RNA–Protein interactions for RNA: ENST00000565832.5

CHD9-217, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 2,169 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-217ENST00000565832 DBNLQ9UJU6 430 aaKnown RBP7.6□□□□□ -1.19
CHD9-217ENST00000565832 CCNL1Q9UK58 526 aaPredicted RBP7.6□□□□□ -1.19
CHD9-217ENST00000565832 NIP7Q9Y221 180 aaKnown RBP eCLIP7.6□□□□□ -1.19
CHD9-217ENST00000565832 ATRNO75882 1429 aa7.59□□□□□ -1.19
CHD9-217ENST00000565832 CCDC57Q2TAC2 916 aa7.59□□□□□ -1.19
CHD9-217ENST00000565832 NEUROD6Q96NK8 337 aa7.59□□□□□ -1.19
CHD9-217ENST00000565832 DBNDD2Q9BQY9 259 aa7.59□□□□□ -1.19
CHD9-217ENST00000565832 TBC1D2Q9BYX2 928 aa7.59□□□□□ -1.19
CHD9-217ENST00000565832 THSD7AQ9UPZ6 1657 aa7.59□□□□□ -1.2
CHD9-217ENST00000565832 CD2BP2O95400 341 aaKnown RBP7.59□□□□□ -1.2
CHD9-217ENST00000565832 CSF1RP07333 972 aa7.59□□□□□ -1.2
CHD9-217ENST00000565832 ITGA6P23229 1130 aa7.59□□□□□ -1.2
CHD9-217ENST00000565832 RBM25P49756 843 aaKnown RBP7.59□□□□□ -1.2
CHD9-217ENST00000565832 MDM2Q00987 491 aaPredicted RBP7.59□□□□□ -1.2
CHD9-217ENST00000565832 TNNI3KQ59H18 835 aa7.59□□□□□ -1.2
CHD9-217ENST00000565832 C6orf132Q5T0Z8 1188 aa7.59□□□□□ -1.2
CHD9-217ENST00000565832 CWC27Q6UX04 472 aaKnown RBP7.59□□□□□ -1.2
CHD9-217ENST00000565832 FPGT-TNNI3KV9GXZ4 949 aa7.59□□□□□ -1.2
CHD9-217ENST00000565832 BTAF1O14981 1849 aa7.58□□□□□ -1.2
CHD9-217ENST00000565832 TUBGCP6Q96RT7 1819 aa7.58□□□□□ -1.2
CHD9-217ENST00000565832 SNAP23O00161 211 aa7.58□□□□□ -1.2
CHD9-217ENST00000565832 IFIT5Q13325 482 aaKnown RBP7.58□□□□□ -1.2
CHD9-217ENST00000565832 DOK7Q18PE1 504 aa7.58□□□□□ -1.2
CHD9-217ENST00000565832 SLFNL1Q499Z3 407 aa7.58□□□□□ -1.2
CHD9-217ENST00000565832 USPL1Q5W0Q7 1092 aa7.58□□□□□ -1.2
CHD9-217ENST00000565832 KRT27Q7Z3Y8 459 aa7.58□□□□□ -1.2
CHD9-217ENST00000565832 ZDHHC16Q969W1 377 aa7.58□□□□□ -1.2
CHD9-217ENST00000565832 BCL2L12Q9HB09 334 aa7.58□□□□□ -1.2
CHD9-217ENST00000565832 SEC31BQ9NQW1 1179 aa7.58□□□□□ -1.2
CHD9-217ENST00000565832 COL15A1P39059 1388 aa7.58□□□□□ -1.2
CHD9-217ENST00000565832 EYA2O00167 538 aa7.57□□□□□ -1.2
CHD9-217ENST00000565832 ERC2O15083 957 aa7.57□□□□□ -1.2
CHD9-217ENST00000565832 GLRX3O76003 335 aaKnown RBP7.57□□□□□ -1.2
CHD9-217ENST00000565832 HSP90AB3PQ58FF7 597 aa7.57□□□□□ -1.2
CHD9-217ENST00000565832 TBC1D9BQ66K14 1250 aa7.57□□□□□ -1.2
CHD9-217ENST00000565832 PADI6Q6TGC4 694 aa7.57□□□□□ -1.2
CHD9-217ENST00000565832 HELBQ8NG08 1087 aaPredicted RBP7.57□□□□□ -1.2
CHD9-217ENST00000565832 ESYT1Q9BSJ8 1104 aa7.57□□□□□ -1.2
CHD9-217ENST00000565832 TTC41PQ6P2S7 1318 aa7.57□□□□□ -1.2
CHD9-217ENST00000565832 USP42Q9H9J4 1324 aaKnown RBP7.57□□□□□ -1.2
CHD9-217ENST00000565832 BRWD3Q6RI45 1802 aa7.57□□□□□ -1.2
CHD9-217ENST00000565832 SBF2Q86WG5 1849 aa7.57□□□□□ -1.2
CHD9-217ENST00000565832 WTIPA6NIX2 430 aaPredicted RBP7.57□□□□□ -1.2
CHD9-217ENST00000565832 ADORA1P30542 326 aa7.57□□□□□ -1.2
CHD9-217ENST00000565832 CTSWP56202 376 aa7.57□□□□□ -1.2
CHD9-217ENST00000565832 TAF7LQ5H9L4 462 aa7.57□□□□□ -1.2
CHD9-217ENST00000565832 CASC1Q6TDU7 716 aa7.57□□□□□ -1.2
CHD9-217ENST00000565832 LDHAL6AQ6ZMR3 332 aa7.57□□□□□ -1.2
CHD9-217ENST00000565832 FAM196AQ6ZSG2 479 aa7.57□□□□□ -1.2
CHD9-217ENST00000565832 NLRP7Q8WX94 980 aa7.57□□□□□ -1.2
CHD9-217ENST00000565832 UTP14AQ9BVJ6 771 aaKnown RBP7.57□□□□□ -1.2
CHD9-217ENST00000565832 TMUB1Q9BVT8 246 aa7.57□□□□□ -1.2
CHD9-217ENST00000565832 PLA2G12BQ9BX93 195 aa7.57□□□□□ -1.2
CHD9-217ENST00000565832 ADAM33Q9BZ11 813 aa7.57□□□□□ -1.2
CHD9-217ENST00000565832 ANO2Q9NQ90 1003 aa7.57□□□□□ -1.2
CHD9-217ENST00000565832 AOX1Q06278 1338 aa7.56□□□□□ -1.2
CHD9-217ENST00000565832 PDE8AO60658 829 aa7.56□□□□□ -1.2
CHD9-217ENST00000565832 CLCN1P35523 988 aa7.56□□□□□ -1.2
CHD9-217ENST00000565832 IL15P40933 162 aaPredicted RBP7.56□□□□□ -1.2
CHD9-217ENST00000565832 ERFEQ4G0M1 354 aa7.56□□□□□ -1.2
CHD9-217ENST00000565832 GPR153Q6NV75 609 aa7.56□□□□□ -1.2
CHD9-217ENST00000565832 FAM227BQ96M60 508 aa7.56□□□□□ -1.2
CHD9-217ENST00000565832 SLKQ9H2G2 1235 aaPredicted RBP7.56□□□□□ -1.2
CHD9-217ENST00000565832 PALD1Q9ULE6 856 aa7.56□□□□□ -1.2
CHD9-217ENST00000565832 TAF1P21675 1872 aa7.56□□□□□ -1.2
CHD9-217ENST00000565832 AK9Q5TCS8 1911 aa7.56□□□□□ -1.2
CHD9-217ENST00000565832 SH3TC1Q8TE82 1336 aa7.56□□□□□ -1.2
CHD9-217ENST00000565832 COL5A3P25940 1745 aaPredicted RBP7.56□□□□□ -1.2
CHD9-217ENST00000565832 A0A1B0GUL7 405 aa7.56□□□□□ -1.2
CHD9-217ENST00000565832 RPS6KA4O75676 772 aa7.56□□□□□ -1.2
CHD9-217ENST00000565832 NTSR2O95665 410 aa7.56□□□□□ -1.2
CHD9-217ENST00000565832 METTL3Q86U44 580 aaKnown RBP7.56□□□□□ -1.2
CHD9-217ENST00000565832 CNTROBQ8N137 903 aa7.56□□□□□ -1.2
CHD9-217ENST00000565832 DNAJC2Q99543 621 aaKnown RBP7.56□□□□□ -1.2
CHD9-217ENST00000565832 GPCPD1Q9NPB8 672 aa7.56□□□□□ -1.2
CHD9-217ENST00000565832 CEP126Q9P2H0 1117 aa7.56□□□□□ -1.2
CHD9-217ENST00000565832 RIPOR2Q9Y4F9 1068 aa7.56□□□□□ -1.2
CHD9-217ENST00000565832 CDHR2Q9BYE9 1310 aa7.55□□□□□ -1.2
CHD9-217ENST00000565832 TAF5LO75529 589 aa7.55□□□□□ -1.2
CHD9-217ENST00000565832 DDX46Q7L014 1031 aaKnown RBP7.55□□□□□ -1.2
CHD9-217ENST00000565832 GPATCH3Q96I76 525 aa7.55□□□□□ -1.2
CHD9-217ENST00000565832 SNRKQ9NRH2 765 aa7.55□□□□□ -1.2
CHD9-217ENST00000565832 RGS17Q9UGC6 210 aaPredicted RBP7.55□□□□□ -1.2
CHD9-217ENST00000565832 RTCBQ9Y3I0 505 aaKnown RBP7.55□□□□□ -1.2
CHD9-217ENST00000565832 CNTNAP4Q9C0A0 1308 aa7.55□□□□□ -1.2
CHD9-217ENST00000565832 ANKRD36CQ5JPF3 1778 aa7.55□□□□□ -1.2
CHD9-217ENST00000565832 ANKRD18BA2A2Z9 1011 aa7.54□□□□□ -1.2
CHD9-217ENST00000565832 RIMBP2O15034 1052 aa7.54□□□□□ -1.2
CHD9-217ENST00000565832 ZPR1O75312 459 aa7.54□□□□□ -1.2
CHD9-217ENST00000565832 REC8O95072 547 aa7.54□□□□□ -1.2
CHD9-217ENST00000565832 ATP5JP18859 108 aa7.54□□□□□ -1.2
CHD9-217ENST00000565832 PTH1RQ03431 593 aa7.54□□□□□ -1.2
CHD9-217ENST00000565832 SCARF1Q14162 830 aa7.54□□□□□ -1.2
CHD9-217ENST00000565832 PI16Q6UXB8 463 aa7.54□□□□□ -1.2
CHD9-217ENST00000565832 EVI5LQ96CN4 794 aa7.54□□□□□ -1.2
CHD9-217ENST00000565832 ANTXR1Q9H6X2 564 aa7.54□□□□□ -1.2
CHD9-217ENST00000565832 CNNM1Q9NRU3 951 aa7.54□□□□□ -1.2
CHD9-217ENST00000565832 NARFQ9UHQ1 456 aa7.54□□□□□ -1.2
CHD9-217ENST00000565832 SGSM2O43147 1006 aa7.54□□□□□ -1.2
CHD9-217ENST00000565832 CIAO1O76071 339 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms