RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 KDM5AP29375 1690 aaKnown RBP14.97□□□□□ -0.01
PCDHGB3-201ENST00000576222 AKR1B15C9JRZ8 316 aaPredicted RBP14.97□□□□□ -0.01
PCDHGB3-201ENST00000576222 SPECC1Q5M775 1068 aa14.97□□□□□ -0.01
PCDHGB3-201ENST00000576222 SYNMO15061 1565 aa14.97□□□□□ -0.01
PCDHGB3-201ENST00000576222 ADAMTS12P58397 1594 aa14.97□□□□□ -0.01
PCDHGB3-201ENST00000576222 ETF1P62495 437 aaKnown RBP14.97□□□□□ -0.01
PCDHGB3-201ENST00000576222 IFIT5Q13325 482 aaKnown RBP14.97□□□□□ -0.01
PCDHGB3-201ENST00000576222 ENOX2Q16206 610 aaKnown RBP14.97□□□□□ -0.01
PCDHGB3-201ENST00000576222 ZNF518AQ6AHZ1 1483 aa14.97□□□□□ -0.01
PCDHGB3-201ENST00000576222 ZFYP08048 801 aaPredicted RBP14.97□□□□□ -0.01
PCDHGB3-201ENST00000576222 STX17P56962 302 aa14.97□□□□□ -0.01
PCDHGB3-201ENST00000576222 MAP3K12Q12852 859 aa14.97□□□□□ -0.01
PCDHGB3-201ENST00000576222 ANKRD13DQ6ZTN6 518 aa14.97□□□□□ -0.01
PCDHGB3-201ENST00000576222 OTUD6BQ8N6M0 293 aa14.97□□□□□ -0.01
PCDHGB3-201ENST00000576222 NEK11Q8NG66 645 aa14.97□□□□□ -0.01
PCDHGB3-201ENST00000576222 TDRD7Q8NHU6 1098 aaKnown RBP14.97□□□□□ -0.01
PCDHGB3-201ENST00000576222 CTCFLQ8NI51 663 aaPredicted RBP14.97□□□□□ -0.01
PCDHGB3-201ENST00000576222 CACTINQ8WUQ7 758 aaKnown RBP14.97□□□□□ -0.01
PCDHGB3-201ENST00000576222 SBNO2Q9Y2G9 1366 aa14.97□□□□□ -0.01
PCDHGB3-201ENST00000576222 AKR1B10O60218 316 aa14.97□□□□□ -0.01
PCDHGB3-201ENST00000576222 CCDC178Q5BJE1 867 aa14.97□□□□□ -0.01
PCDHGB3-201ENST00000576222 PYM1Q9BRP8 204 aaKnown RBP14.97□□□□□ -0.01
PCDHGB3-201ENST00000576222 DENND4BO75064 1496 aaPredicted RBP14.96□□□□□ -0.01
PCDHGB3-201ENST00000576222 ATRIPQ8WXE1 791 aa14.96□□□□□ -0.01
PCDHGB3-201ENST00000576222 RNF41Q9H4P4 317 aaPredicted RBP14.96□□□□□ -0.01
PCDHGB3-201ENST00000576222 ABCF2Q9UG63 623 aa14.96□□□□□ -0.01
PCDHGB3-201ENST00000576222 DYDC1Q8WWB3 177 aa14.96□□□□□ -0.01
PCDHGB3-201ENST00000576222 FAM135BQ49AJ0 1406 aa14.96□□□□□ -0.01
PCDHGB3-201ENST00000576222 ABCC1P33527 1531 aa14.96□□□□□ -0.01
PCDHGB3-201ENST00000576222 NLRP12P59046 1061 aa14.96□□□□□ -0.02
PCDHGB3-201ENST00000576222 ATP2B3Q16720 1220 aa14.96□□□□□ -0.02
PCDHGB3-201ENST00000576222 GPR161Q8N6U8 529 aaKnown RBP14.96□□□□□ -0.02
PCDHGB3-201ENST00000576222 FAM76AQ8TAV0 307 aa14.96□□□□□ -0.02
PCDHGB3-201ENST00000576222 CCDC43Q96MW1 224 aaKnown RBP14.96□□□□□ -0.02
PCDHGB3-201ENST00000576222 CCDC113Q9H0I3 377 aa14.96□□□□□ -0.02
PCDHGB3-201ENST00000576222 KRT86O43790 486 aa14.95□□□□□ -0.02
PCDHGB3-201ENST00000576222 ZNF202O95125 648 aa14.95□□□□□ -0.02
PCDHGB3-201ENST00000576222 NF2P35240 595 aa14.95□□□□□ -0.02
PCDHGB3-201ENST00000576222 NLRP5P59047 1200 aa14.95□□□□□ -0.02
PCDHGB3-201ENST00000576222 MAP2K1Q02750 393 aaPredicted RBP14.95□□□□□ -0.02
PCDHGB3-201ENST00000576222 NAA16Q6N069 864 aaPredicted RBP14.95□□□□□ -0.02
PCDHGB3-201ENST00000576222 TICAM2Q86XR7 235 aa14.95□□□□□ -0.02
PCDHGB3-201ENST00000576222 THEMISQ8N1K5 641 aaPredicted RBP14.95□□□□□ -0.02
PCDHGB3-201ENST00000576222 CAPZA3Q96KX2 299 aa14.95□□□□□ -0.02
PCDHGB3-201ENST00000576222 TRIM47Q96LD4 638 aa14.95□□□□□ -0.02
PCDHGB3-201ENST00000576222 PAG1Q9NWQ8 432 aa14.95□□□□□ -0.02
PCDHGB3-201ENST00000576222 CNGA4Q8IV77 575 aa14.95□□□□□ -0.02
PCDHGB3-201ENST00000576222 FGFR1OPO95684 399 aaKnown RBP14.95□□□□□ -0.02
PCDHGB3-201ENST00000576222 IQCA1Q86XH1 822 aa14.95□□□□□ -0.02
PCDHGB3-201ENST00000576222 AFAP1L1Q8TED9 768 aa14.95□□□□□ -0.02
PCDHGB3-201ENST00000576222 DHX58Q96C10 678 aa14.95□□□□□ -0.02
PCDHGB3-201ENST00000576222 NCOA5Q9HCD5 579 aaKnown RBP14.95□□□□□ -0.02
PCDHGB3-201ENST00000576222 ZSWIM6Q9HCJ5 1215 aa14.95□□□□□ -0.02
PCDHGB3-201ENST00000576222 ZC3H6P61129 1189 aaKnown RBP14.95□□□□□ -0.02
PCDHGB3-201ENST00000576222 TUBB2AQ13885 445 aa14.95□□□□□ -0.02
PCDHGB3-201ENST00000576222 ANO1Q5XXA6 986 aa14.95□□□□□ -0.02
PCDHGB3-201ENST00000576222 RASEFQ8IZ41 740 aa14.95□□□□□ -0.02
PCDHGB3-201ENST00000576222 EYA1Q99502 592 aa14.95□□□□□ -0.02
PCDHGB3-201ENST00000576222 TUBB2BQ9BVA1 445 aa14.95□□□□□ -0.02
PCDHGB3-201ENST00000576222 TCEAL9Q9UHQ7 104 aa14.95□□□□□ -0.02
PCDHGB3-201ENST00000576222 KIAA0232Q92628 1395 aa14.95□□□□□ -0.02
PCDHGB3-201ENST00000576222 ATF3P18847 181 aa14.94□□□□□ -0.02
PCDHGB3-201ENST00000576222 KRT83P78385 493 aa14.94□□□□□ -0.02
PCDHGB3-201ENST00000576222 PTH1RQ03431 593 aa14.94□□□□□ -0.02
PCDHGB3-201ENST00000576222 CCDC96Q2M329 555 aa14.94□□□□□ -0.02
PCDHGB3-201ENST00000576222 TPCN1Q9ULQ1 816 aa14.94□□□□□ -0.02
PCDHGB3-201ENST00000576222 ERVK-7P63135 1459 aa14.94□□□□□ -0.02
PCDHGB3-201ENST00000576222 DNAJC21Q5F1R6 531 aaKnown RBP14.94□□□□□ -0.02
PCDHGB3-201ENST00000576222 CCDC91Q7Z6B0 441 aa14.94□□□□□ -0.02
PCDHGB3-201ENST00000576222 XAGE3Q8WTP9 111 aa14.94□□□□□ -0.02
PCDHGB3-201ENST00000576222 PPM1EQ8WY54 764 aa14.94□□□□□ -0.02
PCDHGB3-201ENST00000576222 DRC1Q96MC2 740 aa14.94□□□□□ -0.02
PCDHGB3-201ENST00000576222 RMND1Q9NWS8 449 aa14.94□□□□□ -0.02
PCDHGB3-201ENST00000576222 RANBP6O60518 1105 aaKnown RBP14.94□□□□□ -0.02
PCDHGB3-201ENST00000576222 NEFHP12036 1026 aa14.94□□□□□ -0.02
PCDHGB3-201ENST00000576222 COPS6Q7L5N1 327 aa14.94□□□□□ -0.02
PCDHGB3-201ENST00000576222 UBA7P41226 1012 aa14.94□□□□□ -0.02
PCDHGB3-201ENST00000576222 LMBR1LQ6UX01 489 aa14.94□□□□□ -0.02
PCDHGB3-201ENST00000576222 CCDC129Q6ZRS4 1044 aa14.94□□□□□ -0.02
PCDHGB3-201ENST00000576222 TACC1O75410 805 aa14.93□□□□□ -0.02
PCDHGB3-201ENST00000576222 BMP15O95972 392 aa14.93□□□□□ -0.02
PCDHGB3-201ENST00000576222 NBPF7P0C2Y1 421 aaPredicted RBP14.93□□□□□ -0.02
PCDHGB3-201ENST00000576222 ZRSR2Q15696 482 aaKnown RBP14.93□□□□□ -0.02
PCDHGB3-201ENST00000576222 MFSD6Q6ZSS7 791 aa14.93□□□□□ -0.02
PCDHGB3-201ENST00000576222 FAM114A1Q8IWE2 563 aa14.93□□□□□ -0.02
PCDHGB3-201ENST00000576222 SEPT11Q9NVA2 429 aaKnown RBP14.93□□□□□ -0.02
PCDHGB3-201ENST00000576222 ATP2C2O75185 946 aa14.93□□□□□ -0.02
PCDHGB3-201ENST00000576222 OTUD7BQ6GQQ9 843 aa14.93□□□□□ -0.02
PCDHGB3-201ENST00000576222 CATIPQ7Z7H3 387 aa14.93□□□□□ -0.02
PCDHGB3-201ENST00000576222 IGSF22Q8N9C0 903 aa14.93□□□□□ -0.02
PCDHGB3-201ENST00000576222 SSH3Q8TE77 659 aa14.93□□□□□ -0.02
PCDHGB3-201ENST00000576222 KIF2CQ99661 725 aa14.93□□□□□ -0.02
PCDHGB3-201ENST00000576222 NAPGQ99747 312 aaPredicted RBP14.93□□□□□ -0.02
PCDHGB3-201ENST00000576222 STAP2Q9UGK3 403 aa14.93□□□□□ -0.02
PCDHGB3-201ENST00000576222 TTC21AQ8NDW8 1320 aa14.93□□□□□ -0.02
PCDHGB3-201ENST00000576222 CCDC194A0A1B0GVG4 234 aa14.93□□□□□ -0.02
PCDHGB3-201ENST00000576222 EFCAB8A8MWE9 144 aa14.93□□□□□ -0.02
PCDHGB3-201ENST00000576222 ZEB2O60315 1214 aa14.93□□□□□ -0.02
PCDHGB3-201ENST00000576222 KIF5AQ12840 1032 aa14.93□□□□□ -0.02
PCDHGB3-201ENST00000576222 TTF1Q15361 905 aaPredicted RBP14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms