RNA–Protein interactions for RNA: ENST00000560871.5

RABGGTA-219, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 886 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-219ENST00000560871 TAF5LO75529 589 aa19.36■□□□□ 0.69
RABGGTA-219ENST00000560871 GMPSP49915 693 aaPredicted RBP19.36■□□□□ 0.69
RABGGTA-219ENST00000560871 MVPQ14764 893 aaKnown RBP19.36■□□□□ 0.69
RABGGTA-219ENST00000560871 C20orf194Q5TEA3 1177 aa19.36■□□□□ 0.69
RABGGTA-219ENST00000560871 MAP1SQ66K74 1059 aaPredicted RBP19.36■□□□□ 0.69
RABGGTA-219ENST00000560871 CNTROBQ8N137 903 aa19.36■□□□□ 0.69
RABGGTA-219ENST00000560871 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.36■□□□□ 0.69
RABGGTA-219ENST00000560871 ZC3H12CQ9C0D7 883 aaKnown RBP19.36■□□□□ 0.69
RABGGTA-219ENST00000560871 DBNDD1Q9H9R9 158 aa19.36■□□□□ 0.69
RABGGTA-219ENST00000560871 SNAP23O00161 211 aa19.35■□□□□ 0.69
RABGGTA-219ENST00000560871 ECE2O60344 883 aa19.35■□□□□ 0.69
RABGGTA-219ENST00000560871 KLRK1P26718 216 aa19.35■□□□□ 0.69
RABGGTA-219ENST00000560871 PDE3AQ14432 1141 aa19.35■□□□□ 0.69
RABGGTA-219ENST00000560871 VGLL2Q8N8G2 317 aa19.35■□□□□ 0.69
RABGGTA-219ENST00000560871 HELBQ8NG08 1087 aaPredicted RBP19.35■□□□□ 0.69
RABGGTA-219ENST00000560871 ADARB2Q9NS39 739 aaKnown RBP19.35■□□□□ 0.69
RABGGTA-219ENST00000560871 SCN9AQ15858 1988 aa19.35■□□□□ 0.69
RABGGTA-219ENST00000560871 ZNF646O15015 1829 aaPredicted RBP19.35■□□□□ 0.69
RABGGTA-219ENST00000560871 PSME4Q14997 1843 aa19.35■□□□□ 0.69
RABGGTA-219ENST00000560871 MROH5Q6ZUA9 1318 aa19.34■□□□□ 0.69
RABGGTA-219ENST00000560871 C15orf52Q6ZUT6 534 aaKnown RBP19.34■□□□□ 0.69
RABGGTA-219ENST00000560871 TXNRD3Q86VQ6 643 aa19.34■□□□□ 0.69
RABGGTA-219ENST00000560871 C1orf115Q9H7X2 142 aa19.34■□□□□ 0.69
RABGGTA-219ENST00000560871 COPRSQ9NQ92 184 aa19.34■□□□□ 0.69
RABGGTA-219ENST00000560871 COG6Q9Y2V7 657 aa19.34■□□□□ 0.69
RABGGTA-219ENST00000560871 TRPM7Q96QT4 1865 aa19.33■□□□□ 0.69
RABGGTA-219ENST00000560871 EYA2O00167 538 aa19.33■□□□□ 0.68
RABGGTA-219ENST00000560871 SRGAP3O43295 1099 aa19.33■□□□□ 0.68
RABGGTA-219ENST00000560871 RRP1P56182 461 aaKnown RBP19.33■□□□□ 0.68
RABGGTA-219ENST00000560871 DOK7Q18PE1 504 aa19.33■□□□□ 0.68
RABGGTA-219ENST00000560871 ATG9AQ7Z3C6 839 aa19.33■□□□□ 0.68
RABGGTA-219ENST00000560871 FBXO3Q9UK99 471 aa19.33■□□□□ 0.68
RABGGTA-219ENST00000560871 PNMA6EA0A0J9YXQ4 647 aa19.32■□□□□ 0.68
RABGGTA-219ENST00000560871 PSMD14O00487 310 aa19.32■□□□□ 0.68
RABGGTA-219ENST00000560871 CIAO1O76071 339 aa19.32■□□□□ 0.68
RABGGTA-219ENST00000560871 DPF2Q92785 391 aa19.32■□□□□ 0.68
RABGGTA-219ENST00000560871 KCNQ5Q9NR82 932 aa19.32■□□□□ 0.68
RABGGTA-219ENST00000560871 DDX19BQ9UMR2 479 aa19.32■□□□□ 0.68
RABGGTA-219ENST00000560871 PA2G4Q9UQ80 394 aaKnown RBP19.32■□□□□ 0.68
RABGGTA-219ENST00000560871 TMEM88BA6NKF7 163 aa19.31■□□□□ 0.68
RABGGTA-219ENST00000560871 KCNJ4P48050 445 aa19.31■□□□□ 0.68
RABGGTA-219ENST00000560871 UBE4AQ14139 1066 aa19.31■□□□□ 0.68
RABGGTA-219ENST00000560871 METTL24Q5JXM2 366 aa19.31■□□□□ 0.68
RABGGTA-219ENST00000560871 PGAP2Q9UHJ9 254 aa19.31■□□□□ 0.68
RABGGTA-219ENST00000560871 CNOT7Q9UIV1 285 aaKnown RBP19.31■□□□□ 0.68
RABGGTA-219ENST00000560871 ZBTB12Q9Y330 459 aaPredicted RBP19.31■□□□□ 0.68
RABGGTA-219ENST00000560871 ZNF609O15014 1411 aa19.31■□□□□ 0.68
RABGGTA-219ENST00000560871 PDE8BO95263 885 aa19.3■□□□□ 0.68
RABGGTA-219ENST00000560871 POLA2Q14181 598 aa19.3■□□□□ 0.68
RABGGTA-219ENST00000560871 PODNQ7Z5L7 613 aa19.3■□□□□ 0.68
RABGGTA-219ENST00000560871 SIL1Q9H173 461 aa19.3■□□□□ 0.68
RABGGTA-219ENST00000560871 HIRAP54198 1017 aaPredicted RBP19.29■□□□□ 0.68
RABGGTA-219ENST00000560871 CEP85Q6P2H3 762 aa19.29■□□□□ 0.68
RABGGTA-219ENST00000560871 SSH3Q8TE77 659 aa19.29■□□□□ 0.68
RABGGTA-219ENST00000560871 COA1Q9GZY4 146 aa19.29■□□□□ 0.68
RABGGTA-219ENST00000560871 ZBTB40Q9NUA8 1239 aa19.29■□□□□ 0.68
RABGGTA-219ENST00000560871 SHTN1A0MZ66 631 aa19.28■□□□□ 0.68
RABGGTA-219ENST00000560871 G3V3G9 751 aa19.28■□□□□ 0.68
RABGGTA-219ENST00000560871 H7C1D1 291 aa19.28■□□□□ 0.68
RABGGTA-219ENST00000560871 VIL1P09327 827 aaKnown RBP19.28■□□□□ 0.68
RABGGTA-219ENST00000560871 RPS12P25398 132 aaKnown RBP19.28■□□□□ 0.68
RABGGTA-219ENST00000560871 IL15P40933 162 aaPredicted RBP19.28■□□□□ 0.68
RABGGTA-219ENST00000560871 DCAF8Q5TAQ9 597 aa19.28■□□□□ 0.68
RABGGTA-219ENST00000560871 MICALL2Q8IY33 904 aa19.28■□□□□ 0.68
RABGGTA-219ENST00000560871 MKRN1Q9UHC7 482 aaKnown RBP19.28■□□□□ 0.68
RABGGTA-219ENST00000560871 CNTNAP1P78357 1384 aa19.28■□□□□ 0.68
RABGGTA-219ENST00000560871 FGFR2P21802 821 aa19.27■□□□□ 0.68
RABGGTA-219ENST00000560871 ATP8B2P98198 1209 aa19.27■□□□□ 0.68
RABGGTA-219ENST00000560871 FMR1Q06787 632 aaKnown RBP eCLIP19.27■□□□□ 0.68
RABGGTA-219ENST00000560871 TRPM4Q8TD43 1214 aa19.27■□□□□ 0.68
RABGGTA-219ENST00000560871 ZC3H15Q8WU90 426 aaKnown RBP19.27■□□□□ 0.68
RABGGTA-219ENST00000560871 ARAP2Q8WZ64 1704 aa19.27■□□□□ 0.68
RABGGTA-219ENST00000560871 POLR2AP24928 1970 aaKnown RBP19.26■□□□□ 0.67
RABGGTA-219ENST00000560871 PUM3Q15397 648 aaKnown RBP19.26■□□□□ 0.67
RABGGTA-219ENST00000560871 CD209Q9NNX6 404 aa19.26■□□□□ 0.67
RABGGTA-219ENST00000560871 TRAF5O00463 557 aa19.24■□□□□ 0.67
RABGGTA-219ENST00000560871 IL1R1P14778 569 aa19.24■□□□□ 0.67
RABGGTA-219ENST00000560871 DACT2Q5SW24 774 aa19.24■□□□□ 0.67
RABGGTA-219ENST00000560871 SAMD7Q7Z3H4 446 aa19.24■□□□□ 0.67
RABGGTA-219ENST00000560871 ZNF804AQ7Z570 1209 aa19.24■□□□□ 0.67
RABGGTA-219ENST00000560871 CHMP4BQ9H444 224 aaKnown RBP19.24■□□□□ 0.67
RABGGTA-219ENST00000560871 USP17L3A6NCW0 530 aa19.23■□□□□ 0.67
RABGGTA-219ENST00000560871 USP17L4A6NCW7 530 aa19.23■□□□□ 0.67
RABGGTA-219ENST00000560871 RASSF10A6NK89 507 aa19.23■□□□□ 0.67
RABGGTA-219ENST00000560871 GYG1P46976 350 aa19.23■□□□□ 0.67
RABGGTA-219ENST00000560871 CST9Q5W186 159 aa19.23■□□□□ 0.67
RABGGTA-219ENST00000560871 RSBN1LQ6PCB5 846 aaPredicted RBP19.23■□□□□ 0.67
RABGGTA-219ENST00000560871 USP17L1Q7RTZ2 530 aa19.23■□□□□ 0.67
RABGGTA-219ENST00000560871 AGBL3Q8NEM8 1001 aa19.23■□□□□ 0.67
RABGGTA-219ENST00000560871 FAM84BQ96KN1 310 aaPredicted RBP19.23■□□□□ 0.67
RABGGTA-219ENST00000560871 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.23■□□□□ 0.67
RABGGTA-219ENST00000560871 EGFRP00533 1210 aa19.22■□□□□ 0.67
RABGGTA-219ENST00000560871 DEFB115Q30KQ5 88 aa19.22■□□□□ 0.67
RABGGTA-219ENST00000560871 TBC1D10BQ4KMP7 808 aaPredicted RBP19.22■□□□□ 0.67
RABGGTA-219ENST00000560871 STRIP1Q5VSL9 837 aa19.22■□□□□ 0.67
RABGGTA-219ENST00000560871 CDC37L1Q7L3B6 337 aa19.22■□□□□ 0.67
RABGGTA-219ENST00000560871 FBXO33Q7Z6M2 555 aa19.22■□□□□ 0.67
RABGGTA-219ENST00000560871 LPIN2Q92539 896 aa19.22■□□□□ 0.67
RABGGTA-219ENST00000560871 GMLQ99445 158 aa19.22■□□□□ 0.67
RABGGTA-219ENST00000560871 GLIS2Q9BZE0 524 aaPredicted RBP19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms