RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 C5P01031 1676 aa16.37■□□□□ 0.21
GTF3C1-203ENST00000562609 EVA1CP58658 441 aa16.37■□□□□ 0.21
GTF3C1-203ENST00000562609 SNW1Q13573 536 aaKnown RBP16.37■□□□□ 0.21
GTF3C1-203ENST00000562609 GOLGA5Q8TBA6 731 aa16.37■□□□□ 0.21
GTF3C1-203ENST00000562609 ZCRB1Q8TBF4 217 aaKnown RBP16.37■□□□□ 0.21
GTF3C1-203ENST00000562609 WDR17Q8IZU2 1322 aa16.37■□□□□ 0.21
GTF3C1-203ENST00000562609 N4BP2Q86UW6 1770 aaPredicted RBP16.37■□□□□ 0.21
GTF3C1-203ENST00000562609 A0A1B0GUL7 405 aa16.37■□□□□ 0.21
GTF3C1-203ENST00000562609 ALDH1L1O75891 902 aa16.37■□□□□ 0.21
GTF3C1-203ENST00000562609 CASTP20810 708 aaKnown RBP16.37■□□□□ 0.21
GTF3C1-203ENST00000562609 AK2P54819 239 aa16.37■□□□□ 0.21
GTF3C1-203ENST00000562609 STAP2Q9UGK3 403 aa16.37■□□□□ 0.21
GTF3C1-203ENST00000562609 CPDO75976 1380 aa16.36■□□□□ 0.21
GTF3C1-203ENST00000562609 GORABQ5T7V8 394 aa16.36■□□□□ 0.21
GTF3C1-203ENST00000562609 ANKRD13DQ6ZTN6 518 aa16.36■□□□□ 0.21
GTF3C1-203ENST00000562609 FMNL2Q96PY5 1086 aa16.36■□□□□ 0.21
GTF3C1-203ENST00000562609 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.36■□□□□ 0.21
GTF3C1-203ENST00000562609 RAB11FIP3O75154 756 aa16.36■□□□□ 0.21
GTF3C1-203ENST00000562609 GJB2P29033 226 aa16.36■□□□□ 0.21
GTF3C1-203ENST00000562609 AXDND1Q5T1B0 1012 aaPredicted RBP16.36■□□□□ 0.21
GTF3C1-203ENST00000562609 PI4K2BQ8TCG2 481 aa16.36■□□□□ 0.21
GTF3C1-203ENST00000562609 UBXN4Q92575 508 aa16.36■□□□□ 0.21
GTF3C1-203ENST00000562609 LIMCH1Q9UPQ0 1083 aa16.36■□□□□ 0.21
GTF3C1-203ENST00000562609 ELP1O95163 1332 aa16.36■□□□□ 0.21
GTF3C1-203ENST00000562609 TTC31Q49AM3 519 aaPredicted RBP16.35■□□□□ 0.21
GTF3C1-203ENST00000562609 EPHA10Q5JZY3 1008 aa16.35■□□□□ 0.21
GTF3C1-203ENST00000562609 RUFY3Q7L099 469 aa16.35■□□□□ 0.21
GTF3C1-203ENST00000562609 IL17RAQ96F46 866 aa16.35■□□□□ 0.21
GTF3C1-203ENST00000562609 GOLGA6L19H0YKK7 550 aa16.35■□□□□ 0.21
GTF3C1-203ENST00000562609 LMAN1P49257 510 aa16.35■□□□□ 0.21
GTF3C1-203ENST00000562609 CCDC93Q567U6 631 aa16.35■□□□□ 0.21
GTF3C1-203ENST00000562609 EP400NLQ6ZTU2 488 aa16.35■□□□□ 0.21
GTF3C1-203ENST00000562609 PACS2Q86VP3 889 aa16.35■□□□□ 0.21
GTF3C1-203ENST00000562609 AK7Q96M32 723 aa16.35■□□□□ 0.21
GTF3C1-203ENST00000562609 UBXN6Q9BZV1 441 aa16.35■□□□□ 0.21
GTF3C1-203ENST00000562609 ORC3Q9UBD5 711 aaPredicted RBP16.35■□□□□ 0.21
GTF3C1-203ENST00000562609 NEURL1BA8MQ27 555 aa16.34■□□□□ 0.21
GTF3C1-203ENST00000562609 NEXNQ0ZGT2 675 aa16.34■□□□□ 0.21
GTF3C1-203ENST00000562609 SMC1AQ14683 1233 aaKnown RBP16.34■□□□□ 0.21
GTF3C1-203ENST00000562609 REXO1L1PQ8IX06 675 aa16.34■□□□□ 0.21
GTF3C1-203ENST00000562609 GOLGA6L4A6NEF3 574 aa16.34■□□□□ 0.21
GTF3C1-203ENST00000562609 HSPA4P34932 840 aa16.34■□□□□ 0.21
GTF3C1-203ENST00000562609 SART3Q15020 963 aaKnown RBP16.34■□□□□ 0.21
GTF3C1-203ENST00000562609 NOM1Q5C9Z4 860 aaKnown RBP16.34■□□□□ 0.21
GTF3C1-203ENST00000562609 CCDC83Q8IWF9 413 aa16.34■□□□□ 0.21
GTF3C1-203ENST00000562609 CCDC34Q96HJ3 373 aa16.34■□□□□ 0.21
GTF3C1-203ENST00000562609 ADAMTS7Q9UKP4 1686 aa16.34■□□□□ 0.21
GTF3C1-203ENST00000562609 SASH3O75995 380 aa16.33■□□□□ 0.21
GTF3C1-203ENST00000562609 KRT85P78386 507 aa16.33■□□□□ 0.21
GTF3C1-203ENST00000562609 CT47A1Q5JQC4 288 aaPredicted RBP16.33■□□□□ 0.21
GTF3C1-203ENST00000562609 FAM173BQ6P4H8 233 aa16.33■□□□□ 0.21
GTF3C1-203ENST00000562609 LRP10Q7Z4F1 713 aa16.33■□□□□ 0.21
GTF3C1-203ENST00000562609 MRFAP1L1Q96HT8 127 aa16.33■□□□□ 0.21
GTF3C1-203ENST00000562609 ZNF330Q9Y3S2 320 aaPredicted RBP16.33■□□□□ 0.21
GTF3C1-203ENST00000562609 LARGE1O95461 756 aa16.33■□□□□ 0.2
GTF3C1-203ENST00000562609 A1BGP04217 495 aa16.33■□□□□ 0.2
GTF3C1-203ENST00000562609 GCKRQ14397 625 aa16.33■□□□□ 0.2
GTF3C1-203ENST00000562609 TTC14Q96N46 770 aa16.33■□□□□ 0.2
GTF3C1-203ENST00000562609 CCDC8Q9H0W5 538 aaPredicted RBP16.33■□□□□ 0.2
GTF3C1-203ENST00000562609 PLEKHG2Q9H7P9 1386 aa16.33■□□□□ 0.2
GTF3C1-203ENST00000562609 TSGA10IPQ3SY00 556 aa16.32■□□□□ 0.2
GTF3C1-203ENST00000562609 UBE3BQ7Z3V4 1068 aa16.32■□□□□ 0.2
GTF3C1-203ENST00000562609 FERMT3Q86UX7 667 aa16.32■□□□□ 0.2
GTF3C1-203ENST00000562609 CLASRPQ8N2M8 674 aaKnown RBP16.32■□□□□ 0.2
GTF3C1-203ENST00000562609 IL2RBP14784 551 aa16.32■□□□□ 0.2
GTF3C1-203ENST00000562609 MTX1Q13505 466 aa16.32■□□□□ 0.2
GTF3C1-203ENST00000562609 METTL22Q9BUU2 404 aaPredicted RBP16.32■□□□□ 0.2
GTF3C1-203ENST00000562609 NBPF26B4DH59 902 aa16.32■□□□□ 0.2
GTF3C1-203ENST00000562609 SASH1O94885 1247 aa16.32■□□□□ 0.2
GTF3C1-203ENST00000562609 NBPF14Q5TI25 921 aa16.32■□□□□ 0.2
GTF3C1-203ENST00000562609 NBPF10Q6P3W6 841 aaKnown RBP16.32■□□□□ 0.2
GTF3C1-203ENST00000562609 CWC27Q6UX04 472 aaKnown RBP16.32■□□□□ 0.2
GTF3C1-203ENST00000562609 AACSQ86V21 672 aa16.32■□□□□ 0.2
GTF3C1-203ENST00000562609 NBPF15Q8N660 670 aa16.32■□□□□ 0.2
GTF3C1-203ENST00000562609 CLSTN2Q9H4D0 955 aa16.32■□□□□ 0.2
GTF3C1-203ENST00000562609 COL5A2P05997 1499 aaPredicted RBP16.32■□□□□ 0.2
GTF3C1-203ENST00000562609 TBC1D8O95759 1140 aa16.31■□□□□ 0.2
GTF3C1-203ENST00000562609 SARM1Q6SZW1 724 aa16.31■□□□□ 0.2
GTF3C1-203ENST00000562609 DDX19AQ9NUU7 478 aaKnown RBP16.31■□□□□ 0.2
GTF3C1-203ENST00000562609 ADAM21Q9UKJ8 722 aa16.31■□□□□ 0.2
GTF3C1-203ENST00000562609 PCDH11XQ9BZA7 1347 aa16.31■□□□□ 0.2
GTF3C1-203ENST00000562609 PCDH11YQ9BZA8 1340 aa16.31■□□□□ 0.2
GTF3C1-203ENST00000562609 CPA1P15085 419 aa16.31■□□□□ 0.2
GTF3C1-203ENST00000562609 ACTN2P35609 894 aa16.31■□□□□ 0.2
GTF3C1-203ENST00000562609 TTLL7Q6ZT98 887 aa16.31■□□□□ 0.2
GTF3C1-203ENST00000562609 BANK1Q8NDB2 785 aa16.31■□□□□ 0.2
GTF3C1-203ENST00000562609 PPP1R13BQ96KQ4 1090 aa16.31■□□□□ 0.2
GTF3C1-203ENST00000562609 DEF6Q9H4E7 631 aa16.31■□□□□ 0.2
GTF3C1-203ENST00000562609 KCND1Q9NSA2 647 aa16.31■□□□□ 0.2
GTF3C1-203ENST00000562609 TLR7Q9NYK1 1049 aaKnown RBP16.31■□□□□ 0.2
GTF3C1-203ENST00000562609 ATP8B1O43520 1251 aa16.3■□□□□ 0.2
GTF3C1-203ENST00000562609 IFIT2P09913 472 aaKnown RBP16.3■□□□□ 0.2
GTF3C1-203ENST00000562609 ATP2B1P20020 1258 aa16.3■□□□□ 0.2
GTF3C1-203ENST00000562609 MAGEA9P43362 315 aa16.3■□□□□ 0.2
GTF3C1-203ENST00000562609 HSP90AB4PQ58FF6 505 aa16.3■□□□□ 0.2
GTF3C1-203ENST00000562609 E4F1Q66K89 784 aaPredicted RBP16.3■□□□□ 0.2
GTF3C1-203ENST00000562609 RBM43Q6ZSC3 357 aaKnown RBP16.3■□□□□ 0.2
GTF3C1-203ENST00000562609 ZNF622Q969S3 477 aaKnown RBP eCLIP16.3■□□□□ 0.2
GTF3C1-203ENST00000562609 EXOC4Q96A65 974 aa16.3■□□□□ 0.2
GTF3C1-203ENST00000562609 BTG4Q9NY30 223 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms