RNA–Protein interactions for RNA: ENST00000578049.3

SEC22B-201, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22B, Length 6,922 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-201ENST00000578049 CREB3L3Q68CJ9 461 aa12.19□□□□□ -0.46
SEC22B-201ENST00000578049 SYT10Q6XYQ8 523 aa12.19□□□□□ -0.46
SEC22B-201ENST00000578049 PEG3Q9GZU2 1588 aa12.19□□□□□ -0.46
SEC22B-201ENST00000578049 MPHOSPH10O00566 681 aaKnown RBP12.18□□□□□ -0.46
SEC22B-201ENST00000578049 MICALL1Q8N3F8 863 aa12.18□□□□□ -0.46
SEC22B-201ENST00000578049 IQUBQ8NA54 791 aa12.18□□□□□ -0.46
SEC22B-201ENST00000578049 CRNKL1Q9BZJ0 848 aaKnown RBP12.18□□□□□ -0.46
SEC22B-201ENST00000578049 RBSNQ9H1K0 784 aa12.18□□□□□ -0.46
SEC22B-201ENST00000578049 IFNKQ9P0W0 207 aa12.18□□□□□ -0.46
SEC22B-201ENST00000578049 A0A1B0GUA9 196 aa12.18□□□□□ -0.46
SEC22B-201ENST00000578049 DNA2P51530 1060 aa12.18□□□□□ -0.46
SEC22B-201ENST00000578049 EVCP57679 992 aa12.18□□□□□ -0.46
SEC22B-201ENST00000578049 CRACR2BQ8N4Y2 399 aaPredicted RBP12.18□□□□□ -0.46
SEC22B-201ENST00000578049 LARP6Q9BRS8 491 aaKnown RBP12.18□□□□□ -0.46
SEC22B-201ENST00000578049 CLSTN2Q9H4D0 955 aa12.18□□□□□ -0.46
SEC22B-201ENST00000578049 TSPY2A6NKD2 308 aa12.18□□□□□ -0.46
SEC22B-201ENST00000578049 RAPGEF3O95398 923 aa12.18□□□□□ -0.46
SEC22B-201ENST00000578049 MATR3P43243 847 aaKnown RBP eCLIP12.18□□□□□ -0.46
SEC22B-201ENST00000578049 UBE4AQ14139 1066 aa12.18□□□□□ -0.46
SEC22B-201ENST00000578049 CFAP58Q5T655 872 aa12.18□□□□□ -0.46
SEC22B-201ENST00000578049 BAG1Q99933 345 aaPredicted RBP12.18□□□□□ -0.46
SEC22B-201ENST00000578049 RRAGDQ9NQL2 400 aaPredicted RBP12.18□□□□□ -0.46
SEC22B-201ENST00000578049 HOMER2Q9NSB8 354 aa12.18□□□□□ -0.46
SEC22B-201ENST00000578049 RLBP1P12271 317 aa12.18□□□□□ -0.46
SEC22B-201ENST00000578049 ZMYM4Q5VZL5 1548 aa12.18□□□□□ -0.46
SEC22B-201ENST00000578049 CCDC6Q16204 474 aa12.18□□□□□ -0.46
SEC22B-201ENST00000578049 MPRIPQ6WCQ1 1025 aa12.18□□□□□ -0.46
SEC22B-201ENST00000578049 CEP128Q6ZU80 1094 aa12.18□□□□□ -0.46
SEC22B-201ENST00000578049 MTRF1LQ9UGC7 380 aaKnown RBP12.18□□□□□ -0.46
SEC22B-201ENST00000578049 MKRN1Q9UHC7 482 aaKnown RBP12.18□□□□□ -0.46
SEC22B-201ENST00000578049 PPP2R3AQ06190 1150 aa12.18□□□□□ -0.46
SEC22B-201ENST00000578049 PPP1R9BQ96SB3 815 aa12.18□□□□□ -0.46
SEC22B-201ENST00000578049 VPS18Q9P253 973 aa12.18□□□□□ -0.46
SEC22B-201ENST00000578049 PER1O15534 1290 aaPredicted RBP12.17□□□□□ -0.46
SEC22B-201ENST00000578049 ARHGAP6O43182 974 aa12.17□□□□□ -0.46
SEC22B-201ENST00000578049 ZGPATQ8N5A5 531 aaKnown RBP12.17□□□□□ -0.46
SEC22B-201ENST00000578049 CEP63Q96MT8 703 aa12.17□□□□□ -0.46
SEC22B-201ENST00000578049 AKR1B15C9JRZ8 316 aaPredicted RBP12.17□□□□□ -0.46
SEC22B-201ENST00000578049 GSTO1P78417 241 aa12.17□□□□□ -0.46
SEC22B-201ENST00000578049 MAPK8IP2Q13387 824 aaPredicted RBP12.17□□□□□ -0.46
SEC22B-201ENST00000578049 RILPL1Q5EBL4 403 aa12.17□□□□□ -0.46
SEC22B-201ENST00000578049 KRI1Q8N9T8 703 aaKnown RBP12.17□□□□□ -0.46
SEC22B-201ENST00000578049 IQCDQ96DY2 449 aa12.17□□□□□ -0.46
SEC22B-201ENST00000578049 RPGRIP1Q96KN7 1286 aa12.17□□□□□ -0.46
SEC22B-201ENST00000578049 COL17A1Q9UMD9 1497 aaPredicted RBP12.17□□□□□ -0.46
SEC22B-201ENST00000578049 CCDC50Q8IVM0 306 aa12.17□□□□□ -0.46
SEC22B-201ENST00000578049 PTPDC1A2A3K4 754 aa12.17□□□□□ -0.46
SEC22B-201ENST00000578049 PRC1O43663 620 aa12.17□□□□□ -0.46
SEC22B-201ENST00000578049 IRX3P78415 501 aaPredicted RBP12.17□□□□□ -0.46
SEC22B-201ENST00000578049 CCDC85AQ96PX6 553 aaPredicted RBP12.17□□□□□ -0.46
SEC22B-201ENST00000578049 CD109Q6YHK3 1445 aa12.17□□□□□ -0.46
SEC22B-201ENST00000578049 ITSN2Q9NZM3 1697 aa12.16□□□□□ -0.46
SEC22B-201ENST00000578049 DDX46Q7L014 1031 aaKnown RBP12.16□□□□□ -0.46
SEC22B-201ENST00000578049 RSRC1Q96IZ7 334 aaKnown RBP12.16□□□□□ -0.46
SEC22B-201ENST00000578049 MACROD2A1Z1Q3 448 aa12.16□□□□□ -0.46
SEC22B-201ENST00000578049 HOXB7P09629 217 aa12.16□□□□□ -0.46
SEC22B-201ENST00000578049 NMIQ13287 307 aaPredicted RBP12.16□□□□□ -0.46
SEC22B-201ENST00000578049 JAKMIP2Q96AA8 810 aa12.16□□□□□ -0.46
SEC22B-201ENST00000578049 A0A1W2PRG0 241 aa12.16□□□□□ -0.46
SEC22B-201ENST00000578049 ZBTB7BO15156 539 aaPredicted RBP12.16□□□□□ -0.46
SEC22B-201ENST00000578049 RBM5P52756 815 aaKnown RBP eCLIP12.16□□□□□ -0.46
SEC22B-201ENST00000578049 HAND2P61296 217 aa12.16□□□□□ -0.46
SEC22B-201ENST00000578049 C8orf58Q8NAV2 365 aa12.16□□□□□ -0.46
SEC22B-201ENST00000578049 SSH2Q76I76 1423 aa12.16□□□□□ -0.46
SEC22B-201ENST00000578049 ATP2B3Q16720 1220 aa12.16□□□□□ -0.46
SEC22B-201ENST00000578049 TSHZ3Q63HK5 1081 aa12.16□□□□□ -0.46
SEC22B-201ENST00000578049 NAP1L3Q99457 506 aaPredicted RBP12.16□□□□□ -0.46
SEC22B-201ENST00000578049 TM6SF1Q9BZW5 370 aa12.16□□□□□ -0.46
SEC22B-201ENST00000578049 TMX1Q9H3N1 280 aa12.16□□□□□ -0.46
SEC22B-201ENST00000578049 SHANK2Q9UPX8 1470 aa12.16□□□□□ -0.46
SEC22B-201ENST00000578049 ZNF569Q5MCW4 686 aa12.16□□□□□ -0.46
SEC22B-201ENST00000578049 CCDC174Q6PII3 467 aa12.16□□□□□ -0.46
SEC22B-201ENST00000578049 CCDC114Q96M63 670 aa12.16□□□□□ -0.46
SEC22B-201ENST00000578049 SAMD15Q9P1V8 674 aa12.16□□□□□ -0.46
SEC22B-201ENST00000578049 PTCD1O75127 700 aaKnown RBP12.16□□□□□ -0.46
SEC22B-201ENST00000578049 ZNF75DP51815 510 aa12.16□□□□□ -0.46
SEC22B-201ENST00000578049 GBP6Q6ZN66 633 aa12.16□□□□□ -0.46
SEC22B-201ENST00000578049 MLKLQ8NB16 471 aa12.16□□□□□ -0.46
SEC22B-201ENST00000578049 IFT74Q96LB3 600 aa12.16□□□□□ -0.46
SEC22B-201ENST00000578049 IQCGQ9H095 443 aaKnown RBP12.16□□□□□ -0.46
SEC22B-201ENST00000578049 KDM5BQ9UGL1 1544 aa12.15□□□□□ -0.46
SEC22B-201ENST00000578049 PTPRKQ15262 1439 aa12.15□□□□□ -0.46
SEC22B-201ENST00000578049 ARHGAP25P42331 645 aa12.15□□□□□ -0.46
SEC22B-201ENST00000578049 ZC3H6P61129 1189 aaKnown RBP12.15□□□□□ -0.46
SEC22B-201ENST00000578049 DNAJC21Q5F1R6 531 aaKnown RBP12.15□□□□□ -0.46
SEC22B-201ENST00000578049 CPLX4Q7Z7G2 160 aa12.15□□□□□ -0.46
SEC22B-201ENST00000578049 RNF113AO15541 343 aaKnown RBP12.15□□□□□ -0.46
SEC22B-201ENST00000578049 GIGYF1O75420 1035 aaPredicted RBP12.15□□□□□ -0.46
SEC22B-201ENST00000578049 VWA3BQ502W6 1294 aa12.15□□□□□ -0.46
SEC22B-201ENST00000578049 NAP1L4Q99733 375 aaKnown RBP12.15□□□□□ -0.46
SEC22B-201ENST00000578049 NAPGQ99747 312 aaPredicted RBP12.15□□□□□ -0.46
SEC22B-201ENST00000578049 HELLSQ9NRZ9 838 aa12.15□□□□□ -0.46
SEC22B-201ENST00000578049 ISM2Q6H9L7 571 aa12.15□□□□□ -0.46
SEC22B-201ENST00000578049 AFAP1L1Q8TED9 768 aa12.15□□□□□ -0.46
SEC22B-201ENST00000578049 FAM83GA6ND36 823 aa12.15□□□□□ -0.47
SEC22B-201ENST00000578049 ATP5DP30049 168 aa12.15□□□□□ -0.47
SEC22B-201ENST00000578049 SMC6Q96SB8 1091 aa12.15□□□□□ -0.47
SEC22B-201ENST00000578049 KRT13P13646 458 aa12.14□□□□□ -0.47
SEC22B-201ENST00000578049 AFMP43652 599 aa12.14□□□□□ -0.47
SEC22B-201ENST00000578049 ASIC1P78348 528 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms