RNA–Protein interactions for RNA: ENST00000581868.1

RNF43-205, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,610 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-205ENST00000581868 CTAGE5O15320 804 aa16.05■□□□□ 0.16
RNF43-205ENST00000581868 U2AF2P26368 475 aaKnown RBP eCLIP16.05■□□□□ 0.16
RNF43-205ENST00000581868 FOXO4P98177 505 aa16.05■□□□□ 0.16
RNF43-205ENST00000581868 CHRNA2Q15822 529 aa16.05■□□□□ 0.16
RNF43-205ENST00000581868 TTLL5Q6EMB2 1281 aa16.05■□□□□ 0.16
RNF43-205ENST00000581868 FILIP1Q7Z7B0 1213 aa16.05■□□□□ 0.16
RNF43-205ENST00000581868 ANKRD7Q92527 254 aa16.05■□□□□ 0.16
RNF43-205ENST00000581868 ZNF396Q96N95 335 aaPredicted RBP16.05■□□□□ 0.16
RNF43-205ENST00000581868 CABLES1Q8TDN4 633 aa16.04■□□□□ 0.16
RNF43-205ENST00000581868 DCAF5Q96JK2 942 aa16.04■□□□□ 0.16
RNF43-205ENST00000581868 DSCC1Q9BVC3 393 aa16.04■□□□□ 0.16
RNF43-205ENST00000581868 SMTNL1A8MU46 457 aa16.04■□□□□ 0.16
RNF43-205ENST00000581868 IFIT1P09914 478 aaKnown RBP16.04■□□□□ 0.16
RNF43-205ENST00000581868 PDIA3P30101 505 aaKnown RBP16.04■□□□□ 0.16
RNF43-205ENST00000581868 LRRC24Q50LG9 513 aa16.04■□□□□ 0.16
RNF43-205ENST00000581868 ZMYM1Q5SVZ6 1142 aa16.04■□□□□ 0.16
RNF43-205ENST00000581868 PROSER2Q86WR7 435 aaPredicted RBP16.04■□□□□ 0.16
RNF43-205ENST00000581868 LRRC8AQ8IWT6 810 aa16.04■□□□□ 0.16
RNF43-205ENST00000581868 GPHNQ9NQX3 736 aaPredicted RBP16.04■□□□□ 0.16
RNF43-205ENST00000581868 MEGF6O75095 1541 aa16.04■□□□□ 0.16
RNF43-205ENST00000581868 NAA30Q147X3 362 aaPredicted RBP16.03■□□□□ 0.16
RNF43-205ENST00000581868 OTUD7BQ6GQQ9 843 aa16.03■□□□□ 0.16
RNF43-205ENST00000581868 CDC25BP30305 580 aa16.03■□□□□ 0.16
RNF43-205ENST00000581868 FAM160A1Q05DH4 1040 aa16.03■□□□□ 0.16
RNF43-205ENST00000581868 TTLL7Q6ZT98 887 aa16.03■□□□□ 0.16
RNF43-205ENST00000581868 ILDR1Q86SU0 546 aaPredicted RBP16.03■□□□□ 0.16
RNF43-205ENST00000581868 MAST3O60307 1309 aa16.03■□□□□ 0.16
RNF43-205ENST00000581868 USP27XA6NNY8 438 aa16.02■□□□□ 0.16
RNF43-205ENST00000581868 NCBP1Q09161 790 aaKnown RBP16.02■□□□□ 0.16
RNF43-205ENST00000581868 SARM1Q6SZW1 724 aa16.02■□□□□ 0.16
RNF43-205ENST00000581868 CCDC112Q8NEF3 446 aa16.02■□□□□ 0.16
RNF43-205ENST00000581868 ENGASEQ8NFI3 743 aa16.02■□□□□ 0.16
RNF43-205ENST00000581868 PALLDQ8WX93 1383 aa16.02■□□□□ 0.16
RNF43-205ENST00000581868 ADAMTS7Q9UKP4 1686 aa16.02■□□□□ 0.16
RNF43-205ENST00000581868 A0A1B0GVL5 298 aa16.02■□□□□ 0.15
RNF43-205ENST00000581868 H7C1W4 665 aa16.02■□□□□ 0.15
RNF43-205ENST00000581868 HAND2P61296 217 aa16.02■□□□□ 0.15
RNF43-205ENST00000581868 FKBP4Q02790 459 aaKnown RBP eCLIP16.02■□□□□ 0.15
RNF43-205ENST00000581868 DHX40Q8IX18 779 aaKnown RBP16.02■□□□□ 0.15
RNF43-205ENST00000581868 AOPEPQ8N6M6 819 aa16.02■□□□□ 0.15
RNF43-205ENST00000581868 MRFAP1L1Q96HT8 127 aa16.02■□□□□ 0.15
RNF43-205ENST00000581868 SDF4Q9BRK5 362 aa16.02■□□□□ 0.15
RNF43-205ENST00000581868 ANO10Q9NW15 660 aa16.02■□□□□ 0.15
RNF43-205ENST00000581868 NBPF26B4DH59 902 aa16.01■□□□□ 0.15
RNF43-205ENST00000581868 M0R2C6 588 aa16.01■□□□□ 0.15
RNF43-205ENST00000581868 RNF113AO15541 343 aaKnown RBP16.01■□□□□ 0.15
RNF43-205ENST00000581868 SKILP12757 684 aa16.01■□□□□ 0.15
RNF43-205ENST00000581868 NBPF14Q5TI25 921 aa16.01■□□□□ 0.15
RNF43-205ENST00000581868 CEP135Q66GS9 1140 aa16.01■□□□□ 0.15
RNF43-205ENST00000581868 NBPF10Q6P3W6 841 aaKnown RBP16.01■□□□□ 0.15
RNF43-205ENST00000581868 NBPF15Q8N660 670 aa16.01■□□□□ 0.15
RNF43-205ENST00000581868 PCDHA7Q9UN72 937 aa16.01■□□□□ 0.15
RNF43-205ENST00000581868 CAMTA1Q9Y6Y1 1673 aa16.01■□□□□ 0.15
RNF43-205ENST00000581868 AFDNP55196 1824 aaKnown RBP16.01■□□□□ 0.15
RNF43-205ENST00000581868 ZSCAN20P17040 1043 aaPredicted RBP16.01■□□□□ 0.15
RNF43-205ENST00000581868 IL15P40933 162 aaPredicted RBP16.01■□□□□ 0.15
RNF43-205ENST00000581868 RAB11FIP4Q86YS3 637 aa16.01■□□□□ 0.15
RNF43-205ENST00000581868 AGXT2Q9BYV1 514 aa16.01■□□□□ 0.15
RNF43-205ENST00000581868 PUS3Q9BZE2 481 aaKnown RBP16.01■□□□□ 0.15
RNF43-205ENST00000581868 ZBTB3Q9H5J0 574 aa16.01■□□□□ 0.15
RNF43-205ENST00000581868 CWC25Q9NXE8 425 aaPredicted RBP16.01■□□□□ 0.15
RNF43-205ENST00000581868 A0A1B0GUL7 405 aa16■□□□□ 0.15
RNF43-205ENST00000581868 POLR3DP05423 398 aaPredicted RBP16■□□□□ 0.15
RNF43-205ENST00000581868 ZNF274Q96GC6 653 aaPredicted RBP16■□□□□ 0.15
RNF43-205ENST00000581868 TRMT1Q9NXH9 659 aaKnown RBP16■□□□□ 0.15
RNF43-205ENST00000581868 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16■□□□□ 0.152e-11■■■□□ 15.2
RNF43-205ENST00000581868 PAXBP1Q9Y5B6 917 aa16■□□□□ 0.15
RNF43-205ENST00000581868 SCN11AQ9UI33 1791 aa16■□□□□ 0.15
RNF43-205ENST00000581868 SALL1Q9NSC2 1324 aa16■□□□□ 0.15
RNF43-205ENST00000581868 CARMIL3Q8ND23 1372 aa16■□□□□ 0.15
RNF43-205ENST00000581868 CCDC69A6NI79 296 aa16■□□□□ 0.15
RNF43-205ENST00000581868 FDPSP14324 419 aaKnown RBP16■□□□□ 0.15
RNF43-205ENST00000581868 SF3A1Q15459 793 aaKnown RBP16■□□□□ 0.15
RNF43-205ENST00000581868 CEP57L1Q8IYX8 460 aa16■□□□□ 0.15
RNF43-205ENST00000581868 ZHX1Q9UKY1 873 aaPredicted RBP16■□□□□ 0.15
RNF43-205ENST00000581868 TAOK2Q9UL54 1235 aa16■□□□□ 0.15
RNF43-205ENST00000581868 EYA2O00167 538 aa15.99■□□□□ 0.15
RNF43-205ENST00000581868 WASHC4Q2M389 1173 aa15.99■□□□□ 0.15
RNF43-205ENST00000581868 MRPS27Q92552 414 aaKnown RBP15.99■□□□□ 0.15
RNF43-205ENST00000581868 OSBP2Q969R2 916 aa15.99■□□□□ 0.15
RNF43-205ENST00000581868 A1BGP04217 495 aa15.99■□□□□ 0.15
RNF43-205ENST00000581868 HSP90AB3PQ58FF7 597 aa15.99■□□□□ 0.15
RNF43-205ENST00000581868 ATL3Q6DD88 541 aa15.99■□□□□ 0.15
RNF43-205ENST00000581868 CLIC4Q9Y696 253 aa15.99■□□□□ 0.15
RNF43-205ENST00000581868 NDUFA8P51970 172 aa15.98■□□□□ 0.15
RNF43-205ENST00000581868 STK38Q15208 465 aa15.98■□□□□ 0.15
RNF43-205ENST00000581868 GORABQ5T7V8 394 aa15.98■□□□□ 0.15
RNF43-205ENST00000581868 GJB4Q9NTQ9 266 aa15.98■□□□□ 0.15
RNF43-205ENST00000581868 DMTNQ08495 405 aa15.98■□□□□ 0.15
RNF43-205ENST00000581868 PTPN14Q15678 1187 aa15.98■□□□□ 0.15
RNF43-205ENST00000581868 FMR1NBQ8N0W7 255 aaPredicted RBP15.98■□□□□ 0.15
RNF43-205ENST00000581868 CCDC85AQ96PX6 553 aaPredicted RBP15.98■□□□□ 0.15
RNF43-205ENST00000581868 GPR108Q9NPR9 543 aa15.98■□□□□ 0.15
RNF43-205ENST00000581868 LMTK3Q96Q04 1460 aa15.98■□□□□ 0.15
RNF43-205ENST00000581868 LAMA4Q16363 1823 aa15.98■□□□□ 0.15
RNF43-205ENST00000581868 NEMFO60524 1076 aa15.98■□□□□ 0.15
RNF43-205ENST00000581868 ZRSR1Q15695 479 aaKnown RBP15.98■□□□□ 0.15
RNF43-205ENST00000581868 C8orf76Q96K31 380 aa15.98■□□□□ 0.15
RNF43-205ENST00000581868 NAT10Q9H0A0 1025 aaKnown RBP15.98■□□□□ 0.15
RNF43-205ENST00000581868 BIN1O00499 593 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms