RNA–Protein interactions for RNA: ENST00000580182.5

PPP4R1-215, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-215ENST00000580182 COA1Q9GZY4 146 aa23.36■■□□□ 1.33
PPP4R1-215ENST00000580182 ADARB2Q9NS39 739 aaKnown RBP23.36■■□□□ 1.33
PPP4R1-215ENST00000580182 MICALL2Q8IY33 904 aa23.35■■□□□ 1.33
PPP4R1-215ENST00000580182 FTSJ3Q8IY81 847 aaKnown RBP23.35■■□□□ 1.33
PPP4R1-215ENST00000580182 DZIP1LQ8IYY4 767 aaKnown RBP23.35■■□□□ 1.33
PPP4R1-215ENST00000580182 USP17L3A6NCW0 530 aa23.34■■□□□ 1.33
PPP4R1-215ENST00000580182 USP17L4A6NCW7 530 aa23.34■■□□□ 1.33
PPP4R1-215ENST00000580182 MAP1SQ66K74 1059 aaPredicted RBP23.34■■□□□ 1.33
PPP4R1-215ENST00000580182 C15orf52Q6ZUT6 534 aaKnown RBP23.34■■□□□ 1.33
PPP4R1-215ENST00000580182 USP50Q70EL3 339 aaPredicted RBP23.34■■□□□ 1.33
PPP4R1-215ENST00000580182 USP17L1Q7RTZ2 530 aa23.34■■□□□ 1.33
PPP4R1-215ENST00000580182 DPF2Q92785 391 aa23.34■■□□□ 1.33
PPP4R1-215ENST00000580182 MXD3Q9BW11 206 aa23.34■■□□□ 1.33
PPP4R1-215ENST00000580182 HDAC5Q9UQL6 1122 aa23.34■■□□□ 1.33
PPP4R1-215ENST00000580182 MROH5Q6ZUA9 1318 aa23.33■■□□□ 1.33
PPP4R1-215ENST00000580182 PSME4Q14997 1843 aa23.33■■□□□ 1.33
PPP4R1-215ENST00000580182 HIRAP54198 1017 aaPredicted RBP23.33■■□□□ 1.33
PPP4R1-215ENST00000580182 HTRA3P83110 453 aa23.33■■□□□ 1.33
PPP4R1-215ENST00000580182 METTL24Q5JXM2 366 aa23.33■■□□□ 1.33
PPP4R1-215ENST00000580182 RSBN1LQ6PCB5 846 aaPredicted RBP23.33■■□□□ 1.33
PPP4R1-215ENST00000580182 TRPM4Q8TD43 1214 aa23.33■■□□□ 1.33
PPP4R1-215ENST00000580182 FBXW7Q969H0 707 aa23.33■■□□□ 1.33
PPP4R1-215ENST00000580182 YTHDC1Q96MU7 727 aaKnown RBP23.33■■□□□ 1.33
PPP4R1-215ENST00000580182 CD209Q9NNX6 404 aa23.33■■□□□ 1.33
PPP4R1-215ENST00000580182 RCAN3Q9UKA8 241 aa23.33■■□□□ 1.33
PPP4R1-215ENST00000580182 H7C1D1 291 aa23.32■■□□□ 1.32
PPP4R1-215ENST00000580182 RPS12P25398 132 aaKnown RBP23.32■■□□□ 1.32
PPP4R1-215ENST00000580182 SAMD7Q7Z3H4 446 aa23.32■■□□□ 1.32
PPP4R1-215ENST00000580182 VGLL2Q8N8G2 317 aa23.32■■□□□ 1.32
PPP4R1-215ENST00000580182 SIL1Q9H173 461 aa23.32■■□□□ 1.32
PPP4R1-215ENST00000580182 PA2G4Q9UQ80 394 aaKnown RBP23.32■■□□□ 1.32
PPP4R1-215ENST00000580182 ZNF646O15015 1829 aaPredicted RBP23.31■■□□□ 1.32
PPP4R1-215ENST00000580182 EYA2O00167 538 aa23.31■■□□□ 1.32
PPP4R1-215ENST00000580182 EGFRP00533 1210 aa23.31■■□□□ 1.32
PPP4R1-215ENST00000580182 UBE4AQ14139 1066 aa23.31■■□□□ 1.32
PPP4R1-215ENST00000580182 ATG9AQ7Z3C6 839 aa23.31■■□□□ 1.32
PPP4R1-215ENST00000580182 ITPRIPQ8IWB1 547 aa23.31■■□□□ 1.32
PPP4R1-215ENST00000580182 PANK1Q8TE04 598 aa23.31■■□□□ 1.32
PPP4R1-215ENST00000580182 ITGBL1O95965 494 aaPredicted RBP23.3■■□□□ 1.32
PPP4R1-215ENST00000580182 GNAI2P04899 355 aa23.3■■□□□ 1.32
PPP4R1-215ENST00000580182 APLP1P51693 650 aa23.3■■□□□ 1.32
PPP4R1-215ENST00000580182 DACT2Q5SW24 774 aa23.3■■□□□ 1.32
PPP4R1-215ENST00000580182 CNTROBQ8N137 903 aa23.3■■□□□ 1.32
PPP4R1-215ENST00000580182 GMLQ99445 158 aa23.3■■□□□ 1.32
PPP4R1-215ENST00000580182 PDE8BO95263 885 aa23.29■■□□□ 1.32
PPP4R1-215ENST00000580182 GYG1P46976 350 aa23.29■■□□□ 1.32
PPP4R1-215ENST00000580182 GTF2IP78347 998 aa23.29■■□□□ 1.32
PPP4R1-215ENST00000580182 TBC1D10BQ4KMP7 808 aaPredicted RBP23.29■■□□□ 1.32
PPP4R1-215ENST00000580182 RBM26Q5T8P6 1007 aaKnown RBP23.29■■□□□ 1.32
PPP4R1-215ENST00000580182 AGBL3Q8NEM8 1001 aa23.29■■□□□ 1.32
PPP4R1-215ENST00000580182 SRGAP3O43295 1099 aa23.28■■□□□ 1.32
PPP4R1-215ENST00000580182 STRIP1Q5VSL9 837 aa23.28■■□□□ 1.32
PPP4R1-215ENST00000580182 TTLL5Q6EMB2 1281 aa23.28■■□□□ 1.32
PPP4R1-215ENST00000580182 ZNF804AQ7Z570 1209 aa23.28■■□□□ 1.32
PPP4R1-215ENST00000580182 C1orf115Q9H7X2 142 aa23.28■■□□□ 1.32
PPP4R1-215ENST00000580182 PASKQ96RG2 1323 aa23.28■■□□□ 1.32
PPP4R1-215ENST00000580182 CEP350Q5VT06 3117 aa23.28■■□□□ 1.32
PPP4R1-215ENST00000580182 ZBTB7BO15156 539 aaPredicted RBP23.27■■□□□ 1.32
PPP4R1-215ENST00000580182 IL1R1P14778 569 aa23.27■■□□□ 1.32
PPP4R1-215ENST00000580182 MTX1Q13505 466 aa23.27■■□□□ 1.32
PPP4R1-215ENST00000580182 FAM84BQ96KN1 310 aaPredicted RBP23.27■■□□□ 1.32
PPP4R1-215ENST00000580182 ZNF609O15014 1411 aa23.26■■□□□ 1.31
PPP4R1-215ENST00000580182 PNMA6EA0A0J9YXQ4 647 aa23.26■■□□□ 1.31
PPP4R1-215ENST00000580182 FMR1Q06787 632 aaKnown RBP eCLIP23.26■■□□□ 1.312e-6■■■■□ 20.3
PPP4R1-215ENST00000580182 COPRSQ9NQ92 184 aa23.26■■□□□ 1.31
PPP4R1-215ENST00000580182 JAG2Q9Y219 1238 aa23.26■■□□□ 1.31
PPP4R1-215ENST00000580182 CIAO1O76071 339 aa23.25■■□□□ 1.31
PPP4R1-215ENST00000580182 USP17L8P0C7I0 530 aa23.25■■□□□ 1.31
PPP4R1-215ENST00000580182 FGFR2P21802 821 aa23.25■■□□□ 1.31
PPP4R1-215ENST00000580182 HIBADHP31937 336 aaKnown RBP23.24■■□□□ 1.31
PPP4R1-215ENST00000580182 ZNF280AP59817 542 aaPredicted RBP23.24■■□□□ 1.31
PPP4R1-215ENST00000580182 KIF4BQ2VIQ3 1234 aa23.24■■□□□ 1.31
PPP4R1-215ENST00000580182 CERS5Q8N5B7 392 aa23.24■■□□□ 1.31
PPP4R1-215ENST00000580182 PGAP2Q9UHJ9 254 aa23.24■■□□□ 1.31
PPP4R1-215ENST00000580182 FBXO3Q9UK99 471 aa23.24■■□□□ 1.31
PPP4R1-215ENST00000580182 TRAF5O00463 557 aa23.23■■□□□ 1.31
PPP4R1-215ENST00000580182 PUM3Q15397 648 aaKnown RBP23.23■■□□□ 1.31
PPP4R1-215ENST00000580182 FBXO33Q7Z6M2 555 aa23.23■■□□□ 1.31
PPP4R1-215ENST00000580182 TDRD7Q8NHU6 1098 aaKnown RBP23.23■■□□□ 1.31
PPP4R1-215ENST00000580182 IL15P40933 162 aaPredicted RBP23.22■■□□□ 1.31
PPP4R1-215ENST00000580182 ZC3H15Q8WU90 426 aaKnown RBP23.22■■□□□ 1.31
PPP4R1-215ENST00000580182 GLIS2Q9BZE0 524 aaPredicted RBP23.22■■□□□ 1.31
PPP4R1-215ENST00000580182 CEP126Q9P2H0 1117 aa23.22■■□□□ 1.31
PPP4R1-215ENST00000580182 IQSEC3Q9UPP2 1182 aaPredicted RBP23.22■■□□□ 1.31
PPP4R1-215ENST00000580182 ASTN2O75129 1339 aaPredicted RBP23.22■■□□□ 1.31
PPP4R1-215ENST00000580182 BCAMP50895 628 aa23.21■■□□□ 1.31
PPP4R1-215ENST00000580182 KIAA0825Q8IV33 1275 aa23.21■■□□□ 1.31
PPP4R1-215ENST00000580182 DNAJC5GQ8N7S2 189 aa23.21■■□□□ 1.31
PPP4R1-215ENST00000580182 MYOZ2Q9NPC6 264 aa23.21■■□□□ 1.31
PPP4R1-215ENST00000580182 COG6Q9Y2V7 657 aa23.21■■□□□ 1.31
PPP4R1-215ENST00000580182 MYO3BQ8WXR4 1341 aa23.21■■□□□ 1.31
PPP4R1-215ENST00000580182 SASH1O94885 1247 aa23.2■■□□□ 1.3
PPP4R1-215ENST00000580182 IFIT1P09914 478 aaKnown RBP23.2■■□□□ 1.3
PPP4R1-215ENST00000580182 MS4A1P11836 297 aa23.2■■□□□ 1.3
PPP4R1-215ENST00000580182 C20orf194Q5TEA3 1177 aa23.2■■□□□ 1.3
PPP4R1-215ENST00000580182 DLK2Q6UY11 383 aa23.2■■□□□ 1.3
PPP4R1-215ENST00000580182 LPIN2Q92539 896 aa23.2■■□□□ 1.3
PPP4R1-215ENST00000580182 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.2■■□□□ 1.3
PPP4R1-215ENST00000580182 SLC5A1P13866 664 aa23.19■■□□□ 1.3
PPP4R1-215ENST00000580182 ATP8B2P98198 1209 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms