RNA–Protein interactions for RNA: ENST00000568230.5

KNOP1-205, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KNOP1, Length 1,311 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-205ENST00000568230 RSBN1LQ6PCB5 846 aaPredicted RBP21.5■■□□□ 1.03
KNOP1-205ENST00000568230 HELBQ8NG08 1087 aaPredicted RBP21.5■■□□□ 1.03
KNOP1-205ENST00000568230 USP17L3A6NCW0 530 aa21.49■■□□□ 1.03
KNOP1-205ENST00000568230 USP17L4A6NCW7 530 aa21.49■■□□□ 1.03
KNOP1-205ENST00000568230 SNAP23O00161 211 aa21.49■■□□□ 1.03
KNOP1-205ENST00000568230 UBTFL1P0CB47 393 aaPredicted RBP21.49■■□□□ 1.03
KNOP1-205ENST00000568230 HIRAP54198 1017 aaPredicted RBP21.49■■□□□ 1.03
KNOP1-205ENST00000568230 INTS3Q68E01 1043 aaKnown RBP21.49■■□□□ 1.03
KNOP1-205ENST00000568230 USP17L1Q7RTZ2 530 aa21.49■■□□□ 1.03
KNOP1-205ENST00000568230 AGBL3Q8NEM8 1001 aa21.49■■□□□ 1.03
KNOP1-205ENST00000568230 CREBZFQ9NS37 354 aa21.49■■□□□ 1.03
KNOP1-205ENST00000568230 ATF7IPQ6VMQ6 1270 aa21.48■■□□□ 1.03
KNOP1-205ENST00000568230 ZC3H15Q8WU90 426 aaKnown RBP21.48■■□□□ 1.03
KNOP1-205ENST00000568230 GMLQ99445 158 aa21.48■■□□□ 1.03
KNOP1-205ENST00000568230 PUS3Q9BZE2 481 aaKnown RBP21.48■■□□□ 1.03
KNOP1-205ENST00000568230 PGAP2Q9UHJ9 254 aa21.48■■□□□ 1.03
KNOP1-205ENST00000568230 RIPOR2Q9Y4F9 1068 aa21.48■■□□□ 1.03
KNOP1-205ENST00000568230 KLRG1Q96E93 195 aa21.47■■□□□ 1.03
KNOP1-205ENST00000568230 ZNF280AP59817 542 aaPredicted RBP21.46■■□□□ 1.03
KNOP1-205ENST00000568230 DACT2Q5SW24 774 aa21.46■■□□□ 1.03
KNOP1-205ENST00000568230 STRIP1Q5VSL9 837 aa21.46■■□□□ 1.03
KNOP1-205ENST00000568230 SAMD7Q7Z3H4 446 aa21.46■■□□□ 1.03
KNOP1-205ENST00000568230 FRAT1Q92837 279 aaPredicted RBP21.46■■□□□ 1.03
KNOP1-205ENST00000568230 MEIS3Q99687 375 aa21.46■■□□□ 1.03
KNOP1-205ENST00000568230 MROH5Q6ZUA9 1318 aa21.45■■□□□ 1.03
KNOP1-205ENST00000568230 EGFRP00533 1210 aa21.45■■□□□ 1.02
KNOP1-205ENST00000568230 RFX5P48382 616 aaPredicted RBP21.44■■□□□ 1.02
KNOP1-205ENST00000568230 UBE4AQ14139 1066 aa21.44■■□□□ 1.02
KNOP1-205ENST00000568230 TBC1D10BQ4KMP7 808 aaPredicted RBP21.44■■□□□ 1.02
KNOP1-205ENST00000568230 CD209Q9NNX6 404 aa21.44■■□□□ 1.02
KNOP1-205ENST00000568230 HDAC5Q9UQL6 1122 aa21.44■■□□□ 1.02
KNOP1-205ENST00000568230 TNNQ9UQP3 1299 aa21.44■■□□□ 1.02
KNOP1-205ENST00000568230 LRRFIP2Q9Y608 721 aaKnown RBP21.44■■□□□ 1.02
KNOP1-205ENST00000568230 TRPM7Q96QT4 1865 aa21.44■■□□□ 1.02
KNOP1-205ENST00000568230 MYO3BQ8WXR4 1341 aa21.44■■□□□ 1.02
KNOP1-205ENST00000568230 TMEM88BA6NKF7 163 aa21.43■■□□□ 1.02
KNOP1-205ENST00000568230 PLIN1O60240 522 aa21.43■■□□□ 1.02
KNOP1-205ENST00000568230 LRRC24Q50LG9 513 aa21.43■■□□□ 1.02
KNOP1-205ENST00000568230 ZKSCAN2Q63HK3 967 aa21.43■■□□□ 1.02
KNOP1-205ENST00000568230 ZNF804AQ7Z570 1209 aa21.43■■□□□ 1.02
KNOP1-205ENST00000568230 KLHDC4Q8TBB5 520 aa21.43■■□□□ 1.02
KNOP1-205ENST00000568230 USP17L8P0C7I0 530 aa21.42■■□□□ 1.02
KNOP1-205ENST00000568230 IL1R1P14778 569 aa21.42■■□□□ 1.02
KNOP1-205ENST00000568230 KIF4BQ2VIQ3 1234 aa21.42■■□□□ 1.02
KNOP1-205ENST00000568230 VGLL2Q8N8G2 317 aa21.42■■□□□ 1.02
KNOP1-205ENST00000568230 TRAF5O00463 557 aa21.41■■□□□ 1.02
KNOP1-205ENST00000568230 GNAI3P08754 354 aa21.41■■□□□ 1.02
KNOP1-205ENST00000568230 PTPN12Q05209 780 aaKnown RBP21.41■■□□□ 1.02
KNOP1-205ENST00000568230 METTL24Q5JXM2 366 aa21.41■■□□□ 1.02
KNOP1-205ENST00000568230 MXD3Q9BW11 206 aa21.41■■□□□ 1.02
KNOP1-205ENST00000568230 TTLL5Q6EMB2 1281 aa21.4■■□□□ 1.02
KNOP1-205ENST00000568230 JMYQ8N9B5 988 aa21.4■■□□□ 1.02
KNOP1-205ENST00000568230 FBXW7Q969H0 707 aa21.4■■□□□ 1.02
KNOP1-205ENST00000568230 CLUAP1Q96AJ1 413 aa21.4■■□□□ 1.02
KNOP1-205ENST00000568230 GLIS2Q9BZE0 524 aaPredicted RBP21.4■■□□□ 1.02
KNOP1-205ENST00000568230 EYA2O00167 538 aa21.39■■□□□ 1.01
KNOP1-205ENST00000568230 PDE8BO95263 885 aa21.39■■□□□ 1.01
KNOP1-205ENST00000568230 GTF2IP78347 998 aa21.39■■□□□ 1.01
KNOP1-205ENST00000568230 FMR1Q06787 632 aaKnown RBP eCLIP21.39■■□□□ 1.01
KNOP1-205ENST00000568230 MYOZ2Q9NPC6 264 aa21.39■■□□□ 1.01
KNOP1-205ENST00000568230 CNTNAP1P78357 1384 aa21.39■■□□□ 1.01
KNOP1-205ENST00000568230 POLR2AP24928 1970 aaKnown RBP21.38■■□□□ 1.01
KNOP1-205ENST00000568230 RBM26Q5T8P6 1007 aaKnown RBP21.38■■□□□ 1.01
KNOP1-205ENST00000568230 CDC37L1Q7L3B6 337 aa21.38■■□□□ 1.01
KNOP1-205ENST00000568230 TMEM57Q8N5G2 664 aa21.38■■□□□ 1.01
KNOP1-205ENST00000568230 FBXO3Q9UK99 471 aa21.38■■□□□ 1.01
KNOP1-205ENST00000568230 CIAO1O76071 339 aa21.37■■□□□ 1.01
KNOP1-205ENST00000568230 MMP14P50281 582 aa21.37■■□□□ 1.01
KNOP1-205ENST00000568230 MTX1Q13505 466 aa21.37■■□□□ 1.01
KNOP1-205ENST00000568230 ATG9AQ7Z3C6 839 aa21.37■■□□□ 1.01
KNOP1-205ENST00000568230 FAM84BQ96KN1 310 aaPredicted RBP21.37■■□□□ 1.01
KNOP1-205ENST00000568230 ARAP2Q8WZ64 1704 aa21.37■■□□□ 1.01
KNOP1-205ENST00000568230 GYG1P46976 350 aa21.36■■□□□ 1.01
KNOP1-205ENST00000568230 OGFOD1Q8N543 542 aa21.36■■□□□ 1.01
KNOP1-205ENST00000568230 GGA3Q9NZ52 723 aa21.36■■□□□ 1.01
KNOP1-205ENST00000568230 RASSF10A6NK89 507 aa21.35■■□□□ 1.01
KNOP1-205ENST00000568230 HIBADHP31937 336 aaKnown RBP21.35■■□□□ 1.01
KNOP1-205ENST00000568230 FKBP1AP62942 108 aaKnown RBP21.35■■□□□ 1.01
KNOP1-205ENST00000568230 PUM3Q15397 648 aaKnown RBP21.35■■□□□ 1.01
KNOP1-205ENST00000568230 CST9Q5W186 159 aa21.35■■□□□ 1.01
KNOP1-205ENST00000568230 KRT26Q7Z3Y9 468 aa21.35■■□□□ 1.01
KNOP1-205ENST00000568230 CERS5Q8N5B7 392 aa21.35■■□□□ 1.01
KNOP1-205ENST00000568230 TDRD7Q8NHU6 1098 aaKnown RBP21.35■■□□□ 1.01
KNOP1-205ENST00000568230 COPRSQ9NQ92 184 aa21.35■■□□□ 1.01
KNOP1-205ENST00000568230 MKRN1Q9UHC7 482 aaKnown RBP21.35■■□□□ 1.01
KNOP1-205ENST00000568230 ASTN2O75129 1339 aaPredicted RBP21.35■■□□□ 1.01
KNOP1-205ENST00000568230 FAM205AQ6ZU69 1335 aa21.35■■□□□ 1.01
KNOP1-205ENST00000568230 SASH1O94885 1247 aa21.34■■□□□ 1.01
KNOP1-205ENST00000568230 GNAI2P04899 355 aa21.34■■□□□ 1.01
KNOP1-205ENST00000568230 FGFR2P21802 821 aa21.34■■□□□ 1.01
KNOP1-205ENST00000568230 SCARF1Q14162 830 aa21.34■■□□□ 1.01
KNOP1-205ENST00000568230 FBXO33Q7Z6M2 555 aa21.34■■□□□ 1.01
KNOP1-205ENST00000568230 KIAA0825Q8IV33 1275 aa21.34■■□□□ 1.01
KNOP1-205ENST00000568230 FTSJ3Q8IY81 847 aaKnown RBP21.34■■□□□ 1.01
KNOP1-205ENST00000568230 DCPSQ96C86 337 aaKnown RBP21.34■■□□□ 1.01
KNOP1-205ENST00000568230 PITPNM2Q9BZ72 1349 aa21.33■■□□□ 1.01
KNOP1-205ENST00000568230 CELF2O95319 508 aaKnown RBP21.33■■□□□ 1.01
KNOP1-205ENST00000568230 USP48Q86UV5 1035 aa21.33■■□□□ 1.01
KNOP1-205ENST00000568230 DZIP1LQ8IYY4 767 aaKnown RBP21.33■■□□□ 1.01
KNOP1-205ENST00000568230 SIL1Q9H173 461 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms