RNA–Protein interactions for RNA: ENST00000567060.5

CLN6-208, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 945 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-208ENST00000567060 VPS33BQ9H267 617 aa20.78■□□□□ 0.92
CLN6-208ENST00000567060 COPRSQ9NQ92 184 aa20.78■□□□□ 0.92
CLN6-208ENST00000567060 PODXL2Q9NZ53 605 aa20.78■□□□□ 0.92
CLN6-208ENST00000567060 CIAO1O76071 339 aa20.77■□□□□ 0.92
CLN6-208ENST00000567060 RFX5P48382 616 aaPredicted RBP20.77■□□□□ 0.92
CLN6-208ENST00000567060 CEP85Q6P2H3 762 aa20.77■□□□□ 0.92
CLN6-208ENST00000567060 LDHAL6AQ6ZMR3 332 aa20.77■□□□□ 0.92
CLN6-208ENST00000567060 SSH3Q8TE77 659 aa20.77■□□□□ 0.92
CLN6-208ENST00000567060 PTPN12Q05209 780 aaKnown RBP20.76■□□□□ 0.91
CLN6-208ENST00000567060 POLA2Q14181 598 aa20.76■□□□□ 0.91
CLN6-208ENST00000567060 CRBNQ96SW2 442 aa20.76■□□□□ 0.91
CLN6-208ENST00000567060 RTFDC1Q9BY42 306 aaPredicted RBP20.76■□□□□ 0.91
CLN6-208ENST00000567060 TLL2Q9Y6L7 1015 aa20.76■□□□□ 0.91
CLN6-208ENST00000567060 ECE1P42892 770 aa20.75■□□□□ 0.91
CLN6-208ENST00000567060 RGS19P49795 217 aa20.75■□□□□ 0.91
CLN6-208ENST00000567060 GRM1Q13255 1194 aa20.75■□□□□ 0.91
CLN6-208ENST00000567060 MPNDQ8N594 471 aa20.75■□□□□ 0.91
CLN6-208ENST00000567060 CNNM1Q9NRU3 951 aa20.75■□□□□ 0.91
CLN6-208ENST00000567060 MINPP1Q9UNW1 487 aa20.75■□□□□ 0.91
CLN6-208ENST00000567060 XDHP47989 1333 aa20.75■□□□□ 0.91
CLN6-208ENST00000567060 MROH5Q6ZUA9 1318 aa20.75■□□□□ 0.91
CLN6-208ENST00000567060 THSD7BQ9C0I4 1608 aa20.75■□□□□ 0.91
CLN6-208ENST00000567060 EYA2O00167 538 aa20.74■□□□□ 0.91
CLN6-208ENST00000567060 AOC2O75106 756 aa20.74■□□□□ 0.91
CLN6-208ENST00000567060 PAXIP1Q6ZW49 1069 aaPredicted RBP20.74■□□□□ 0.91
CLN6-208ENST00000567060 CCDC85CA6NKD9 419 aa20.73■□□□□ 0.91
CLN6-208ENST00000567060 DPP8Q6V1X1 898 aaPredicted RBP20.73■□□□□ 0.91
CLN6-208ENST00000567060 C1orf115Q9H7X2 142 aa20.73■□□□□ 0.91
CLN6-208ENST00000567060 GPRC5DQ9NZD1 345 aa20.73■□□□□ 0.91
CLN6-208ENST00000567060 TSKSQ9UJT2 592 aa20.73■□□□□ 0.91
CLN6-208ENST00000567060 LEMD3Q9Y2U8 911 aa20.73■□□□□ 0.91
CLN6-208ENST00000567060 RIPOR2Q9Y4F9 1068 aa20.73■□□□□ 0.91
CLN6-208ENST00000567060 SPEF2Q9C093 1822 aa20.73■□□□□ 0.91
CLN6-208ENST00000567060 COL4A1P02462 1669 aa20.73■□□□□ 0.91
CLN6-208ENST00000567060 PNMA6EA0A0J9YXQ4 647 aa20.72■□□□□ 0.91
CLN6-208ENST00000567060 ATP2B4P23634 1241 aa20.72■□□□□ 0.91
CLN6-208ENST00000567060 MAP2K2P36507 400 aa20.72■□□□□ 0.91
CLN6-208ENST00000567060 IL15P40933 162 aaPredicted RBP20.72■□□□□ 0.91
CLN6-208ENST00000567060 CXCL9Q07325 125 aa20.72■□□□□ 0.91
CLN6-208ENST00000567060 AOC3Q16853 763 aa20.72■□□□□ 0.91
CLN6-208ENST00000567060 HSP90AB4PQ58FF6 505 aa20.72■□□□□ 0.91
CLN6-208ENST00000567060 SAPCD2Q86UD0 394 aa20.72■□□□□ 0.91
CLN6-208ENST00000567060 NIM1KQ8IY84 436 aa20.72■□□□□ 0.91
CLN6-208ENST00000567060 BEGAINQ9BUH8 593 aa20.72■□□□□ 0.91
CLN6-208ENST00000567060 ADARB2Q9NS39 739 aaKnown RBP20.72■□□□□ 0.91
CLN6-208ENST00000567060 ANKIB1Q9P2G1 1089 aa20.72■□□□□ 0.91
CLN6-208ENST00000567060 NSFL1CQ9UNZ2 370 aaKnown RBP20.72■□□□□ 0.91
CLN6-208ENST00000567060 NOP58Q9Y2X3 529 aaKnown RBP20.72■□□□□ 0.91
CLN6-208ENST00000567060 TRPM7Q96QT4 1865 aa20.71■□□□□ 0.91
CLN6-208ENST00000567060 PPIP5K2O43314 1243 aa20.71■□□□□ 0.91
CLN6-208ENST00000567060 CHRNDQ07001 517 aa20.71■□□□□ 0.91
CLN6-208ENST00000567060 ZNF594Q96JF6 807 aaPredicted RBP20.71■□□□□ 0.91
CLN6-208ENST00000567060 EYA3Q99504 573 aa20.71■□□□□ 0.91
CLN6-208ENST00000567060 GGA1Q9UJY5 639 aa20.71■□□□□ 0.91
CLN6-208ENST00000567060 PGAP2Q9UHJ9 254 aa20.7■□□□□ 0.9
CLN6-208ENST00000567060 GPSM2P81274 684 aa20.69■□□□□ 0.9
CLN6-208ENST00000567060 MLLT1Q03111 559 aaPredicted RBP20.69■□□□□ 0.9
CLN6-208ENST00000567060 G3BP1Q13283 466 aaKnown RBP eCLIP20.69■□□□□ 0.9
CLN6-208ENST00000567060 ZNRF3Q9ULT6 936 aa20.69■□□□□ 0.9
CLN6-208ENST00000567060 CELF2O95319 508 aaKnown RBP20.68■□□□□ 0.9
CLN6-208ENST00000567060 GMPSP49915 693 aaPredicted RBP20.68■□□□□ 0.9
CLN6-208ENST00000567060 HIRAP54198 1017 aaPredicted RBP20.68■□□□□ 0.9
CLN6-208ENST00000567060 UBE4AQ14139 1066 aa20.68■□□□□ 0.9
CLN6-208ENST00000567060 ERC1Q8IUD2 1116 aa20.68■□□□□ 0.9
CLN6-208ENST00000567060 TBC1D16Q8TBP0 767 aa20.68■□□□□ 0.9
CLN6-208ENST00000567060 GLIS2Q9BZE0 524 aaPredicted RBP20.68■□□□□ 0.9
CLN6-208ENST00000567060 A0A1B0GUL6 1792 aa20.67■□□□□ 0.9
CLN6-208ENST00000567060 PDE8BO95263 885 aa20.67■□□□□ 0.9
CLN6-208ENST00000567060 METTL24Q5JXM2 366 aa20.67■□□□□ 0.9
CLN6-208ENST00000567060 C15orf52Q6ZUT6 534 aaKnown RBP20.67■□□□□ 0.9
CLN6-208ENST00000567060 ATG9AQ7Z3C6 839 aa20.67■□□□□ 0.9
CLN6-208ENST00000567060 KLHDC4Q8TBB5 520 aa20.67■□□□□ 0.9
CLN6-208ENST00000567060 PUS3Q9BZE2 481 aaKnown RBP20.67■□□□□ 0.9
CLN6-208ENST00000567060 CEP126Q9P2H0 1117 aa20.67■□□□□ 0.9
CLN6-208ENST00000567060 DUOX1Q9NRD9 1551 aa20.67■□□□□ 0.9
CLN6-208ENST00000567060 SURF6O75683 361 aaKnown RBP20.66■□□□□ 0.9
CLN6-208ENST00000567060 UFL1O94874 794 aa20.66■□□□□ 0.9
CLN6-208ENST00000567060 NEFLP07196 543 aa20.66■□□□□ 0.9
CLN6-208ENST00000567060 KIAA2012Q0VF49 1180 aa20.66■□□□□ 0.9
CLN6-208ENST00000567060 LRRC24Q50LG9 513 aa20.66■□□□□ 0.9
CLN6-208ENST00000567060 SIRT2Q8IXJ6 389 aa20.66■□□□□ 0.9
CLN6-208ENST00000567060 VGLL2Q8N8G2 317 aa20.66■□□□□ 0.9
CLN6-208ENST00000567060 EXOC6Q8TAG9 804 aa20.66■□□□□ 0.9
CLN6-208ENST00000567060 PA2G4Q9UQ80 394 aaKnown RBP20.66■□□□□ 0.9
CLN6-208ENST00000567060 ZNF804BA4D1E1 1349 aa20.66■□□□□ 0.9
CLN6-208ENST00000567060 MED23Q9ULK4 1368 aa20.66■□□□□ 0.9
CLN6-208ENST00000567060 C6orf229H3BNL8 230 aa20.65■□□□□ 0.9
CLN6-208ENST00000567060 RAB11FIP3O75154 756 aa20.65■□□□□ 0.9
CLN6-208ENST00000567060 KCNJ4P48050 445 aa20.65■□□□□ 0.9
CLN6-208ENST00000567060 HHIPL1Q96JK4 782 aa20.65■□□□□ 0.9
CLN6-208ENST00000567060 MCOLN1Q9GZU1 580 aa20.65■□□□□ 0.9
CLN6-208ENST00000567060 POLLQ9UGP5 575 aa20.65■□□□□ 0.9
CLN6-208ENST00000567060 AKAP2Q9Y2D5 859 aa20.65■□□□□ 0.9
CLN6-208ENST00000567060 TNRC18O15417 2968 aaPredicted RBP20.65■□□□□ 0.9
CLN6-208ENST00000567060 HDAC1Q13547 482 aaPredicted RBP20.64■□□□□ 0.89
CLN6-208ENST00000567060 PUM3Q15397 648 aaKnown RBP20.64■□□□□ 0.89
CLN6-208ENST00000567060 WASHC4Q2M389 1173 aa20.64■□□□□ 0.89
CLN6-208ENST00000567060 ZC3H12CQ9C0D7 883 aaKnown RBP20.64■□□□□ 0.89
CLN6-208ENST00000567060 SIL1Q9H173 461 aa20.64■□□□□ 0.89
CLN6-208ENST00000567060 GPR108Q9NPR9 543 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms