RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 UBE3BQ7Z3V4 1068 aa21.56■■□□□ 1.04
HDGFL3-203ENST00000563404 CCDC102AQ96A19 550 aa21.56■■□□□ 1.04
HDGFL3-203ENST00000563404 ZNF646O15015 1829 aaPredicted RBP21.56■■□□□ 1.04
HDGFL3-203ENST00000563404 SLC10A3P09131 477 aa21.55■■□□□ 1.04
HDGFL3-203ENST00000563404 CCT4P50991 539 aaKnown RBP21.55■■□□□ 1.04
HDGFL3-203ENST00000563404 CASP7P55210 303 aa21.55■■□□□ 1.04
HDGFL3-203ENST00000563404 DACT2Q5SW24 774 aa21.55■■□□□ 1.04
HDGFL3-203ENST00000563404 TXNRD3Q86VQ6 643 aa21.55■■□□□ 1.04
HDGFL3-203ENST00000563404 GCKRQ14397 625 aa21.54■■□□□ 1.04
HDGFL3-203ENST00000563404 FAM161AQ3B820 660 aa21.54■■□□□ 1.04
HDGFL3-203ENST00000563404 IL16Q14005 1332 aa21.54■■□□□ 1.04
HDGFL3-203ENST00000563404 KLRK1P26718 216 aa21.53■■□□□ 1.04
HDGFL3-203ENST00000563404 FLIIQ13045 1269 aa21.53■■□□□ 1.04
HDGFL3-203ENST00000563404 PLA2G12BQ9BX93 195 aa21.53■■□□□ 1.04
HDGFL3-203ENST00000563404 PITPNM2Q9BZ72 1349 aa21.53■■□□□ 1.04
HDGFL3-203ENST00000563404 DGKZQ13574 1117 aa21.52■■□□□ 1.04
HDGFL3-203ENST00000563404 NBPF9Q3BBW0 867 aa21.52■■□□□ 1.04
HDGFL3-203ENST00000563404 MOB2Q70IA6 237 aa21.52■■□□□ 1.04
HDGFL3-203ENST00000563404 RASAL3Q86YV0 1011 aa21.52■■□□□ 1.04
HDGFL3-203ENST00000563404 CSRNP1Q96S65 589 aa21.52■■□□□ 1.04
HDGFL3-203ENST00000563404 RNF186Q9NXI6 227 aa21.52■■□□□ 1.04
HDGFL3-203ENST00000563404 SAGE1Q9NXZ1 904 aa21.52■■□□□ 1.04
HDGFL3-203ENST00000563404 FANCIQ9NVI1 1328 aa21.52■■□□□ 1.03
HDGFL3-203ENST00000563404 CSF1RP07333 972 aa21.51■■□□□ 1.03
HDGFL3-203ENST00000563404 ITGA6P23229 1130 aa21.51■■□□□ 1.03
HDGFL3-203ENST00000563404 RGS19P49795 217 aa21.51■■□□□ 1.03
HDGFL3-203ENST00000563404 PRAMEF18Q5VWM3 479 aa21.51■■□□□ 1.03
HDGFL3-203ENST00000563404 COA1Q9GZY4 146 aa21.51■■□□□ 1.03
HDGFL3-203ENST00000563404 TRPA1O75762 1119 aa21.5■■□□□ 1.03
HDGFL3-203ENST00000563404 IGHMBP2P38935 993 aaKnown RBP21.5■■□□□ 1.03
HDGFL3-203ENST00000563404 NCBP3Q53F19 620 aaKnown RBP21.5■■□□□ 1.03
HDGFL3-203ENST00000563404 DNAAF4Q8WXU2 420 aa21.5■■□□□ 1.03
HDGFL3-203ENST00000563404 LEMD3Q9Y2U8 911 aa21.5■■□□□ 1.03
HDGFL3-203ENST00000563404 PAPPA2Q9BXP8 1791 aa21.49■■□□□ 1.03
HDGFL3-203ENST00000563404 VAMP4O75379 141 aa21.49■■□□□ 1.03
HDGFL3-203ENST00000563404 FKBP5Q13451 457 aaPredicted RBP21.49■■□□□ 1.03
HDGFL3-203ENST00000563404 STRIP1Q5VSL9 837 aa21.49■■□□□ 1.03
HDGFL3-203ENST00000563404 FBXW7Q969H0 707 aa21.49■■□□□ 1.03
HDGFL3-203ENST00000563404 ZNF804BA4D1E1 1349 aa21.49■■□□□ 1.03
HDGFL3-203ENST00000563404 WNT10BO00744 389 aa21.48■■□□□ 1.03
HDGFL3-203ENST00000563404 FKBP1BP68106 108 aa21.48■■□□□ 1.03
HDGFL3-203ENST00000563404 LINS1Q8NG48 757 aa21.48■■□□□ 1.03
HDGFL3-203ENST00000563404 SALL2Q9Y467 1007 aaPredicted RBP21.47■■□□□ 1.03
HDGFL3-203ENST00000563404 UBE2Q2LH0YL09 131 aa21.46■■□□□ 1.03
HDGFL3-203ENST00000563404 SNAP23O00161 211 aa21.46■■□□□ 1.03
HDGFL3-203ENST00000563404 CHRNDQ07001 517 aa21.46■■□□□ 1.03
HDGFL3-203ENST00000563404 MPHOSPH8Q99549 860 aa21.46■■□□□ 1.03
HDGFL3-203ENST00000563404 ANKRD2Q9GZV1 360 aa21.46■■□□□ 1.03
HDGFL3-203ENST00000563404 MYH16Q9H6N6 1097 aa21.46■■□□□ 1.03
HDGFL3-203ENST00000563404 MRS2Q9HD23 443 aa21.46■■□□□ 1.03
HDGFL3-203ENST00000563404 MYO3BQ8WXR4 1341 aa21.46■■□□□ 1.03
HDGFL3-203ENST00000563404 IRS2Q9Y4H2 1338 aa21.46■■□□□ 1.03
HDGFL3-203ENST00000563404 SASH1O94885 1247 aa21.45■■□□□ 1.02
HDGFL3-203ENST00000563404 MLLT1Q03111 559 aaPredicted RBP21.45■■□□□ 1.02
HDGFL3-203ENST00000563404 EXOSC9Q06265 439 aaKnown RBP21.45■■□□□ 1.02
HDGFL3-203ENST00000563404 TTLL5Q6EMB2 1281 aa21.45■■□□□ 1.02
HDGFL3-203ENST00000563404 OGFOD1Q8N543 542 aa21.45■■□□□ 1.02
HDGFL3-203ENST00000563404 SPINK5Q9NQ38 1064 aaPredicted RBP21.45■■□□□ 1.02
HDGFL3-203ENST00000563404 F6X3S4 739 aa21.44■■□□□ 1.02
HDGFL3-203ENST00000563404 FOXO4P98177 505 aa21.44■■□□□ 1.02
HDGFL3-203ENST00000563404 WDR63Q8IWG1 891 aa21.44■■□□□ 1.02
HDGFL3-203ENST00000563404 AKAP11Q9UKA4 1901 aa21.44■■□□□ 1.02
HDGFL3-203ENST00000563404 GTF2IP78347 998 aa21.43■■□□□ 1.02
HDGFL3-203ENST00000563404 KIAA0825Q8IV33 1275 aa21.43■■□□□ 1.02
HDGFL3-203ENST00000563404 ZBED3Q96IU2 234 aaPredicted RBP21.43■■□□□ 1.02
HDGFL3-203ENST00000563404 ANKRD18BA2A2Z9 1011 aa21.42■■□□□ 1.02
HDGFL3-203ENST00000563404 TAF5LO75529 589 aa21.42■■□□□ 1.02
HDGFL3-203ENST00000563404 BEND3Q5T5X7 828 aa21.42■■□□□ 1.02
HDGFL3-203ENST00000563404 HELBQ8NG08 1087 aaPredicted RBP21.42■■□□□ 1.02
HDGFL3-203ENST00000563404 CD209Q9NNX6 404 aa21.42■■□□□ 1.02
HDGFL3-203ENST00000563404 CACNA1FO60840 1977 aa21.41■■□□□ 1.02
HDGFL3-203ENST00000563404 EPHA10Q5JZY3 1008 aa21.41■■□□□ 1.02
HDGFL3-203ENST00000563404 REM2Q8IYK8 340 aaPredicted RBP21.41■■□□□ 1.02
HDGFL3-203ENST00000563404 CERS5Q8N5B7 392 aa21.41■■□□□ 1.02
HDGFL3-203ENST00000563404 KCNJ4P48050 445 aa21.4■■□□□ 1.02
HDGFL3-203ENST00000563404 A0A1B0GUL6 1792 aa21.4■■□□□ 1.02
HDGFL3-203ENST00000563404 MMP14P50281 582 aa21.39■■□□□ 1.01
HDGFL3-203ENST00000563404 TTLL12Q14166 644 aaPredicted RBP21.39■■□□□ 1.01
HDGFL3-203ENST00000563404 C15orf52Q6ZUT6 534 aaKnown RBP21.39■■□□□ 1.01
HDGFL3-203ENST00000563404 PCDHAC2Q9Y5I4 1007 aa21.39■■□□□ 1.01
HDGFL3-203ENST00000563404 TNRC18O15417 2968 aaPredicted RBP21.38■■□□□ 1.01
HDGFL3-203ENST00000563404 IFIT5Q13325 482 aaKnown RBP21.38■■□□□ 1.01
HDGFL3-203ENST00000563404 HDAC9Q9UKV0 1011 aa21.38■■□□□ 1.01
HDGFL3-203ENST00000563404 TBC1D8O95759 1140 aa21.37■■□□□ 1.01
HDGFL3-203ENST00000563404 PTPN12Q05209 780 aaKnown RBP21.37■■□□□ 1.01
HDGFL3-203ENST00000563404 MKRN3Q13064 507 aaKnown RBP21.37■■□□□ 1.01
HDGFL3-203ENST00000563404 PRKG1Q13976 671 aa21.37■■□□□ 1.01
HDGFL3-203ENST00000563404 LMBR1LQ6UX01 489 aa21.37■■□□□ 1.01
HDGFL3-203ENST00000563404 CTU1Q7Z7A3 348 aaKnown RBP21.37■■□□□ 1.01
HDGFL3-203ENST00000563404 APOBEC3FQ8IUX4 373 aaKnown RBP21.37■■□□□ 1.01
HDGFL3-203ENST00000563404 ZNF594Q96JF6 807 aaPredicted RBP21.37■■□□□ 1.01
HDGFL3-203ENST00000563404 FZD1Q9UP38 647 aa21.37■■□□□ 1.01
HDGFL3-203ENST00000563404 CHMP3Q9Y3E7 222 aa21.37■■□□□ 1.01
HDGFL3-203ENST00000563404 ANP32CO43423 234 aa21.36■■□□□ 1.01
HDGFL3-203ENST00000563404 IL1R1P14778 569 aa21.36■■□□□ 1.01
HDGFL3-203ENST00000563404 NF2P35240 595 aa21.36■■□□□ 1.01
HDGFL3-203ENST00000563404 TM4SF4P48230 202 aa21.36■■□□□ 1.01
HDGFL3-203ENST00000563404 LDLRAD1Q5T700 205 aa21.35■■□□□ 1.01
HDGFL3-203ENST00000563404 MTMR14Q8NCE2 650 aa21.35■■□□□ 1.01
HDGFL3-203ENST00000563404 AOX1Q06278 1338 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 165.3 ms