HAND2P61296 217 aa21.62■■□□□ 1.05
CACTIN-204ENST00000585942 IQCB1Q15051 598 aa21.62■■□□□ 1.05
CACTIN-204ENST00000585942 ARID5BQ14865 1188 aa21.62■■□□□ 1.05
CACTIN-204ENST00000585942 NAA16Q6N069 864 aaPredicted RBP21.62■■□□□ 1.05
CACTIN-204ENST00000585942 OSBP2Q969R2 916 aa21.62■■□□□ 1.05
CACTIN-204ENST00000585942 ATF3P18847 181 aa21.61■■□□□ 1.05
CACTIN-204ENST00000585942 IL15P40933 162 aaPredicted RBP21.61■■□□□ 1.05
CACTIN-204ENST00000585942 EYA2O00167 538 aa21.61■■□□□ 1.05
CACTIN-204ENST00000585942 HSP90AB3PQ58FF7 597 aa21.61■■□□□ 1.05
CACTIN-204ENST00000585942 IPO4Q8TEX9 1081 aaKnown RBP21.61■■□□□ 1.05
CACTIN-204ENST00000585942 AGXT2Q9BYV1 514 aa21.61■■□□□ 1.05
CACTIN-204ENST00000585942 RNF113AO15541 343 aaKnown RBP21.61■■□□□ 1.05
CACTIN-204ENST00000585942 ME1P48163 572 aa21.61■■□□□ 1.05
CACTIN-204ENST00000585942 CHAF1AQ13111 956 aaPredicted RBP21.61■■□□□ 1.05
CACTIN-204ENST00000585942 RAB11FIP4Q86YS3 637 aa21.61■■□□□ 1.05
CACTIN-204ENST00000585942 ANKRD7Q92527 254 aa21.61■■□□□ 1.05
CACTIN-204ENST00000585942 ZNF142P52746 1687 aaPredicted RBP21.6■■□□□ 1.05
CACTIN-204ENST00000585942 FDPSP14324 419 aaKnown RBP21.6■■□□□ 1.05
CACTIN-204ENST00000585942 ALS2Q96Q42 1657 aa21.6■■□□□ 1.05
CACTIN-204ENST00000585942 ZNF330Q9Y3S2 320 aaPredicted RBP21.6■■□□□ 1.05
CACTIN-204ENST00000585942 SALL1Q9NSC2 1324 aa21.59■■□□□ 1.05
CACTIN-204ENST00000585942 ADORA1P30542 326 aa21.59■■□□□ 1.05
CACTIN-204ENST00000585942 GJB4Q9NTQ9 266 aa21.59■■□□□ 1.05
CACTIN-204ENST00000585942 GOLGA6L19H0YKK7 550 aa21.59■■□□□ 1.05
CACTIN-204ENST00000585942 FSIP1Q8NA03 581 aa21.58■■□□□ 1.04
CACTIN-204ENST00000585942 ENGASEQ8NFI3 743 aa21.58■■□□□ 1.04
CACTIN-204ENST00000585942 FOXP2O15409 715 aa21.57■■□□□ 1.04
CACTIN-204ENST00000585942 CDK11BP21127 795 aaKnown RBP21.57■■□□□ 1.04
CACTIN-204ENST00000585942 CCDC73Q6ZRK6 1079 aa21.57■■□□□ 1.04
CACTIN-204ENST00000585942 POLR3DP05423 398 aaPredicted RBP21.57■■□□□ 1.04
CACTIN-204ENST00000585942 SCARF1Q14162 830 aa21.57■■□□□ 1.04
CACTIN-204ENST00000585942 WASHC4Q2M389 1173 aa21.57■■□□□ 1.04
CACTIN-204ENST00000585942 PI16Q6UXB8 463 aa21.57■■□□□ 1.04
CACTIN-204ENST00000585942 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.57■■□□□ 1.04
CACTIN-204ENST00000585942 GPR108Q9NPR9 543 aa21.57■■□□□ 1.04
CACTIN-204ENST00000585942 COL18A1P39060 1754 aa21.57■■□□□ 1.04
CACTIN-204ENST00000585942 CARMIL3Q8ND23 1372 aa21.57■■□□□ 1.04
CACTIN-204ENST00000585942 KINO60870 393 aaKnown RBP21.56■■□□□ 1.04
CACTIN-204ENST00000585942 A0A1B0GVL5 298 aa21.56■■□□□ 1.04
CACTIN-204ENST00000585942 STX1AQ16623 288 aa21.56■■□□□ 1.04
CACTIN-204ENST00000585942 ZNF274Q96GC6 653 aaPredicted RBP21.56■■□□□ 1.04
CACTIN-204ENST00000585942 FEZ1Q99689 392 aa21.56■■□□□ 1.04
CACTIN-204ENST00000585942 PCDHA7Q9UN72 937 aa21.56■■□□□ 1.04
CACTIN-204ENST00000585942 MST1RQ04912 1400 aa21.55■■□□□ 1.04
CACTIN-204ENST00000585942 FAM160A1Q05DH4 1040 aa21.55■■□□□ 1.04
CACTIN-204ENST00000585942 DHX40Q8IX18 779 aaKnown RBP21.55■■□□□ 1.04
CACTIN-204ENST00000585942 ZNF396Q96N95 335 aaPredicted RBP21.55■■□□□ 1.04
CACTIN-204ENST00000585942 CEP126Q9P2H0 1117 aa21.55■■□□□ 1.04
CACTIN-204ENST00000585942 TAOK2Q9UL54 1235 aa21.55■■□□□ 1.04
CACTIN-204ENST00000585942 GLI3P10071 1580 aa21.55■■□□□ 1.04
CACTIN-204ENST00000585942 BECN2A8MW95 431 aa21.55■■□□□ 1.04
CACTIN-204ENST00000585942 TNNT1P13805 278 aa21.55■■□□□ 1.04
CACTIN-204ENST00000585942 GORABQ5T7V8 394 aa21.55■■□□□ 1.04
CACTIN-204ENST00000585942 CCDC191Q8NCU4 936 aa21.55■■□□□ 1.04
CACTIN-204ENST00000585942 OGFRQ9NZT2 677 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms