RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 FOXD4L6Q3SYB3 417 aaPredicted RBP9.22□□□□□ -0.93
UBR1-205ENST00000564540 FOXD4L3Q6VB84 417 aaPredicted RBP9.22□□□□□ -0.93
UBR1-205ENST00000564540 SNX29Q8TEQ0 813 aa9.22□□□□□ -0.93
UBR1-205ENST00000564540 PBX4Q9BYU1 374 aa9.22□□□□□ -0.93
UBR1-205ENST00000564540 SMNDC1O75940 238 aaKnown RBP eCLIP9.21□□□□□ -0.94
UBR1-205ENST00000564540 KRTAP9-9Q9BYP9 154 aa9.21□□□□□ -0.94
UBR1-205ENST00000564540 KRTAP9-4Q9BYQ2 154 aa9.21□□□□□ -0.94
UBR1-205ENST00000564540 NDUFB5O43674 189 aa9.2□□□□□ -0.94
UBR1-205ENST00000564540 RSPO4Q2I0M5 234 aaPredicted RBP9.2□□□□□ -0.94
UBR1-205ENST00000564540 DTWD1Q8N5C7 304 aa9.2□□□□□ -0.94
UBR1-205ENST00000564540 HHIPQ96QV1 700 aa9.2□□□□□ -0.94
UBR1-205ENST00000564540 GATA4P43694 442 aa9.19□□□□□ -0.94
UBR1-205ENST00000564540 FBXO11Q86XK2 927 aa9.19□□□□□ -0.94
UBR1-205ENST00000564540 PMEPA1Q969W9 287 aa9.19□□□□□ -0.94
UBR1-205ENST00000564540 POP1Q99575 1024 aaKnown RBP9.19□□□□□ -0.94
UBR1-205ENST00000564540 DZANK1Q9NVP4 752 aa9.19□□□□□ -0.94
UBR1-205ENST00000564540 NFKBIEO00221 500 aa9.18□□□□□ -0.94
UBR1-205ENST00000564540 POLR3DP05423 398 aaPredicted RBP9.18□□□□□ -0.94
UBR1-205ENST00000564540 CDC25BP30305 580 aa9.18□□□□□ -0.94
UBR1-205ENST00000564540 NKAPLQ5M9Q1 402 aa9.18□□□□□ -0.94
UBR1-205ENST00000564540 ARTNQ5T4W7 220 aa9.18□□□□□ -0.94
UBR1-205ENST00000564540 TXNDC11Q6PKC3 985 aa9.18□□□□□ -0.94
UBR1-205ENST00000564540 NACC1Q96RE7 527 aa9.18□□□□□ -0.94
UBR1-205ENST00000564540 ZFYVE28Q9HCC9 887 aa9.18□□□□□ -0.94
UBR1-205ENST00000564540 SH2B1Q9NRF2 756 aaPredicted RBP9.18□□□□□ -0.94
UBR1-205ENST00000564540 LATS2Q9NRM7 1088 aa9.18□□□□□ -0.94
UBR1-205ENST00000564540 BTBD11A6QL63 1104 aa9.17□□□□□ -0.94
UBR1-205ENST00000564540 LINC01387J3KSC0 135 aa9.17□□□□□ -0.94
UBR1-205ENST00000564540 SETDB1Q15047 1291 aa9.17□□□□□ -0.94
UBR1-205ENST00000564540 LENG1Q96BZ8 264 aaPredicted RBP9.17□□□□□ -0.94
UBR1-205ENST00000564540 FAM129BQ96TA1 746 aa9.17□□□□□ -0.94
UBR1-205ENST00000564540 ZKSCAN3Q9BRR0 538 aa9.17□□□□□ -0.94
UBR1-205ENST00000564540 TRAIPQ9BWF2 469 aa9.17□□□□□ -0.94
UBR1-205ENST00000564540 BIN2Q9UBW5 565 aaPredicted RBP9.17□□□□□ -0.94
UBR1-205ENST00000564540 PPME1Q9Y570 386 aa9.17□□□□□ -0.94
UBR1-205ENST00000564540 IVNS1ABPQ9Y6Y0 642 aa9.17□□□□□ -0.94
UBR1-205ENST00000564540 SCO2A0A1W2PP80 73 aa9.16□□□□□ -0.94
UBR1-205ENST00000564540 CDC27P30260 824 aa9.16□□□□□ -0.94
UBR1-205ENST00000564540 TMC1Q8TDI8 760 aa9.16□□□□□ -0.94
UBR1-205ENST00000564540 OSMRQ99650 979 aa9.16□□□□□ -0.94
UBR1-205ENST00000564540 ZFP64Q9NPA5 681 aa9.16□□□□□ -0.94
UBR1-205ENST00000564540 AMOTL2Q9Y2J4 779 aa9.16□□□□□ -0.94
UBR1-205ENST00000564540 C9orf172C9J069 976 aa9.15□□□□□ -0.94
UBR1-205ENST00000564540 PDE2AO00408 941 aaPredicted RBP9.15□□□□□ -0.94
UBR1-205ENST00000564540 DLL1O00548 723 aa9.15□□□□□ -0.94
UBR1-205ENST00000564540 GPR182O15218 404 aa9.15□□□□□ -0.94
UBR1-205ENST00000564540 IGHA2P01877 340 aa9.15□□□□□ -0.94
UBR1-205ENST00000564540 PTPRAP18433 802 aa9.15□□□□□ -0.94
UBR1-205ENST00000564540 EPHA1P21709 976 aa9.15□□□□□ -0.94
UBR1-205ENST00000564540 ORC1Q13415 861 aa9.15□□□□□ -0.94
UBR1-205ENST00000564540 MBTPS1Q14703 1052 aa9.15□□□□□ -0.94
UBR1-205ENST00000564540 PEAR1Q5VY43 1037 aaPredicted RBP9.15□□□□□ -0.94
UBR1-205ENST00000564540 USPL1Q5W0Q7 1092 aa9.15□□□□□ -0.94
UBR1-205ENST00000564540 CACTIN-AS1Q8N1I8 211 aa9.15□□□□□ -0.94
UBR1-205ENST00000564540 USP21Q9UK80 565 aa9.15□□□□□ -0.94
UBR1-205ENST00000564540 EDN3P14138 238 aa9.14□□□□□ -0.95
UBR1-205ENST00000564540 KCNA1Q09470 495 aa9.14□□□□□ -0.95
UBR1-205ENST00000564540 PDE3BQ13370 1112 aa9.14□□□□□ -0.95
UBR1-205ENST00000564540 ADGRE1Q14246 886 aa9.14□□□□□ -0.95
UBR1-205ENST00000564540 KRTAP19-1Q8IUB9 90 aa9.14□□□□□ -0.95
UBR1-205ENST00000564540 GALNT11Q8NCW6 608 aa9.13□□□□□ -0.95
UBR1-205ENST00000564540 NXPE3Q969Y0 559 aa9.13□□□□□ -0.95
UBR1-205ENST00000564540 CITED4Q96RK1 184 aa9.13□□□□□ -0.95
UBR1-205ENST00000564540 CARD10Q9BWT7 1032 aa9.13□□□□□ -0.95
UBR1-205ENST00000564540 NIF3L1Q9GZT8 377 aa9.13□□□□□ -0.95
UBR1-205ENST00000564540 ADAM19Q9H013 955 aa9.13□□□□□ -0.95
UBR1-205ENST00000564540 MUC3BQ9H195 1237 aa9.13□□□□□ -0.95
UBR1-205ENST00000564540 KRTAP4-8A0A0G2JLE6 195 aa9.12□□□□□ -0.95
UBR1-205ENST00000564540 IGF2-ASQ6U949 168 aa9.12□□□□□ -0.95
UBR1-205ENST00000564540 TMEM102Q8N9M5 508 aaPredicted RBP9.12□□□□□ -0.95
UBR1-205ENST00000564540 RBCK1Q9BYM8 510 aa9.12□□□□□ -0.95
UBR1-205ENST00000564540 NRG1Q02297 640 aaPredicted RBP9.11□□□□□ -0.95
UBR1-205ENST00000564540 MAP4K3Q8IVH8 894 aa9.11□□□□□ -0.95
UBR1-205ENST00000564540 SRA1Q9HD15 236 aaKnown RBP9.11□□□□□ -0.95
UBR1-205ENST00000564540 TM4SF5O14894 197 aa9.1□□□□□ -0.95
UBR1-205ENST00000564540 FSCN2O14926 492 aa9.1□□□□□ -0.95
UBR1-205ENST00000564540 DYRK3O43781 588 aa9.1□□□□□ -0.95
UBR1-205ENST00000564540 TMC7Q7Z402 723 aa9.1□□□□□ -0.95
UBR1-205ENST00000564540 TXNRD3Q86VQ6 643 aa9.1□□□□□ -0.95
UBR1-205ENST00000564540 GALNT12Q8IXK2 581 aa9.1□□□□□ -0.95
UBR1-205ENST00000564540 TPSG1Q9NRR2 321 aa9.1□□□□□ -0.95
UBR1-205ENST00000564540 DCTN4Q9UJW0 460 aa9.1□□□□□ -0.95
UBR1-205ENST00000564540 A0A1W2PP55 124 aa9.09□□□□□ -0.95
UBR1-205ENST00000564540 FAM177BA6PVY3 158 aa9.09□□□□□ -0.95
UBR1-205ENST00000564540 METTL12A8MUP2 240 aa9.09□□□□□ -0.95
UBR1-205ENST00000564540 MAPK1P28482 360 aa9.09□□□□□ -0.95
UBR1-205ENST00000564540 ASAP3Q8TDY4 903 aa9.09□□□□□ -0.95
UBR1-205ENST00000564540 KCNK4Q9NYG8 393 aa9.09□□□□□ -0.95
UBR1-205ENST00000564540 SOX13Q9UN79 622 aa9.09□□□□□ -0.95
UBR1-205ENST00000564540 H3BRJ5 948 aa9.08□□□□□ -0.96
UBR1-205ENST00000564540 EIF1AYO14602 144 aaKnown RBP9.08□□□□□ -0.96
UBR1-205ENST00000564540 CPNE3O75131 537 aaKnown RBP9.08□□□□□ -0.96
UBR1-205ENST00000564540 ALX3O95076 343 aa9.08□□□□□ -0.96
UBR1-205ENST00000564540 NEFLP07196 543 aa9.08□□□□□ -0.96
UBR1-205ENST00000564540 NOS3P29474 1203 aa9.08□□□□□ -0.96
UBR1-205ENST00000564540 IREB2P48200 963 aaKnown RBP9.08□□□□□ -0.96
UBR1-205ENST00000564540 HGSNATQ68CP4 663 aa9.08□□□□□ -0.96
UBR1-205ENST00000564540 FAM117BQ6P1L5 589 aa9.08□□□□□ -0.96
UBR1-205ENST00000564540 WFDC12Q8WWY7 111 aa9.08□□□□□ -0.96
UBR1-205ENST00000564540 BSNDQ8WZ55 320 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms