RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 UFL1O94874 794 aa15.62■□□□□ 0.09
CLK3-214ENST00000564096 DPEP1P16444 411 aa15.62■□□□□ 0.09
CLK3-214ENST00000564096 CASC1Q6TDU7 716 aa15.62■□□□□ 0.09
CLK3-214ENST00000564096 VPS37DQ86XT2 251 aa15.62■□□□□ 0.09
CLK3-214ENST00000564096 NSFL1CQ9UNZ2 370 aaKnown RBP15.62■□□□□ 0.09
CLK3-214ENST00000564096 TRIM6-TRIM34B2RNG4 842 aa15.61■□□□□ 0.09
CLK3-214ENST00000564096 GSPT1P15170 499 aaKnown RBP15.61■□□□□ 0.09
CLK3-214ENST00000564096 ADORA1P30542 326 aa15.61■□□□□ 0.09
CLK3-214ENST00000564096 GPSM2P81274 684 aa15.61■□□□□ 0.09
CLK3-214ENST00000564096 DPP8Q6V1X1 898 aaPredicted RBP15.61■□□□□ 0.09
CLK3-214ENST00000564096 ZNF512BQ96KM6 892 aaPredicted RBP15.61■□□□□ 0.09
CLK3-214ENST00000564096 PIM2Q9P1W9 311 aa15.61■□□□□ 0.09
CLK3-214ENST00000564096 TAF1P21675 1872 aa15.61■□□□□ 0.09
CLK3-214ENST00000564096 MED23Q9ULK4 1368 aa15.61■□□□□ 0.09
CLK3-214ENST00000564096 EIF5BO60841 1220 aaKnown RBP15.6■□□□□ 0.09
CLK3-214ENST00000564096 ZNF804AQ7Z570 1209 aa15.6■□□□□ 0.09
CLK3-214ENST00000564096 MPNDQ8N594 471 aa15.6■□□□□ 0.09
CLK3-214ENST00000564096 EYA3Q99504 573 aa15.6■□□□□ 0.09
CLK3-214ENST00000564096 KIAA1551Q9HCM1 1747 aa15.6■□□□□ 0.09
CLK3-214ENST00000564096 A0A0G2JLW4 131 aa15.59■□□□□ 0.09
CLK3-214ENST00000564096 CDC45O75419 566 aa15.59■□□□□ 0.09
CLK3-214ENST00000564096 ARID4AP29374 1257 aaPredicted RBP15.59■□□□□ 0.09
CLK3-214ENST00000564096 CCDC93Q567U6 631 aa15.59■□□□□ 0.09
CLK3-214ENST00000564096 DALRD3Q5D0E6 543 aaKnown RBP15.59■□□□□ 0.09
CLK3-214ENST00000564096 CCDC102BQ68D86 513 aa15.59■□□□□ 0.09
CLK3-214ENST00000564096 C15orf52Q6ZUT6 534 aaKnown RBP15.59■□□□□ 0.09
CLK3-214ENST00000564096 SUPT20HQ8NEM7 779 aa15.59■□□□□ 0.09
CLK3-214ENST00000564096 EVI5LQ96CN4 794 aa15.59■□□□□ 0.09
CLK3-214ENST00000564096 DNAJC2Q99543 621 aaKnown RBP15.59■□□□□ 0.09
CLK3-214ENST00000564096 HAUS7Q99871 368 aa15.59■□□□□ 0.09
CLK3-214ENST00000564096 BOLA2Q9H3K6 86 aa15.59■□□□□ 0.09
CLK3-214ENST00000564096 LTBP1Q14766 1721 aa15.59■□□□□ 0.09
CLK3-214ENST00000564096 RFX7Q2KHR2 1363 aa15.59■□□□□ 0.09
CLK3-214ENST00000564096 C6orf229H3BNL8 230 aa15.58■□□□□ 0.08
CLK3-214ENST00000564096 SEMA3EO15041 775 aa15.58■□□□□ 0.08
CLK3-214ENST00000564096 SDSP20132 328 aa15.58■□□□□ 0.08
CLK3-214ENST00000564096 LRRFIP1Q32MZ4 808 aaKnown RBP15.58■□□□□ 0.08
CLK3-214ENST00000564096 TBC1D16Q8TBP0 767 aa15.58■□□□□ 0.08
CLK3-214ENST00000564096 RILPL2Q969X0 211 aa15.58■□□□□ 0.08
CLK3-214ENST00000564096 DUOX1Q9NRD9 1551 aa15.58■□□□□ 0.08
CLK3-214ENST00000564096 PHKA1P46020 1223 aa15.57■□□□□ 0.08
CLK3-214ENST00000564096 RTKN2Q8IZC4 609 aa15.57■□□□□ 0.08
CLK3-214ENST00000564096 CACNA1SQ13698 1873 aa15.57■□□□□ 0.08
CLK3-214ENST00000564096 SNAP23O00161 211 aa15.56■□□□□ 0.08
CLK3-214ENST00000564096 HIP1O00291 1037 aa15.56■□□□□ 0.08
CLK3-214ENST00000564096 FRAT2O75474 233 aaPredicted RBP15.56■□□□□ 0.08
CLK3-214ENST00000564096 HIBADHP31937 336 aaKnown RBP15.56■□□□□ 0.08
CLK3-214ENST00000564096 TTF1Q15361 905 aaPredicted RBP15.56■□□□□ 0.08
CLK3-214ENST00000564096 TICAM2Q86XR7 235 aa15.56■□□□□ 0.08
CLK3-214ENST00000564096 FSD1Q9BTV5 496 aa15.56■□□□□ 0.08
CLK3-214ENST00000564096 PAG1Q9NWQ8 432 aa15.56■□□□□ 0.08
CLK3-214ENST00000564096 DENND2AQ9ULE3 1009 aa15.56■□□□□ 0.08
CLK3-214ENST00000564096 PDS5AQ29RF7 1337 aaKnown RBP15.56■□□□□ 0.08
CLK3-214ENST00000564096 ZBTB22O15209 634 aa15.55■□□□□ 0.08
CLK3-214ENST00000564096 C21orf2O43822 256 aa15.55■□□□□ 0.08
CLK3-214ENST00000564096 KCNA3P22001 575 aa15.55■□□□□ 0.08
CLK3-214ENST00000564096 GYG1P46976 350 aa15.55■□□□□ 0.08
CLK3-214ENST00000564096 BCAMP50895 628 aa15.55■□□□□ 0.08
CLK3-214ENST00000564096 SPATA5Q8NB90 893 aa15.55■□□□□ 0.08
CLK3-214ENST00000564096 ZNF219Q9P2Y4 722 aaPredicted RBP15.55■□□□□ 0.08
CLK3-214ENST00000564096 SLX4Q8IY92 1834 aa15.54■□□□□ 0.08
CLK3-214ENST00000564096 GOLIM4O00461 696 aa15.54■□□□□ 0.08
CLK3-214ENST00000564096 MAP4K4O95819 1239 aaPredicted RBP15.54■□□□□ 0.08
CLK3-214ENST00000564096 KLRK1P26718 216 aa15.54■□□□□ 0.08
CLK3-214ENST00000564096 MCAMP43121 646 aa15.54■□□□□ 0.08
CLK3-214ENST00000564096 FKBP4Q02790 459 aaKnown RBP eCLIP15.54■□□□□ 0.08
CLK3-214ENST00000564096 RASGRF1Q13972 1273 aa15.54■□□□□ 0.08
CLK3-214ENST00000564096 FBXO33Q7Z6M2 555 aa15.54■□□□□ 0.08
CLK3-214ENST00000564096 C7orf43Q8WVR3 580 aa15.54■□□□□ 0.08
CLK3-214ENST00000564096 FAM84BQ96KN1 310 aaPredicted RBP15.54■□□□□ 0.08
CLK3-214ENST00000564096 RTFDC1Q9BY42 306 aaPredicted RBP15.54■□□□□ 0.08
CLK3-214ENST00000564096 ZC3H12CQ9C0D7 883 aaKnown RBP15.54■□□□□ 0.08
CLK3-214ENST00000564096 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.54■□□□□ 0.083e-7■■□□□ 14.4
CLK3-214ENST00000564096 DIAPH3Q9NSV4 1193 aa15.54■□□□□ 0.08
CLK3-214ENST00000564096 POLLQ9UGP5 575 aa15.54■□□□□ 0.08
CLK3-214ENST00000564096 SNED1Q8TER0 1413 aa15.53■□□□□ 0.08
CLK3-214ENST00000564096 IRS2Q9Y4H2 1338 aa15.53■□□□□ 0.08
CLK3-214ENST00000564096 G3V3G9 751 aa15.53■□□□□ 0.08
CLK3-214ENST00000564096 WASHC4Q2M389 1173 aa15.53■□□□□ 0.08
CLK3-214ENST00000564096 DCAF8Q5TAQ9 597 aa15.53■□□□□ 0.08
CLK3-214ENST00000564096 SLC51AQ86UW1 340 aa15.53■□□□□ 0.08
CLK3-214ENST00000564096 PSMD1Q99460 953 aa15.53■□□□□ 0.08
CLK3-214ENST00000564096 FHDC1Q9C0D6 1143 aaPredicted RBP15.53■□□□□ 0.08
CLK3-214ENST00000564096 COA1Q9GZY4 146 aa15.53■□□□□ 0.08
CLK3-214ENST00000564096 BRCA1P38398 1863 aaKnown RBP15.52■□□□□ 0.08
CLK3-214ENST00000564096 C8orf34Q49A92 452 aa15.52■□□□□ 0.08
CLK3-214ENST00000564096 ZSCAN25Q6NSZ9 544 aa15.52■□□□□ 0.08
CLK3-214ENST00000564096 OLFM4Q6UX06 510 aa15.52■□□□□ 0.08
CLK3-214ENST00000564096 ZGPATQ8N5A5 531 aaKnown RBP15.52■□□□□ 0.08
CLK3-214ENST00000564096 KBTBD3Q8NAB2 608 aa15.52■□□□□ 0.08
CLK3-214ENST00000564096 RUFY2Q8WXA3 655 aa15.52■□□□□ 0.08
CLK3-214ENST00000564096 HMG20BQ9P0W2 317 aa15.52■□□□□ 0.08
CLK3-214ENST00000564096 BCS1LQ9Y276 419 aa15.52■□□□□ 0.08
CLK3-214ENST00000564096 RAD50Q92878 1312 aa15.51■□□□□ 0.07
CLK3-214ENST00000564096 IGSF3O75054 1194 aa15.51■□□□□ 0.07
CLK3-214ENST00000564096 ZAP70P43403 619 aa15.51■□□□□ 0.07
CLK3-214ENST00000564096 SCARF1Q14162 830 aa15.51■□□□□ 0.07
CLK3-214ENST00000564096 TBC1D9Q6ZT07 1266 aa15.51■□□□□ 0.07
CLK3-214ENST00000564096 NLGN2Q8NFZ4 835 aa15.51■□□□□ 0.07
CLK3-214ENST00000564096 CNKSR2Q8WXI2 1034 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms