RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 HSP90B1P14625 803 aaKnown RBP10.01□□□□□ -0.81
COPS3-215ENST00000578317 GPTP24298 496 aa10.01□□□□□ -0.81
COPS3-215ENST00000578317 MTX1Q13505 466 aa10.01□□□□□ -0.81
COPS3-215ENST00000578317 SUSD4Q5VX71 490 aa10.01□□□□□ -0.81
COPS3-215ENST00000578317 DMRTA1Q5VZB9 504 aa10.01□□□□□ -0.81
COPS3-215ENST00000578317 TBC1D9BQ66K14 1250 aa10.01□□□□□ -0.81
COPS3-215ENST00000578317 ZBED2Q9BTP6 218 aa10.01□□□□□ -0.81
COPS3-215ENST00000578317 UTP14AQ9BVJ6 771 aaKnown RBP10.01□□□□□ -0.81
COPS3-215ENST00000578317 PLA2G12BQ9BX93 195 aa10.01□□□□□ -0.81
COPS3-215ENST00000578317 ARHGAP33O14559 1287 aa10□□□□□ -0.81
COPS3-215ENST00000578317 HDAC1Q13547 482 aaPredicted RBP10□□□□□ -0.81
COPS3-215ENST00000578317 NFIXQ14938 502 aa10□□□□□ -0.81
COPS3-215ENST00000578317 SLC10A5Q5PT55 438 aa10□□□□□ -0.81
COPS3-215ENST00000578317 TPTE2Q6XPS3 522 aa10□□□□□ -0.81
COPS3-215ENST00000578317 KAZALD1Q96I82 304 aa10□□□□□ -0.81
COPS3-215ENST00000578317 CDHR2Q9BYE9 1310 aa10□□□□□ -0.81
COPS3-215ENST00000578317 NYXQ9GZU5 481 aa10□□□□□ -0.81
COPS3-215ENST00000578317 TRMT112Q9UI30 125 aaKnown RBP10□□□□□ -0.81
COPS3-215ENST00000578317 SH3TC1Q8TE82 1336 aa10□□□□□ -0.81
COPS3-215ENST00000578317 TRIM6-TRIM34B2RNG4 842 aa10□□□□□ -0.81
COPS3-215ENST00000578317 NTSR2O95665 410 aa10□□□□□ -0.81
COPS3-215ENST00000578317 ATP8B2P98198 1209 aa10□□□□□ -0.81
COPS3-215ENST00000578317 RABL6Q3YEC7 729 aaPredicted RBP10□□□□□ -0.81
COPS3-215ENST00000578317 UBE3BQ7Z3V4 1068 aa10□□□□□ -0.81
COPS3-215ENST00000578317 ANKRD44Q8N8A2 993 aa10□□□□□ -0.81
COPS3-215ENST00000578317 FAM89AQ96GI7 184 aa10□□□□□ -0.81
COPS3-215ENST00000578317 TRAK2O60296 914 aa9.99□□□□□ -0.81
COPS3-215ENST00000578317 CSF1RP07333 972 aa9.99□□□□□ -0.81
COPS3-215ENST00000578317 CEP85Q6P2H3 762 aa9.99□□□□□ -0.81
COPS3-215ENST00000578317 SIRT2Q8IXJ6 389 aa9.99□□□□□ -0.81
COPS3-215ENST00000578317 NLRP7Q8WX94 980 aa9.99□□□□□ -0.81
COPS3-215ENST00000578317 SUCLG2Q96I99 432 aa9.99□□□□□ -0.81
COPS3-215ENST00000578317 RWDD1Q9H446 243 aaPredicted RBP9.99□□□□□ -0.81
COPS3-215ENST00000578317 LRRFIP2Q9Y608 721 aaKnown RBP9.99□□□□□ -0.81
COPS3-215ENST00000578317 TUBGCP6Q96RT7 1819 aa9.98□□□□□ -0.81
COPS3-215ENST00000578317 IRS4O14654 1257 aaPredicted RBP9.98□□□□□ -0.81
COPS3-215ENST00000578317 FOXO4P98177 505 aa9.98□□□□□ -0.81
COPS3-215ENST00000578317 PROCA1Q8NCQ7 364 aaPredicted RBP9.98□□□□□ -0.81
COPS3-215ENST00000578317 CCDC136Q96JN2 1154 aa9.98□□□□□ -0.81
COPS3-215ENST00000578317 POLR3EQ9NVU0 708 aa9.98□□□□□ -0.81
COPS3-215ENST00000578317 CARMIL3Q8ND23 1372 aa9.97□□□□□ -0.81
COPS3-215ENST00000578317 PDE8AO60658 829 aa9.97□□□□□ -0.81
COPS3-215ENST00000578317 HMMRO75330 724 aa9.97□□□□□ -0.81
COPS3-215ENST00000578317 EPHA10Q5JZY3 1008 aa9.97□□□□□ -0.81
COPS3-215ENST00000578317 BICDL1Q6ZP65 573 aa9.97□□□□□ -0.81
COPS3-215ENST00000578317 NBPF5PQ86XG9 351 aaPredicted RBP9.97□□□□□ -0.81
COPS3-215ENST00000578317 SSH3Q8TE77 659 aa9.97□□□□□ -0.81
COPS3-215ENST00000578317 BICC1Q9H694 974 aaKnown RBP9.97□□□□□ -0.81
COPS3-215ENST00000578317 POLRMTO00411 1230 aaKnown RBP9.96□□□□□ -0.81
COPS3-215ENST00000578317 SERPINB2P05120 415 aa9.96□□□□□ -0.81
COPS3-215ENST00000578317 PBX2P40425 430 aa9.96□□□□□ -0.81
COPS3-215ENST00000578317 MYSM1Q5VVJ2 828 aa9.96□□□□□ -0.81
COPS3-215ENST00000578317 SYNE4Q8N205 404 aa9.96□□□□□ -0.81
COPS3-215ENST00000578317 JARID2Q92833 1246 aaPredicted RBP9.96□□□□□ -0.81
COPS3-215ENST00000578317 UBR3Q6ZT12 1888 aa9.96□□□□□ -0.81
COPS3-215ENST00000578317 IGHDP01880 384 aa9.96□□□□□ -0.82
COPS3-215ENST00000578317 GTF2E1P29083 439 aaPredicted RBP9.96□□□□□ -0.82
COPS3-215ENST00000578317 DDR1Q08345 913 aa9.96□□□□□ -0.82
COPS3-215ENST00000578317 SF3B3Q15393 1217 aaKnown RBP9.96□□□□□ -0.82
COPS3-215ENST00000578317 DIXDC1Q155Q3 683 aa9.96□□□□□ -0.82
COPS3-215ENST00000578317 RTL5Q5HYW3 569 aaPredicted RBP9.96□□□□□ -0.82
COPS3-215ENST00000578317 LMBR1LQ6UX01 489 aa9.96□□□□□ -0.82
COPS3-215ENST00000578317 TTLL11Q8NHH1 800 aa9.96□□□□□ -0.82
COPS3-215ENST00000578317 RBM46Q8TBY0 533 aaKnown RBP9.96□□□□□ -0.82
COPS3-215ENST00000578317 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.96□□□□□ -0.82
COPS3-215ENST00000578317 DCTPP1Q9H773 170 aa9.96□□□□□ -0.82
COPS3-215ENST00000578317 KDM2BQ8NHM5 1336 aa9.95□□□□□ -0.82
COPS3-215ENST00000578317 PNMA6EA0A0J9YXQ4 647 aa9.95□□□□□ -0.82
COPS3-215ENST00000578317 KLRG2A4D1S0 409 aaPredicted RBP9.95□□□□□ -0.82
COPS3-215ENST00000578317 SRGAP3O43295 1099 aa9.95□□□□□ -0.82
COPS3-215ENST00000578317 MMP10P09238 476 aa9.95□□□□□ -0.82
COPS3-215ENST00000578317 CLK2P49760 499 aaKnown RBP9.95□□□□□ -0.82
COPS3-215ENST00000578317 CTSWP56202 376 aa9.95□□□□□ -0.82
COPS3-215ENST00000578317 ERFEQ4G0M1 354 aa9.95□□□□□ -0.82
COPS3-215ENST00000578317 B4GALNT3Q6L9W6 998 aa9.95□□□□□ -0.82
COPS3-215ENST00000578317 CENPQQ7L2Z9 268 aaPredicted RBP9.95□□□□□ -0.82
COPS3-215ENST00000578317 SMC5Q8IY18 1101 aa9.95□□□□□ -0.82
COPS3-215ENST00000578317 CNBD1Q8NA66 436 aa9.95□□□□□ -0.82
COPS3-215ENST00000578317 GCC1Q96CN9 775 aa9.95□□□□□ -0.82
COPS3-215ENST00000578317 NLRP3Q96P20 1036 aa9.95□□□□□ -0.82
COPS3-215ENST00000578317 SLC4A5Q9BY07 1137 aa9.95□□□□□ -0.82
COPS3-215ENST00000578317 PDGFDQ9GZP0 370 aaPredicted RBP9.95□□□□□ -0.82
COPS3-215ENST00000578317 NOP58Q9Y2X3 529 aaKnown RBP9.95□□□□□ -0.82
COPS3-215ENST00000578317 PARP3Q9Y6F1 533 aa9.95□□□□□ -0.82
COPS3-215ENST00000578317 ARFGEF2Q9Y6D5 1785 aa9.95□□□□□ -0.82
COPS3-215ENST00000578317 FAM177BA6PVY3 158 aa9.94□□□□□ -0.82
COPS3-215ENST00000578317 HCLS1P14317 486 aaPredicted RBP9.94□□□□□ -0.82
COPS3-215ENST00000578317 PRR5LQ6MZQ0 368 aa9.94□□□□□ -0.82
COPS3-215ENST00000578317 NUDT18Q6ZVK8 323 aa9.94□□□□□ -0.82
COPS3-215ENST00000578317 NUTM1Q86Y26 1132 aa9.94□□□□□ -0.82
COPS3-215ENST00000578317 BRIP1Q9BX63 1249 aa9.94□□□□□ -0.82
COPS3-215ENST00000578317 COPRSQ9NQ92 184 aa9.94□□□□□ -0.82
COPS3-215ENST00000578317 RTL9Q8NET4 1388 aa9.94□□□□□ -0.82
COPS3-215ENST00000578317 QSER1Q2KHR3 1735 aa9.93□□□□□ -0.82
COPS3-215ENST00000578317 RIC1Q4ADV7 1423 aa9.93□□□□□ -0.82
COPS3-215ENST00000578317 SMAPO00193 183 aa9.93□□□□□ -0.82
COPS3-215ENST00000578317 RAD21O60216 631 aa9.93□□□□□ -0.82
COPS3-215ENST00000578317 RFX5P48382 616 aaPredicted RBP9.93□□□□□ -0.82
COPS3-215ENST00000578317 ST5P78524 1137 aa9.93□□□□□ -0.82
COPS3-215ENST00000578317 R3HDM1Q15032 1099 aaKnown RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms