RNA–Protein interactions for RNA: ENST00000571688.5

LITAF-209, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-209ENST00000571688 NCAPD2Q15021 1401 aa19.53■□□□□ 0.72
LITAF-209ENST00000571688 A0A1W2PQ27 194 aa19.53■□□□□ 0.72
LITAF-209ENST00000571688 A0A1W2PQ64 194 aa19.53■□□□□ 0.72
LITAF-209ENST00000571688 A0A1W2PQD8 194 aa19.53■□□□□ 0.72
LITAF-209ENST00000571688 FOSBP53539 338 aa19.53■□□□□ 0.72
LITAF-209ENST00000571688 ADALQ6DHV7 355 aa19.53■□□□□ 0.72
LITAF-209ENST00000571688 TMX1Q9H3N1 280 aa19.53■□□□□ 0.72
LITAF-209ENST00000571688 EFCC1Q9HA90 598 aa19.53■□□□□ 0.72
LITAF-209ENST00000571688 C9orf78Q9NZ63 289 aaPredicted RBP19.53■□□□□ 0.72
LITAF-209ENST00000571688 PTPDC1A2A3K4 754 aa19.52■□□□□ 0.72
LITAF-209ENST00000571688 CHMP4AQ9BY43 222 aa19.52■□□□□ 0.72
LITAF-209ENST00000571688 GPR161Q8N6U8 529 aaKnown RBP19.52■□□□□ 0.71
LITAF-209ENST00000571688 PSD3Q9NYI0 1048 aa19.52■□□□□ 0.71
LITAF-209ENST00000571688 MYO1CO00159 1063 aa19.51■□□□□ 0.71
LITAF-209ENST00000571688 ANXA1P04083 346 aa19.51■□□□□ 0.71
LITAF-209ENST00000571688 NDUFA8P51970 172 aa19.51■□□□□ 0.71
LITAF-209ENST00000571688 G3BP1Q13283 466 aaKnown RBP eCLIP19.51■□□□□ 0.71
LITAF-209ENST00000571688 ZRSR1Q15695 479 aaKnown RBP19.51■□□□□ 0.71
LITAF-209ENST00000571688 HDAC5Q9UQL6 1122 aa19.51■□□□□ 0.71
LITAF-209ENST00000571688 SALL1Q9NSC2 1324 aa19.51■□□□□ 0.71
LITAF-209ENST00000571688 A0A1B0GVL5 298 aa19.51■□□□□ 0.71
LITAF-209ENST00000571688 NLRP12P59046 1061 aa19.51■□□□□ 0.71
LITAF-209ENST00000571688 FANCCQ00597 558 aa19.51■□□□□ 0.71
LITAF-209ENST00000571688 FCHSD1Q86WN1 690 aa19.51■□□□□ 0.71
LITAF-209ENST00000571688 CCDC191Q8NCU4 936 aa19.51■□□□□ 0.71
LITAF-209ENST00000571688 CWC15Q9P013 229 aaKnown RBP19.51■□□□□ 0.71
LITAF-209ENST00000571688 U3KPZ7 1027 aaPredicted RBP19.51■□□□□ 0.71
LITAF-209ENST00000571688 MRC1P22897 1456 aa19.5■□□□□ 0.71
LITAF-209ENST00000571688 CYP21A2P08686 494 aa19.5■□□□□ 0.71
LITAF-209ENST00000571688 LRRC2Q9BYS8 371 aa19.5■□□□□ 0.71
LITAF-209ENST00000571688 EPC1Q9H2F5 836 aa19.5■□□□□ 0.71
LITAF-209ENST00000571688 RTEL1Q9NZ71 1219 aa19.5■□□□□ 0.71
LITAF-209ENST00000571688 FBXO18Q8NFZ0 1043 aa19.5■□□□□ 0.71
LITAF-209ENST00000571688 GOLGA5Q8TBA6 731 aa19.5■□□□□ 0.71
LITAF-209ENST00000571688 EXOC4Q96A65 974 aa19.5■□□□□ 0.71
LITAF-209ENST00000571688 PIK3C2AO00443 1686 aa19.49■□□□□ 0.71
LITAF-209ENST00000571688 MPHOSPH8Q99549 860 aa19.49■□□□□ 0.71
LITAF-209ENST00000571688 ATG3Q9NT62 314 aa19.49■□□□□ 0.71
LITAF-209ENST00000571688 RSPH14Q9UHP6 348 aa19.49■□□□□ 0.71
LITAF-209ENST00000571688 LCMT1Q9UIC8 334 aa19.49■□□□□ 0.71
LITAF-209ENST00000571688 IKBKBO14920 756 aa19.49■□□□□ 0.71
LITAF-209ENST00000571688 RSRC2Q7L4I2 434 aaKnown RBP19.49■□□□□ 0.71
LITAF-209ENST00000571688 CCDC34Q96HJ3 373 aa19.49■□□□□ 0.71
LITAF-209ENST00000571688 AK7Q96M32 723 aa19.49■□□□□ 0.71
LITAF-209ENST00000571688 FUT8Q9BYC5 575 aa19.49■□□□□ 0.71
LITAF-209ENST00000571688 HSD3B7Q9H2F3 369 aa19.49■□□□□ 0.71
LITAF-209ENST00000571688 MAP3K2Q9Y2U5 619 aa19.49■□□□□ 0.71
LITAF-209ENST00000571688 AGLP35573 1532 aa19.48■□□□□ 0.71
LITAF-209ENST00000571688 VWA3AA6NCI4 1184 aa19.48■□□□□ 0.71
LITAF-209ENST00000571688 IQUBQ8NA54 791 aa19.48■□□□□ 0.71
LITAF-209ENST00000571688 KAZALD1Q96I82 304 aa19.48■□□□□ 0.71
LITAF-209ENST00000571688 ARFGAP3Q9NP61 516 aa19.48■□□□□ 0.71
LITAF-209ENST00000571688 MAP3K9P80192 1104 aa19.48■□□□□ 0.71
LITAF-209ENST00000571688 EDC3Q96F86 508 aaKnown RBP19.48■□□□□ 0.71
LITAF-209ENST00000571688 SUCLG2Q96I99 432 aa19.48■□□□□ 0.71
LITAF-209ENST00000571688 FMNL2Q96PY5 1086 aa19.48■□□□□ 0.71
LITAF-209ENST00000571688 SIL1Q9H173 461 aa19.48■□□□□ 0.71
LITAF-209ENST00000571688 DIP2AQ14689 1571 aa19.48■□□□□ 0.71
LITAF-209ENST00000571688 RFX7Q2KHR2 1363 aa19.47■□□□□ 0.71
LITAF-209ENST00000571688 TSPOAP1O95153 1857 aa19.47■□□□□ 0.71
LITAF-209ENST00000571688 ZSCAN12O43309 604 aa19.47■□□□□ 0.71
LITAF-209ENST00000571688 STOX1Q6ZVD7 989 aa19.47■□□□□ 0.71
LITAF-209ENST00000571688 LINC00301Q8NCQ3 95 aa19.47■□□□□ 0.71
LITAF-209ENST00000571688 UTP14AQ9BVJ6 771 aaKnown RBP19.47■□□□□ 0.71
LITAF-209ENST00000571688 ZNF609O15014 1411 aa19.47■□□□□ 0.71
LITAF-209ENST00000571688 TRIM66O15016 1216 aa19.47■□□□□ 0.71
LITAF-209ENST00000571688 SLC3A2P08195 630 aaKnown RBP19.47■□□□□ 0.71
LITAF-209ENST00000571688 LMOD1P29536 600 aaPredicted RBP19.47■□□□□ 0.71
LITAF-209ENST00000571688 HOXC9P31274 260 aa19.47■□□□□ 0.71
LITAF-209ENST00000571688 SRLQ86TD4 932 aa19.47■□□□□ 0.71
LITAF-209ENST00000571688 SEC62Q99442 399 aaKnown RBP19.47■□□□□ 0.71
LITAF-209ENST00000571688 AGXT2Q9BYV1 514 aa19.47■□□□□ 0.71
LITAF-209ENST00000571688 ADAM21Q9UKJ8 722 aa19.47■□□□□ 0.71
LITAF-209ENST00000571688 SLIT1O75093 1534 aa19.46■□□□□ 0.71
LITAF-209ENST00000571688 TNNT3P45378 269 aaPredicted RBP19.46■□□□□ 0.71
LITAF-209ENST00000571688 NOP2P46087 812 aaKnown RBP19.46■□□□□ 0.71
LITAF-209ENST00000571688 CWF19L2Q2TBE0 894 aaKnown RBP19.46■□□□□ 0.71
LITAF-209ENST00000571688 C10orf67Q8IYJ2 551 aa19.46■□□□□ 0.71
LITAF-209ENST00000571688 BICC1Q9H694 974 aaKnown RBP19.46■□□□□ 0.71
LITAF-209ENST00000571688 MRFAP1Q9Y605 127 aa19.46■□□□□ 0.71
LITAF-209ENST00000571688 BIN1O00499 593 aa19.46■□□□□ 0.71
LITAF-209ENST00000571688 HMGB1P09429 215 aaKnown RBP19.46■□□□□ 0.71
LITAF-209ENST00000571688 ATP1A3P13637 1013 aa19.46■□□□□ 0.71
LITAF-209ENST00000571688 GUCY1B3Q02153 619 aa19.46■□□□□ 0.71
LITAF-209ENST00000571688 APOBRQ0VD83 1088 aa19.46■□□□□ 0.71
LITAF-209ENST00000571688 UTYO14607 1347 aa19.46■□□□□ 0.71
LITAF-209ENST00000571688 CASQ1P31415 396 aa19.45■□□□□ 0.7
LITAF-209ENST00000571688 PPP2R3AQ06190 1150 aa19.45■□□□□ 0.7
LITAF-209ENST00000571688 DHX32Q7L7V1 743 aaKnown RBP19.45■□□□□ 0.7
LITAF-209ENST00000571688 TMEM139Q8IV31 216 aa19.45■□□□□ 0.7
LITAF-209ENST00000571688 RABGGTAQ92696 567 aa19.45■□□□□ 0.7
LITAF-209ENST00000571688 PARD6BQ9BYG5 372 aa19.45■□□□□ 0.7
LITAF-209ENST00000571688 KCNQ3O43525 872 aa19.45■□□□□ 0.7
LITAF-209ENST00000571688 KSR2Q6VAB6 950 aa19.45■□□□□ 0.7
LITAF-209ENST00000571688 CCDC129Q6ZRS4 1044 aa19.45■□□□□ 0.7
LITAF-209ENST00000571688 DPF2Q92785 391 aa19.45■□□□□ 0.7
LITAF-209ENST00000571688 DBF4Q9UBU7 674 aaPredicted RBP19.45■□□□□ 0.7
LITAF-209ENST00000571688 PPP2R2CQ9Y2T4 447 aa19.45■□□□□ 0.7
LITAF-209ENST00000571688 CARMIL3Q8ND23 1372 aa19.45■□□□□ 0.7
LITAF-209ENST00000571688 CBFA2T2O43439 604 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms