RNA–Protein interactions for RNA: ENST00000560861.1

SNX1-212, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-212ENST00000560861 WTIPA6NIX2 430 aaPredicted RBP13.73□□□□□ -0.21
SNX1-212ENST00000560861 PHKA1P46020 1223 aa13.73□□□□□ -0.21
SNX1-212ENST00000560861 MFAP1P55081 439 aaKnown RBP13.73□□□□□ -0.21
SNX1-212ENST00000560861 CCDC158Q5M9N0 1113 aa13.73□□□□□ -0.21
SNX1-212ENST00000560861 CCDC102BQ68D86 513 aa13.73□□□□□ -0.21
SNX1-212ENST00000560861 RPGRQ92834 1020 aaKnown RBP13.73□□□□□ -0.21
SNX1-212ENST00000560861 ANKRD2Q9GZV1 360 aa13.73□□□□□ -0.21
SNX1-212ENST00000560861 CACNA1SQ13698 1873 aa13.72□□□□□ -0.21
SNX1-212ENST00000560861 DUOX1Q9NRD9 1551 aa13.72□□□□□ -0.21
SNX1-212ENST00000560861 BBOX1O75936 387 aa13.72□□□□□ -0.21
SNX1-212ENST00000560861 IFIT1P09914 478 aaKnown RBP13.72□□□□□ -0.21
SNX1-212ENST00000560861 NPR1P16066 1061 aa13.72□□□□□ -0.21
SNX1-212ENST00000560861 PDE6BP35913 854 aa13.72□□□□□ -0.21
SNX1-212ENST00000560861 MCAMP43121 646 aa13.72□□□□□ -0.21
SNX1-212ENST00000560861 RBM25P49756 843 aaKnown RBP13.72□□□□□ -0.21
SNX1-212ENST00000560861 TTC39AQ5SRH9 613 aa13.72□□□□□ -0.21
SNX1-212ENST00000560861 KBTBD3Q8NAB2 608 aa13.72□□□□□ -0.21
SNX1-212ENST00000560861 NDUFB9Q9Y6M9 179 aa13.72□□□□□ -0.21
SNX1-212ENST00000560861 MYH13Q9UKX3 1938 aa13.72□□□□□ -0.21
SNX1-212ENST00000560861 SGSM2O43147 1006 aa13.71□□□□□ -0.21
SNX1-212ENST00000560861 EIF5BO60841 1220 aaKnown RBP13.71□□□□□ -0.21
SNX1-212ENST00000560861 UQCRFS1P1P0C7P4 283 aa13.71□□□□□ -0.21
SNX1-212ENST00000560861 CASC1Q6TDU7 716 aa13.71□□□□□ -0.21
SNX1-212ENST00000560861 USP26Q9BXU7 913 aa13.71□□□□□ -0.21
SNX1-212ENST00000560861 PAG1Q9NWQ8 432 aa13.71□□□□□ -0.21
SNX1-212ENST00000560861 COL1A1P02452 1464 aaPredicted RBP13.71□□□□□ -0.21
SNX1-212ENST00000560861 SLX4Q8IY92 1834 aa13.71□□□□□ -0.22
SNX1-212ENST00000560861 MED23Q9ULK4 1368 aa13.71□□□□□ -0.22
SNX1-212ENST00000560861 XDHP47989 1333 aa13.7□□□□□ -0.22
SNX1-212ENST00000560861 GORABQ5T7V8 394 aa13.7□□□□□ -0.22
SNX1-212ENST00000560861 PI16Q6UXB8 463 aa13.7□□□□□ -0.22
SNX1-212ENST00000560861 C15orf52Q6ZUT6 534 aaKnown RBP13.7□□□□□ -0.22
SNX1-212ENST00000560861 TMC4Q7Z404 712 aa13.7□□□□□ -0.22
SNX1-212ENST00000560861 FBXO33Q7Z6M2 555 aa13.7□□□□□ -0.22
SNX1-212ENST00000560861 DNAJC2Q99543 621 aaKnown RBP13.7□□□□□ -0.22
SNX1-212ENST00000560861 FSD1Q9BTV5 496 aa13.7□□□□□ -0.22
SNX1-212ENST00000560861 C22orf23Q9BZE7 217 aa13.7□□□□□ -0.22
SNX1-212ENST00000560861 ANTXR1Q9H6X2 564 aa13.7□□□□□ -0.22
SNX1-212ENST00000560861 PODXL2Q9NZ53 605 aa13.7□□□□□ -0.22
SNX1-212ENST00000560861 HMG20BQ9P0W2 317 aa13.7□□□□□ -0.22
SNX1-212ENST00000560861 RAD50Q92878 1312 aa13.69□□□□□ -0.22
SNX1-212ENST00000560861 HIP1O00291 1037 aa13.69□□□□□ -0.22
SNX1-212ENST00000560861 GOLIM4O00461 696 aa13.69□□□□□ -0.22
SNX1-212ENST00000560861 EPB41L2O43491 1005 aaKnown RBP13.69□□□□□ -0.22
SNX1-212ENST00000560861 KLRK1P26718 216 aa13.69□□□□□ -0.22
SNX1-212ENST00000560861 ZAP70P43403 619 aa13.69□□□□□ -0.22
SNX1-212ENST00000560861 BCAMP50895 628 aa13.69□□□□□ -0.22
SNX1-212ENST00000560861 GPSM2P81274 684 aa13.69□□□□□ -0.22
SNX1-212ENST00000560861 NMIQ13287 307 aaPredicted RBP13.69□□□□□ -0.22
SNX1-212ENST00000560861 RASGRF1Q13972 1273 aa13.69□□□□□ -0.22
SNX1-212ENST00000560861 STYK1Q6J9G0 422 aa13.69□□□□□ -0.22
SNX1-212ENST00000560861 MASTLQ96GX5 879 aa13.69□□□□□ -0.22
SNX1-212ENST00000560861 FAM84BQ96KN1 310 aaPredicted RBP13.69□□□□□ -0.22
SNX1-212ENST00000560861 LEMD3Q9Y2U8 911 aa13.69□□□□□ -0.22
SNX1-212ENST00000560861 SNED1Q8TER0 1413 aa13.69□□□□□ -0.22
SNX1-212ENST00000560861 A0A0D9SFI3 127 aa13.68□□□□□ -0.22
SNX1-212ENST00000560861 REC8O95072 547 aa13.68□□□□□ -0.22
SNX1-212ENST00000560861 SP8Q8IXZ3 490 aa13.68□□□□□ -0.22
SNX1-212ENST00000560861 FAM227BQ96M60 508 aa13.68□□□□□ -0.22
SNX1-212ENST00000560861 KIF2CQ99661 725 aa13.68□□□□□ -0.22
SNX1-212ENST00000560861 LSG1Q9H089 658 aaKnown RBP13.68□□□□□ -0.22
SNX1-212ENST00000560861 UPF2Q9HAU5 1272 aaKnown RBP13.68□□□□□ -0.22
SNX1-212ENST00000560861 DIAPH3Q9NSV4 1193 aa13.68□□□□□ -0.22
SNX1-212ENST00000560861 ATP6V0A2Q9Y487 856 aa13.68□□□□□ -0.22
SNX1-212ENST00000560861 PDS5AQ29RF7 1337 aaKnown RBP13.67□□□□□ -0.22
SNX1-212ENST00000560861 PPEF1O14829 653 aaPredicted RBP13.67□□□□□ -0.22
SNX1-212ENST00000560861 CHGBP05060 677 aa13.67□□□□□ -0.22
SNX1-212ENST00000560861 CYP2E1P05181 493 aaPredicted RBP13.67□□□□□ -0.22
SNX1-212ENST00000560861 GYG1P46976 350 aa13.67□□□□□ -0.22
SNX1-212ENST00000560861 TXNRD3Q86VQ6 643 aa13.67□□□□□ -0.22
SNX1-212ENST00000560861 C2CD5Q86YS7 1000 aa13.67□□□□□ -0.22
SNX1-212ENST00000560861 SPATA5Q8NB90 893 aa13.67□□□□□ -0.22
SNX1-212ENST00000560861 IL17RAQ96F46 866 aa13.67□□□□□ -0.22
SNX1-212ENST00000560861 PIH1D3Q9NQM4 214 aaKnown RBP13.67□□□□□ -0.22
SNX1-212ENST00000560861 BRCA1P38398 1863 aaKnown RBP13.66□□□□□ -0.22
SNX1-212ENST00000560861 ALDH1B1P30837 517 aa13.66□□□□□ -0.22
SNX1-212ENST00000560861 ZMYM1Q5SVZ6 1142 aa13.66□□□□□ -0.22
SNX1-212ENST00000560861 CWC27Q6UX04 472 aaKnown RBP13.66□□□□□ -0.22
SNX1-212ENST00000560861 RUFY2Q8WXA3 655 aa13.66□□□□□ -0.22
SNX1-212ENST00000560861 SGIP1Q9BQI5 828 aa13.66□□□□□ -0.22
SNX1-212ENST00000560861 MAST2Q6P0Q8 1798 aa13.66□□□□□ -0.22
SNX1-212ENST00000560861 CHD4Q14839 1912 aa13.65□□□□□ -0.22
SNX1-212ENST00000560861 H0YIN7 160 aa13.65□□□□□ -0.22
SNX1-212ENST00000560861 SEMA3EO15041 775 aa13.65□□□□□ -0.22
SNX1-212ENST00000560861 RNF113AO15541 343 aaKnown RBP13.65□□□□□ -0.22
SNX1-212ENST00000560861 ATP2B4P23634 1241 aa13.65□□□□□ -0.22
SNX1-212ENST00000560861 CHRNA5P30532 468 aa13.65□□□□□ -0.22
SNX1-212ENST00000560861 FKBP4Q02790 459 aaKnown RBP eCLIP13.65□□□□□ -0.22
SNX1-212ENST00000560861 C7orf43Q8WVR3 580 aa13.65□□□□□ -0.22
SNX1-212ENST00000560861 MTFR1LQ9H019 292 aa13.65□□□□□ -0.22
SNX1-212ENST00000560861 UTRNP46939 3433 aa13.64□□□□□ -0.23
SNX1-212ENST00000560861 ZFYP08048 801 aaPredicted RBP13.64□□□□□ -0.23
SNX1-212ENST00000560861 KCNJ4P48050 445 aa13.64□□□□□ -0.23
SNX1-212ENST00000560861 TTF1Q15361 905 aaPredicted RBP13.64□□□□□ -0.23
SNX1-212ENST00000560861 ZNF589Q86UQ0 364 aaPredicted RBP13.64□□□□□ -0.23
SNX1-212ENST00000560861 TBC1D16Q8TBP0 767 aa13.64□□□□□ -0.23
SNX1-212ENST00000560861 HELLSQ9NRZ9 838 aa13.64□□□□□ -0.23
SNX1-212ENST00000560861 POLLQ9UGP5 575 aa13.64□□□□□ -0.23
SNX1-212ENST00000560861 ZNF646O15015 1829 aaPredicted RBP13.64□□□□□ -0.23
SNX1-212ENST00000560861 CCDC171Q6TFL3 1326 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms