RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 ANO10Q9NW15 660 aa20.44■□□□□ 0.86
SCARF1-205ENST00000571272 PAG1Q9NWQ8 432 aa20.44■□□□□ 0.86
SCARF1-205ENST00000571272 E7EWF7 191 aa20.43■□□□□ 0.86
SCARF1-205ENST00000571272 EXOSC10Q01780 885 aaKnown RBP20.43■□□□□ 0.86
SCARF1-205ENST00000571272 PTPN14Q15678 1187 aa20.43■□□□□ 0.86
SCARF1-205ENST00000571272 OTUD7BQ6GQQ9 843 aa20.43■□□□□ 0.86
SCARF1-205ENST00000571272 GTPBP4Q9BZE4 634 aaKnown RBP20.43■□□□□ 0.86
SCARF1-205ENST00000571272 TTC5Q8N0Z6 440 aa20.43■□□□□ 0.86
SCARF1-205ENST00000571272 CTNNA3Q9UI47 895 aa20.43■□□□□ 0.86
SCARF1-205ENST00000571272 A0A1B0GVL5 298 aa20.42■□□□□ 0.86
SCARF1-205ENST00000571272 SDF4Q9BRK5 362 aa20.42■□□□□ 0.86
SCARF1-205ENST00000571272 ERBB3P21860 1342 aa20.42■□□□□ 0.86
SCARF1-205ENST00000571272 SH3TC1Q8TE82 1336 aa20.42■□□□□ 0.86
SCARF1-205ENST00000571272 KDM6AO15550 1401 aaPredicted RBP20.42■□□□□ 0.86
SCARF1-205ENST00000571272 SNRPA1P09661 255 aaKnown RBP20.42■□□□□ 0.86
SCARF1-205ENST00000571272 PDIA3P30101 505 aaKnown RBP20.42■□□□□ 0.86
SCARF1-205ENST00000571272 RBM6P78332 1123 aaKnown RBP20.42■□□□□ 0.86
SCARF1-205ENST00000571272 TTLL5Q6EMB2 1281 aa20.42■□□□□ 0.86
SCARF1-205ENST00000571272 FEZ1Q99689 392 aa20.42■□□□□ 0.86
SCARF1-205ENST00000571272 GPHNQ9NQX3 736 aaPredicted RBP20.42■□□□□ 0.86
SCARF1-205ENST00000571272 HSPD1P10809 573 aaKnown RBP20.41■□□□□ 0.86
SCARF1-205ENST00000571272 PHKG2P15735 406 aa20.41■□□□□ 0.86
SCARF1-205ENST00000571272 SYCP1Q15431 976 aa20.41■□□□□ 0.86
SCARF1-205ENST00000571272 CEP57L1Q8IYX8 460 aa20.41■□□□□ 0.86
SCARF1-205ENST00000571272 PCDHA7Q9UN72 937 aa20.41■□□□□ 0.86
SCARF1-205ENST00000571272 C5P01031 1676 aa20.41■□□□□ 0.86
SCARF1-205ENST00000571272 SIPA1L3O60292 1781 aaPredicted RBP20.41■□□□□ 0.86
SCARF1-205ENST00000571272 RFX7Q2KHR2 1363 aa20.41■□□□□ 0.86
SCARF1-205ENST00000571272 CCZ1BP86790 482 aa20.41■□□□□ 0.86
SCARF1-205ENST00000571272 CCZ1P86791 482 aaPredicted RBP20.41■□□□□ 0.86
SCARF1-205ENST00000571272 ZNF215Q9UL58 517 aaPredicted RBP20.41■□□□□ 0.86
SCARF1-205ENST00000571272 NEMFO60524 1076 aa20.4■□□□□ 0.86
SCARF1-205ENST00000571272 ANKLE2Q86XL3 938 aa20.4■□□□□ 0.86
SCARF1-205ENST00000571272 OGFRQ9NZT2 677 aa20.4■□□□□ 0.86
SCARF1-205ENST00000571272 POLR3DP05423 398 aaPredicted RBP20.4■□□□□ 0.86
SCARF1-205ENST00000571272 DSCC1Q9BVC3 393 aa20.4■□□□□ 0.86
SCARF1-205ENST00000571272 HELLSQ9NRZ9 838 aa20.4■□□□□ 0.86
SCARF1-205ENST00000571272 CGNQ9P2M7 1197 aaKnown RBP20.4■□□□□ 0.86
SCARF1-205ENST00000571272 NYAP1Q6ZVC0 841 aa20.39■□□□□ 0.85
SCARF1-205ENST00000571272 PHRF1Q9P1Y6 1649 aaKnown RBP20.39■□□□□ 0.85
SCARF1-205ENST00000571272 SALL1Q9NSC2 1324 aa20.39■□□□□ 0.85
SCARF1-205ENST00000571272 FDPSP14324 419 aaKnown RBP20.39■□□□□ 0.85
SCARF1-205ENST00000571272 ZMYM1Q5SVZ6 1142 aa20.39■□□□□ 0.85
SCARF1-205ENST00000571272 MRPS27Q92552 414 aaKnown RBP20.39■□□□□ 0.85
SCARF1-205ENST00000571272 AGXT2Q9BYV1 514 aa20.39■□□□□ 0.85
SCARF1-205ENST00000571272 CARMIL3Q8ND23 1372 aa20.38■□□□□ 0.85
SCARF1-205ENST00000571272 TATP17735 454 aaPredicted RBP20.38■□□□□ 0.85
SCARF1-205ENST00000571272 NDUFA8P51970 172 aa20.38■□□□□ 0.85
SCARF1-205ENST00000571272 CASP7P55210 303 aa20.38■□□□□ 0.85
SCARF1-205ENST00000571272 ATG9AQ7Z3C6 839 aa20.38■□□□□ 0.85
SCARF1-205ENST00000571272 KRT28Q7Z3Y7 464 aa20.38■□□□□ 0.85
SCARF1-205ENST00000571272 RAB11FIP4Q86YS3 637 aa20.38■□□□□ 0.85
SCARF1-205ENST00000571272 FMR1NBQ8N0W7 255 aaPredicted RBP20.38■□□□□ 0.85
SCARF1-205ENST00000571272 ZNF594Q96JF6 807 aaPredicted RBP20.38■□□□□ 0.85
SCARF1-205ENST00000571272 FMNL2Q96PY5 1086 aa20.38■□□□□ 0.85
SCARF1-205ENST00000571272 SF3A1Q15459 793 aaKnown RBP20.38■□□□□ 0.85
SCARF1-205ENST00000571272 CCAR2Q8N163 923 aaKnown RBP20.38■□□□□ 0.85
SCARF1-205ENST00000571272 LAMA4Q16363 1823 aa20.38■□□□□ 0.85
SCARF1-205ENST00000571272 MAST3O60307 1309 aa20.38■□□□□ 0.85
SCARF1-205ENST00000571272 HAND2P61296 217 aa20.37■□□□□ 0.85
SCARF1-205ENST00000571272 SYTL4Q96C24 671 aaPredicted RBP20.37■□□□□ 0.85
SCARF1-205ENST00000571272 CLIC4Q9Y696 253 aa20.37■□□□□ 0.85
SCARF1-205ENST00000571272 FER1L4A9Z1Z3 1794 aa20.37■□□□□ 0.85
SCARF1-205ENST00000571272 BIN1O00499 593 aa20.37■□□□□ 0.85
SCARF1-205ENST00000571272 FOXO4P98177 505 aa20.37■□□□□ 0.85
SCARF1-205ENST00000571272 DPCR1Q3MIW9 517 aa20.37■□□□□ 0.85
SCARF1-205ENST00000571272 LRRC24Q50LG9 513 aa20.37■□□□□ 0.85
SCARF1-205ENST00000571272 NAT10Q9H0A0 1025 aaKnown RBP20.37■□□□□ 0.85
SCARF1-205ENST00000571272 GJB4Q9NTQ9 266 aa20.37■□□□□ 0.85
SCARF1-205ENST00000571272 IFIT1P09914 478 aaKnown RBP20.36■□□□□ 0.85
SCARF1-205ENST00000571272 STK38Q15208 465 aa20.36■□□□□ 0.85
SCARF1-205ENST00000571272 ATL3Q6DD88 541 aa20.36■□□□□ 0.85
SCARF1-205ENST00000571272 NBPF11Q86T75 865 aa20.36■□□□□ 0.85
SCARF1-205ENST00000571272 ZNF274Q96GC6 653 aaPredicted RBP20.36■□□□□ 0.85
SCARF1-205ENST00000571272 TAOK2Q9UL54 1235 aa20.36■□□□□ 0.85
SCARF1-205ENST00000571272 M0R2C6 588 aa20.36■□□□□ 0.85
SCARF1-205ENST00000571272 NPHP1O15259 732 aa20.36■□□□□ 0.85
SCARF1-205ENST00000571272 ZRSR1Q15695 479 aaKnown RBP20.36■□□□□ 0.85
SCARF1-205ENST00000571272 IFNL2Q8IZJ0 200 aa20.36■□□□□ 0.85
SCARF1-205ENST00000571272 PALLDQ8WX93 1383 aa20.36■□□□□ 0.85
SCARF1-205ENST00000571272 SMC2O95347 1197 aa20.36■□□□□ 0.85
SCARF1-205ENST00000571272 ADALQ6DHV7 355 aa20.36■□□□□ 0.85
SCARF1-205ENST00000571272 DDX41Q9UJV9 622 aaKnown RBP20.36■□□□□ 0.85
SCARF1-205ENST00000571272 CSB-PGBD3P0DP91 1061 aa20.35■□□□□ 0.85
SCARF1-205ENST00000571272 RGPD5Q99666 1765 aa20.35■□□□□ 0.85
SCARF1-205ENST00000571272 RNF113AO15541 343 aaKnown RBP20.35■□□□□ 0.85
SCARF1-205ENST00000571272 FKBP4Q02790 459 aaKnown RBP eCLIP20.35■□□□□ 0.85
SCARF1-205ENST00000571272 PLBD2Q8NHP8 589 aa20.35■□□□□ 0.85
SCARF1-205ENST00000571272 RTEL1Q9NZ71 1219 aa20.35■□□□□ 0.85
SCARF1-205ENST00000571272 SLIT3O75094 1523 aa20.34■□□□□ 0.85
SCARF1-205ENST00000571272 LINC00301Q8NCQ3 95 aa20.34■□□□□ 0.85
SCARF1-205ENST00000571272 KIAA1468Q9P260 1216 aa20.34■□□□□ 0.85
SCARF1-205ENST00000571272 AFDNP55196 1824 aaKnown RBP20.34■□□□□ 0.85
SCARF1-205ENST00000571272 MYH15Q9Y2K3 1946 aa20.34■□□□□ 0.85
SCARF1-205ENST00000571272 KMT5BQ4FZB7 885 aa20.34■□□□□ 0.85
SCARF1-205ENST00000571272 KIF18AQ8NI77 898 aa20.34■□□□□ 0.85
SCARF1-205ENST00000571272 OSBP2Q969R2 916 aa20.34■□□□□ 0.85
SCARF1-205ENST00000571272 XPO4Q9C0E2 1151 aaKnown RBP20.34■□□□□ 0.85
SCARF1-205ENST00000571272 IFNKQ9P0W0 207 aa20.34■□□□□ 0.85
SCARF1-205ENST00000571272 CYP27B1O15528 508 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms