RNA–Protein interactions for RNA: ENST00000580972.1

RNU4ATAC-201, Transcript of RNA, U4atac small nuclear (U12-dependent splicing), humanhuman

BASIC

Gene RNU4ATAC, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC-201ENST00000580972 TAF6LQ9Y6J9 622 aa7.47□□□□□ -1.21
RNU4ATAC-201ENST00000580972 CACNA1FO60840 1977 aa7.47□□□□□ -1.21
RNU4ATAC-201ENST00000580972 TAF1LQ8IZX4 1826 aa7.47□□□□□ -1.21
RNU4ATAC-201ENST00000580972 UBR3Q6ZT12 1888 aa7.47□□□□□ -1.21
RNU4ATAC-201ENST00000580972 EP400Q96L91 3159 aa7.47□□□□□ -1.21
RNU4ATAC-201ENST00000580972 DDX60Q8IY21 1712 aaKnown RBP7.47□□□□□ -1.21
RNU4ATAC-201ENST00000580972 ANKRD36CQ5JPF3 1778 aa7.46□□□□□ -1.21
RNU4ATAC-201ENST00000580972 A0A0G2JLW4 131 aa7.46□□□□□ -1.22
RNU4ATAC-201ENST00000580972 PPEF1O14829 653 aaPredicted RBP7.46□□□□□ -1.22
RNU4ATAC-201ENST00000580972 UFL1O94874 794 aa7.46□□□□□ -1.22
RNU4ATAC-201ENST00000580972 SRGNP10124 158 aa7.46□□□□□ -1.22
RNU4ATAC-201ENST00000580972 ARID4AP29374 1257 aaPredicted RBP7.46□□□□□ -1.22
RNU4ATAC-201ENST00000580972 KCNJ4P48050 445 aa7.46□□□□□ -1.22
RNU4ATAC-201ENST00000580972 COL9A3Q14050 684 aaPredicted RBP7.46□□□□□ -1.22
RNU4ATAC-201ENST00000580972 KBTBD3Q8NAB2 608 aa7.46□□□□□ -1.22
RNU4ATAC-201ENST00000580972 ZNF622Q969S3 477 aaKnown RBP eCLIP7.46□□□□□ -1.22
RNU4ATAC-201ENST00000580972 FAM84BQ96KN1 310 aaPredicted RBP7.46□□□□□ -1.22
RNU4ATAC-201ENST00000580972 ZNF804BA4D1E1 1349 aa7.46□□□□□ -1.22
RNU4ATAC-201ENST00000580972 NUP98P52948 1817 aa7.45□□□□□ -1.22
RNU4ATAC-201ENST00000580972 CD2BP2O95400 341 aaKnown RBP7.45□□□□□ -1.22
RNU4ATAC-201ENST00000580972 NPR1P16066 1061 aa7.45□□□□□ -1.22
RNU4ATAC-201ENST00000580972 ANP32AP39687 249 aaKnown RBP7.45□□□□□ -1.22
RNU4ATAC-201ENST00000580972 CHAF1AQ13111 956 aaPredicted RBP7.45□□□□□ -1.22
RNU4ATAC-201ENST00000580972 UBE4AQ14139 1066 aa7.45□□□□□ -1.22
RNU4ATAC-201ENST00000580972 GRIK5Q16478 980 aa7.45□□□□□ -1.22
RNU4ATAC-201ENST00000580972 VPS53Q5VIR6 699 aa7.45□□□□□ -1.22
RNU4ATAC-201ENST00000580972 CASC1Q6TDU7 716 aa7.45□□□□□ -1.22
RNU4ATAC-201ENST00000580972 FBXO33Q7Z6M2 555 aa7.45□□□□□ -1.22
RNU4ATAC-201ENST00000580972 SPATA5Q8NB90 893 aa7.45□□□□□ -1.22
RNU4ATAC-201ENST00000580972 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.45□□□□□ -1.22
RNU4ATAC-201ENST00000580972 OSBP2Q969R2 916 aa7.45□□□□□ -1.22
RNU4ATAC-201ENST00000580972 CRAMP1Q96RY5 1269 aa7.45□□□□□ -1.22
RNU4ATAC-201ENST00000580972 UPF2Q9HAU5 1272 aaKnown RBP7.45□□□□□ -1.22
RNU4ATAC-201ENST00000580972 ANKIB1Q9P2G1 1089 aa7.45□□□□□ -1.22
RNU4ATAC-201ENST00000580972 POLLQ9UGP5 575 aa7.45□□□□□ -1.22
RNU4ATAC-201ENST00000580972 MAST3O60307 1309 aa7.45□□□□□ -1.22
RNU4ATAC-201ENST00000580972 MED23Q9ULK4 1368 aa7.45□□□□□ -1.22
RNU4ATAC-201ENST00000580972 FOXP2O15409 715 aa7.44□□□□□ -1.22
RNU4ATAC-201ENST00000580972 RNF113AO15541 343 aaKnown RBP7.44□□□□□ -1.22
RNU4ATAC-201ENST00000580972 IDH1O75874 414 aaKnown RBP7.44□□□□□ -1.22
RNU4ATAC-201ENST00000580972 UQCRFS1P1P0C7P4 283 aa7.44□□□□□ -1.22
RNU4ATAC-201ENST00000580972 DPEP1P16444 411 aa7.44□□□□□ -1.22
RNU4ATAC-201ENST00000580972 RBM25P49756 843 aaKnown RBP7.44□□□□□ -1.22
RNU4ATAC-201ENST00000580972 ZMYM1Q5SVZ6 1142 aa7.44□□□□□ -1.22
RNU4ATAC-201ENST00000580972 RASEFQ8IZ41 740 aa7.44□□□□□ -1.22
RNU4ATAC-201ENST00000580972 ANKRD2Q9GZV1 360 aa7.44□□□□□ -1.22
RNU4ATAC-201ENST00000580972 NSFL1CQ9UNZ2 370 aaKnown RBP7.44□□□□□ -1.22
RNU4ATAC-201ENST00000580972 XDHP47989 1333 aa7.44□□□□□ -1.22
RNU4ATAC-201ENST00000580972 C10orf71Q711Q0 1435 aa7.44□□□□□ -1.22
RNU4ATAC-201ENST00000580972 TUBGCP6Q96RT7 1819 aa7.43□□□□□ -1.22
RNU4ATAC-201ENST00000580972 RIMBP2O15034 1052 aa7.43□□□□□ -1.22
RNU4ATAC-201ENST00000580972 CPA1P15085 419 aa7.43□□□□□ -1.22
RNU4ATAC-201ENST00000580972 PDE6AP16499 860 aa7.43□□□□□ -1.22
RNU4ATAC-201ENST00000580972 HMGB2P26583 209 aaKnown RBP7.43□□□□□ -1.22
RNU4ATAC-201ENST00000580972 HIBADHP31937 336 aaKnown RBP7.43□□□□□ -1.22
RNU4ATAC-201ENST00000580972 PDE6BP35913 854 aa7.43□□□□□ -1.22
RNU4ATAC-201ENST00000580972 PRPF40BQ6NWY9 871 aaKnown RBP7.43□□□□□ -1.22
RNU4ATAC-201ENST00000580972 CCDC125Q86Z20 511 aa7.43□□□□□ -1.22
RNU4ATAC-201ENST00000580972 TBC1D16Q8TBP0 767 aa7.43□□□□□ -1.22
RNU4ATAC-201ENST00000580972 ZNF384Q8TF68 577 aa7.43□□□□□ -1.22
RNU4ATAC-201ENST00000580972 MASTLQ96GX5 879 aa7.43□□□□□ -1.22
RNU4ATAC-201ENST00000580972 ZNF512BQ96KM6 892 aaPredicted RBP7.43□□□□□ -1.22
RNU4ATAC-201ENST00000580972 PUS7LQ9H0K6 701 aaKnown RBP7.43□□□□□ -1.22
RNU4ATAC-201ENST00000580972 GGA1Q9UJY5 639 aa7.43□□□□□ -1.22
RNU4ATAC-201ENST00000580972 ATP6V0A2Q9Y487 856 aa7.43□□□□□ -1.22
RNU4ATAC-201ENST00000580972 RBM8AQ9Y5S9 174 aaKnown RBP7.43□□□□□ -1.22
RNU4ATAC-201ENST00000580972 CCDC171Q6TFL3 1326 aa7.43□□□□□ -1.22
RNU4ATAC-201ENST00000580972 RAD50Q92878 1312 aa7.43□□□□□ -1.22
RNU4ATAC-201ENST00000580972 TCRBV5S4A2TA0A5A2 114 aa7.42□□□□□ -1.22
RNU4ATAC-201ENST00000580972 H0YIN7 160 aa7.42□□□□□ -1.22
RNU4ATAC-201ENST00000580972 C6orf229H3BNL8 230 aa7.42□□□□□ -1.22
RNU4ATAC-201ENST00000580972 BBOX1O75936 387 aa7.42□□□□□ -1.22
RNU4ATAC-201ENST00000580972 REC8O95072 547 aa7.42□□□□□ -1.22
RNU4ATAC-201ENST00000580972 KCNA3P22001 575 aa7.42□□□□□ -1.22
RNU4ATAC-201ENST00000580972 ADD2P35612 726 aa7.42□□□□□ -1.22
RNU4ATAC-201ENST00000580972 DOK7Q18PE1 504 aa7.42□□□□□ -1.22
RNU4ATAC-201ENST00000580972 WASHC4Q2M389 1173 aa7.42□□□□□ -1.22
RNU4ATAC-201ENST00000580972 TTLL5Q6EMB2 1281 aa7.42□□□□□ -1.22
RNU4ATAC-201ENST00000580972 STYK1Q6J9G0 422 aa7.42□□□□□ -1.22
RNU4ATAC-201ENST00000580972 ADGRA1Q86SQ6 560 aa7.42□□□□□ -1.22
RNU4ATAC-201ENST00000580972 VPS37DQ86XT2 251 aa7.42□□□□□ -1.22
RNU4ATAC-201ENST00000580972 SP8Q8IXZ3 490 aa7.42□□□□□ -1.22
RNU4ATAC-201ENST00000580972 KLHL34Q8N239 644 aa7.42□□□□□ -1.22
RNU4ATAC-201ENST00000580972 MAGEB6Q8N7X4 407 aa7.42□□□□□ -1.22
RNU4ATAC-201ENST00000580972 MIGA1Q8NAN2 632 aa7.42□□□□□ -1.22
RNU4ATAC-201ENST00000580972 IPO9Q96P70 1041 aaKnown RBP7.42□□□□□ -1.22
RNU4ATAC-201ENST00000580972 MXD3Q9BW11 206 aa7.42□□□□□ -1.22
RNU4ATAC-201ENST00000580972 TBC1D2Q9BYX2 928 aa7.42□□□□□ -1.22
RNU4ATAC-201ENST00000580972 PPP1R1BQ9UD71 204 aaPredicted RBP7.42□□□□□ -1.22
RNU4ATAC-201ENST00000580972 LEMD3Q9Y2U8 911 aa7.42□□□□□ -1.22
RNU4ATAC-201ENST00000580972 SNX14Q9Y5W7 946 aa7.42□□□□□ -1.22
RNU4ATAC-201ENST00000580972 ZNF532Q9HCE3 1301 aa7.42□□□□□ -1.22
RNU4ATAC-201ENST00000580972 RFX7Q2KHR2 1363 aa7.42□□□□□ -1.22
RNU4ATAC-201ENST00000580972 RGPD3A6NKT7 1758 aaPredicted RBP7.41□□□□□ -1.22
RNU4ATAC-201ENST00000580972 LAMB2P55268 1798 aa7.41□□□□□ -1.22
RNU4ATAC-201ENST00000580972 RGPD4Q7Z3J3 1758 aa7.41□□□□□ -1.22
RNU4ATAC-201ENST00000580972 HIP1O00291 1037 aa7.41□□□□□ -1.22
RNU4ATAC-201ENST00000580972 SLC27A2O14975 620 aa7.41□□□□□ -1.22
RNU4ATAC-201ENST00000580972 PRKAB2O43741 272 aa7.41□□□□□ -1.22
RNU4ATAC-201ENST00000580972 C21orf2O43822 256 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms