RNA–Protein interactions for RNA: ENST00000578234.1

SMARCD2-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2

Gene SMARCD2, Length 595 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-207ENST00000578234 CCT4P50991 539 aaKnown RBP16.07■□□□□ 0.16
SMARCD2-207ENST00000578234 MLLT1Q03111 559 aaPredicted RBP16.07■□□□□ 0.16
SMARCD2-207ENST00000578234 SCARF1Q14162 830 aa16.07■□□□□ 0.16
SMARCD2-207ENST00000578234 UBE3BQ7Z3V4 1068 aa16.07■□□□□ 0.16
SMARCD2-207ENST00000578234 PLA2G12BQ9BX93 195 aa16.07■□□□□ 0.16
SMARCD2-207ENST00000578234 MYOZ2Q9NPC6 264 aa16.07■□□□□ 0.16
SMARCD2-207ENST00000578234 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.07■□□□□ 0.16
SMARCD2-207ENST00000578234 ASTN2O75129 1339 aaPredicted RBP16.07■□□□□ 0.16
SMARCD2-207ENST00000578234 MED23Q9ULK4 1368 aa16.07■□□□□ 0.16
SMARCD2-207ENST00000578234 AKAP11Q9UKA4 1901 aa16.06■□□□□ 0.16
SMARCD2-207ENST00000578234 PITPNM2Q9BZ72 1349 aa16.06■□□□□ 0.16
SMARCD2-207ENST00000578234 FLIIQ13045 1269 aa16.06■□□□□ 0.16
SMARCD2-207ENST00000578234 GCKRQ14397 625 aa16.06■□□□□ 0.16
SMARCD2-207ENST00000578234 ANGEL2Q5VTE6 544 aaKnown RBP16.06■□□□□ 0.16
SMARCD2-207ENST00000578234 LEMD3Q9Y2U8 911 aa16.06■□□□□ 0.16
SMARCD2-207ENST00000578234 CACNA1FO60840 1977 aa16.06■□□□□ 0.16
SMARCD2-207ENST00000578234 TRPA1O75762 1119 aa16.05■□□□□ 0.16
SMARCD2-207ENST00000578234 IGHMBP2P38935 993 aaKnown RBP16.05■□□□□ 0.16
SMARCD2-207ENST00000578234 KIF23Q02241 960 aaPredicted RBP16.05■□□□□ 0.16
SMARCD2-207ENST00000578234 TTLL12Q14166 644 aaPredicted RBP16.05■□□□□ 0.16
SMARCD2-207ENST00000578234 CDCA5Q96FF9 252 aa16.05■□□□□ 0.16
SMARCD2-207ENST00000578234 SCAF8Q9UPN6 1271 aaKnown RBP16.05■□□□□ 0.16
SMARCD2-207ENST00000578234 CSF1RP07333 972 aa16.04■□□□□ 0.16
SMARCD2-207ENST00000578234 CASP7P55210 303 aa16.04■□□□□ 0.16
SMARCD2-207ENST00000578234 FKBP1BP68106 108 aa16.04■□□□□ 0.16
SMARCD2-207ENST00000578234 FKBP5Q13451 457 aaPredicted RBP16.04■□□□□ 0.16
SMARCD2-207ENST00000578234 STRIP1Q5VSL9 837 aa16.04■□□□□ 0.16
SMARCD2-207ENST00000578234 WDR63Q8IWG1 891 aa16.04■□□□□ 0.16
SMARCD2-207ENST00000578234 LINS1Q8NG48 757 aa16.04■□□□□ 0.16
SMARCD2-207ENST00000578234 DNAAF4Q8WXU2 420 aa16.04■□□□□ 0.16
SMARCD2-207ENST00000578234 COA1Q9GZY4 146 aa16.04■□□□□ 0.16
SMARCD2-207ENST00000578234 MYH16Q9H6N6 1097 aa16.04■□□□□ 0.16
SMARCD2-207ENST00000578234 SPEF2Q9C093 1822 aa16.03■□□□□ 0.16
SMARCD2-207ENST00000578234 MYO3BQ8WXR4 1341 aa16.03■□□□□ 0.16
SMARCD2-207ENST00000578234 FANCIQ9NVI1 1328 aa16.03■□□□□ 0.16
SMARCD2-207ENST00000578234 VAMP4O75379 141 aa16.03■□□□□ 0.16
SMARCD2-207ENST00000578234 SLC10A3P09131 477 aa16.03■□□□□ 0.16
SMARCD2-207ENST00000578234 ITGA6P23229 1130 aa16.03■□□□□ 0.16
SMARCD2-207ENST00000578234 MMP14P50281 582 aa16.03■□□□□ 0.16
SMARCD2-207ENST00000578234 DACT2Q5SW24 774 aa16.03■□□□□ 0.16
SMARCD2-207ENST00000578234 OGFOD1Q8N543 542 aa16.03■□□□□ 0.16
SMARCD2-207ENST00000578234 ANKRD2Q9GZV1 360 aa16.03■□□□□ 0.16
SMARCD2-207ENST00000578234 SAGE1Q9NXZ1 904 aa16.03■□□□□ 0.16
SMARCD2-207ENST00000578234 ZNF804BA4D1E1 1349 aa16.02■□□□□ 0.16
SMARCD2-207ENST00000578234 TXNRD3Q86VQ6 643 aa16.02■□□□□ 0.16
SMARCD2-207ENST00000578234 FAM9BQ8IZU0 186 aa16.02■□□□□ 0.16
SMARCD2-207ENST00000578234 MIER1Q8N108 512 aa16.02■□□□□ 0.16
SMARCD2-207ENST00000578234 MPHOSPH8Q99549 860 aa16.02■□□□□ 0.16
SMARCD2-207ENST00000578234 REM2Q8IYK8 340 aaPredicted RBP16.01■□□□□ 0.15
SMARCD2-207ENST00000578234 WNT10BO00744 389 aa16■□□□□ 0.15
SMARCD2-207ENST00000578234 RGS19P49795 217 aa16■□□□□ 0.15
SMARCD2-207ENST00000578234 NBPF9Q3BBW0 867 aa16■□□□□ 0.15
SMARCD2-207ENST00000578234 PRAMEF18Q5VWM3 479 aa16■□□□□ 0.15
SMARCD2-207ENST00000578234 TTLL5Q6EMB2 1281 aa16■□□□□ 0.15
SMARCD2-207ENST00000578234 CSRNP1Q96S65 589 aa16■□□□□ 0.15
SMARCD2-207ENST00000578234 MXD3Q9BW11 206 aa16■□□□□ 0.15
SMARCD2-207ENST00000578234 RNF186Q9NXI6 227 aa16■□□□□ 0.15
SMARCD2-207ENST00000578234 ZNF646O15015 1829 aaPredicted RBP15.99■□□□□ 0.15
SMARCD2-207ENST00000578234 ANKRD18BA2A2Z9 1011 aa15.99■□□□□ 0.15
SMARCD2-207ENST00000578234 KCNJ4P48050 445 aa15.99■□□□□ 0.15
SMARCD2-207ENST00000578234 EXOSC9Q06265 439 aaKnown RBP15.99■□□□□ 0.15
SMARCD2-207ENST00000578234 MKRN3Q13064 507 aaKnown RBP15.99■□□□□ 0.15
SMARCD2-207ENST00000578234 SALL2Q9Y467 1007 aaPredicted RBP15.99■□□□□ 0.15
SMARCD2-207ENST00000578234 PAPPA2Q9BXP8 1791 aa15.98■□□□□ 0.15
SMARCD2-207ENST00000578234 UBE2Q2LH0YL09 131 aa15.98■□□□□ 0.15
SMARCD2-207ENST00000578234 CHRNDQ07001 517 aa15.98■□□□□ 0.15
SMARCD2-207ENST00000578234 PRKG1Q13976 671 aa15.98■□□□□ 0.15
SMARCD2-207ENST00000578234 MOB2Q70IA6 237 aa15.98■□□□□ 0.15
SMARCD2-207ENST00000578234 RASAL3Q86YV0 1011 aa15.98■□□□□ 0.15
SMARCD2-207ENST00000578234 KLRK1P26718 216 aa15.97■□□□□ 0.15
SMARCD2-207ENST00000578234 SOX10P56693 466 aa15.97■□□□□ 0.15
SMARCD2-207ENST00000578234 FOXO4P98177 505 aa15.97■□□□□ 0.15
SMARCD2-207ENST00000578234 IFIT5Q13325 482 aaKnown RBP15.97■□□□□ 0.15
SMARCD2-207ENST00000578234 BEND3Q5T5X7 828 aa15.97■□□□□ 0.15
SMARCD2-207ENST00000578234 C15orf52Q6ZUT6 534 aaKnown RBP15.97■□□□□ 0.15
SMARCD2-207ENST00000578234 HDAC9Q9UKV0 1011 aa15.97■□□□□ 0.15
SMARCD2-207ENST00000578234 F6X3S4 739 aa15.96■□□□□ 0.15
SMARCD2-207ENST00000578234 NF2P35240 595 aa15.96■□□□□ 0.15
SMARCD2-207ENST00000578234 GTF2IP78347 998 aa15.96■□□□□ 0.15
SMARCD2-207ENST00000578234 KIAA0825Q8IV33 1275 aa15.96■□□□□ 0.15
SMARCD2-207ENST00000578234 CD209Q9NNX6 404 aa15.96■□□□□ 0.15
SMARCD2-207ENST00000578234 CHMP3Q9Y3E7 222 aa15.96■□□□□ 0.15
SMARCD2-207ENST00000578234 IRS2Q9Y4H2 1338 aa15.95■□□□□ 0.14
SMARCD2-207ENST00000578234 CCER2I3L3R5 266 aa15.95■□□□□ 0.14
SMARCD2-207ENST00000578234 ZBED3Q96IU2 234 aaPredicted RBP15.95■□□□□ 0.14
SMARCD2-207ENST00000578234 SPINK5Q9NQ38 1064 aaPredicted RBP15.95■□□□□ 0.14
SMARCD2-207ENST00000578234 SASH1O94885 1247 aa15.94■□□□□ 0.14
SMARCD2-207ENST00000578234 APOBEC3FQ8IUX4 373 aaKnown RBP15.94■□□□□ 0.14
SMARCD2-207ENST00000578234 HELBQ8NG08 1087 aaPredicted RBP15.94■□□□□ 0.14
SMARCD2-207ENST00000578234 SNAP23O00161 211 aa15.93■□□□□ 0.14
SMARCD2-207ENST00000578234 GRM8O00222 908 aa15.93■□□□□ 0.14
SMARCD2-207ENST00000578234 TAF5LO75529 589 aa15.93■□□□□ 0.14
SMARCD2-207ENST00000578234 TBC1D8O95759 1140 aa15.93■□□□□ 0.14
SMARCD2-207ENST00000578234 CCDC57Q2TAC2 916 aa15.93■□□□□ 0.14
SMARCD2-207ENST00000578234 LMBR1LQ6UX01 489 aa15.93■□□□□ 0.14
SMARCD2-207ENST00000578234 IL1R1P14778 569 aa15.92■□□□□ 0.14
SMARCD2-207ENST00000578234 TM4SF4P48230 202 aa15.92■□□□□ 0.14
SMARCD2-207ENST00000578234 EPHA10Q5JZY3 1008 aa15.92■□□□□ 0.14
SMARCD2-207ENST00000578234 LDHAL6AQ6ZMR3 332 aa15.92■□□□□ 0.14
SMARCD2-207ENST00000578234 ZNF804AQ7Z570 1209 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms