RNA–Protein interactions for RNA: ENST00000560496.5

SNRPA1-212, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-212ENST00000560496 AKAP11Q9UKA4 1901 aa13□□□□□ -0.33
SNRPA1-212ENST00000560496 IRS2Q9Y4H2 1338 aa12.99□□□□□ -0.33
SNRPA1-212ENST00000560496 CCT4P50991 539 aaKnown RBP12.99□□□□□ -0.33
SNRPA1-212ENST00000560496 AGBL3Q8NEM8 1001 aa12.99□□□□□ -0.33
SNRPA1-212ENST00000560496 SALL2Q9Y467 1007 aaPredicted RBP12.99□□□□□ -0.33
SNRPA1-212ENST00000560496 CASP8AP2Q9UKL3 1982 aa12.98□□□□□ -0.33
SNRPA1-212ENST00000560496 ZNF521Q96K83 1311 aa12.98□□□□□ -0.33
SNRPA1-212ENST00000560496 CSF1RP07333 972 aa12.98□□□□□ -0.33
SNRPA1-212ENST00000560496 ITGA6P23229 1130 aa12.98□□□□□ -0.33
SNRPA1-212ENST00000560496 KLRK1P26718 216 aa12.98□□□□□ -0.33
SNRPA1-212ENST00000560496 MAP2K2P36507 400 aa12.98□□□□□ -0.33
SNRPA1-212ENST00000560496 BRPF1P55201 1214 aaPredicted RBP12.98□□□□□ -0.33
SNRPA1-212ENST00000560496 RBM26Q5T8P6 1007 aaKnown RBP12.98□□□□□ -0.33
SNRPA1-212ENST00000560496 TXNRD3Q86VQ6 643 aa12.98□□□□□ -0.33
SNRPA1-212ENST00000560496 LINS1Q8NG48 757 aa12.98□□□□□ -0.33
SNRPA1-212ENST00000560496 MYH16Q9H6N6 1097 aa12.98□□□□□ -0.33
SNRPA1-212ENST00000560496 USP17L3A6NCW0 530 aa12.97□□□□□ -0.33
SNRPA1-212ENST00000560496 USP17L4A6NCW7 530 aa12.97□□□□□ -0.33
SNRPA1-212ENST00000560496 FAM155AB1AL88 458 aaPredicted RBP12.97□□□□□ -0.33
SNRPA1-212ENST00000560496 HUNKP57058 714 aa12.97□□□□□ -0.33
SNRPA1-212ENST00000560496 DACT2Q5SW24 774 aa12.97□□□□□ -0.33
SNRPA1-212ENST00000560496 USP17L1Q7RTZ2 530 aa12.97□□□□□ -0.33
SNRPA1-212ENST00000560496 PODNQ7Z5L7 613 aa12.97□□□□□ -0.33
SNRPA1-212ENST00000560496 ZIC5Q96T25 663 aa12.97□□□□□ -0.33
SNRPA1-212ENST00000560496 GBA2Q9HCG7 927 aaPredicted RBP12.97□□□□□ -0.33
SNRPA1-212ENST00000560496 TSKSQ9UJT2 592 aa12.97□□□□□ -0.33
SNRPA1-212ENST00000560496 OTOFQ9HC10 1997 aa12.97□□□□□ -0.33
SNRPA1-212ENST00000560496 PITPNM2Q9BZ72 1349 aa12.96□□□□□ -0.33
SNRPA1-212ENST00000560496 F6X3S4 739 aa12.96□□□□□ -0.33
SNRPA1-212ENST00000560496 G3V3G9 751 aa12.96□□□□□ -0.33
SNRPA1-212ENST00000560496 IGHMBP2P38935 993 aaKnown RBP12.96□□□□□ -0.33
SNRPA1-212ENST00000560496 BEND3Q5T5X7 828 aa12.96□□□□□ -0.33
SNRPA1-212ENST00000560496 DCAF8Q5TAQ9 597 aa12.96□□□□□ -0.33
SNRPA1-212ENST00000560496 ANGEL2Q5VTE6 544 aaKnown RBP12.96□□□□□ -0.33
SNRPA1-212ENST00000560496 DCPSQ96C86 337 aaKnown RBP12.96□□□□□ -0.33
SNRPA1-212ENST00000560496 CDCA5Q96FF9 252 aa12.96□□□□□ -0.33
SNRPA1-212ENST00000560496 MXD3Q9BW11 206 aa12.96□□□□□ -0.33
SNRPA1-212ENST00000560496 MYOZ2Q9NPC6 264 aa12.96□□□□□ -0.33
SNRPA1-212ENST00000560496 FOXO4P98177 505 aa12.95□□□□□ -0.34
SNRPA1-212ENST00000560496 NOGQ13253 232 aa12.95□□□□□ -0.34
SNRPA1-212ENST00000560496 ZNF804BA4D1E1 1349 aa12.94□□□□□ -0.34
SNRPA1-212ENST00000560496 MYO3BQ8WXR4 1341 aa12.94□□□□□ -0.34
SNRPA1-212ENST00000560496 MYH13Q9UKX3 1938 aa12.94□□□□□ -0.34
SNRPA1-212ENST00000560496 HTTP42858 3142 aa12.94□□□□□ -0.34
SNRPA1-212ENST00000560496 SLC10A3P09131 477 aa12.94□□□□□ -0.34
SNRPA1-212ENST00000560496 USP17L8P0C7I0 530 aa12.94□□□□□ -0.34
SNRPA1-212ENST00000560496 CHRNDQ07001 517 aa12.94□□□□□ -0.34
SNRPA1-212ENST00000560496 SCARF1Q14162 830 aa12.94□□□□□ -0.34
SNRPA1-212ENST00000560496 RGMBQ6NW40 437 aa12.94□□□□□ -0.34
SNRPA1-212ENST00000560496 SULF1Q8IWU6 871 aa12.94□□□□□ -0.34
SNRPA1-212ENST00000560496 COA1Q9GZY4 146 aa12.94□□□□□ -0.34
SNRPA1-212ENST00000560496 LEMD3Q9Y2U8 911 aa12.94□□□□□ -0.34
SNRPA1-212ENST00000560496 TNRC18O15417 2968 aaPredicted RBP12.94□□□□□ -0.34
SNRPA1-212ENST00000560496 SSC5DA1L4H1 1573 aa12.94□□□□□ -0.34
SNRPA1-212ENST00000560496 COL1A1P02452 1464 aaPredicted RBP12.93□□□□□ -0.34
SNRPA1-212ENST00000560496 SNAP23O00161 211 aa12.93□□□□□ -0.34
SNRPA1-212ENST00000560496 CA12O43570 354 aa12.93□□□□□ -0.34
SNRPA1-212ENST00000560496 EPHA10Q5JZY3 1008 aa12.93□□□□□ -0.34
SNRPA1-212ENST00000560496 STRIP1Q5VSL9 837 aa12.93□□□□□ -0.34
SNRPA1-212ENST00000560496 FAM9BQ8IZU0 186 aa12.93□□□□□ -0.34
SNRPA1-212ENST00000560496 BEGAINQ9BUH8 593 aa12.93□□□□□ -0.34
SNRPA1-212ENST00000560496 SCAF8Q9UPN6 1271 aaKnown RBP12.93□□□□□ -0.34
SNRPA1-212ENST00000560496 NBPF9Q3BBW0 867 aa12.92□□□□□ -0.34
SNRPA1-212ENST00000560496 RASAL3Q86YV0 1011 aa12.92□□□□□ -0.34
SNRPA1-212ENST00000560496 C2orf69Q8N8R5 385 aa12.92□□□□□ -0.34
SNRPA1-212ENST00000560496 ABHD8Q96I13 439 aa12.92□□□□□ -0.34
SNRPA1-212ENST00000560496 MPHOSPH8Q99549 860 aa12.92□□□□□ -0.34
SNRPA1-212ENST00000560496 ANKRD2Q9GZV1 360 aa12.92□□□□□ -0.34
SNRPA1-212ENST00000560496 ANKRD18BA2A2Z9 1011 aa12.91□□□□□ -0.34
SNRPA1-212ENST00000560496 GRM8O00222 908 aa12.91□□□□□ -0.34
SNRPA1-212ENST00000560496 WNT10BO00744 389 aa12.91□□□□□ -0.34
SNRPA1-212ENST00000560496 SASH1O94885 1247 aa12.91□□□□□ -0.34
SNRPA1-212ENST00000560496 POTEHQ6S545 545 aa12.91□□□□□ -0.34
SNRPA1-212ENST00000560496 C15orf52Q6ZUT6 534 aaKnown RBP12.91□□□□□ -0.34
SNRPA1-212ENST00000560496 FBXW7Q969H0 707 aa12.91□□□□□ -0.34
SNRPA1-212ENST00000560496 ZBED3Q96IU2 234 aaPredicted RBP12.91□□□□□ -0.34
SNRPA1-212ENST00000560496 ZNF157P51786 506 aaPredicted RBP12.9□□□□□ -0.34
SNRPA1-212ENST00000560496 LMBR1LQ6UX01 489 aa12.9□□□□□ -0.34
SNRPA1-212ENST00000560496 CERS5Q8N5B7 392 aa12.9□□□□□ -0.34
SNRPA1-212ENST00000560496 CD209Q9NNX6 404 aa12.9□□□□□ -0.34
SNRPA1-212ENST00000560496 TAF5LO75529 589 aa12.89□□□□□ -0.35
SNRPA1-212ENST00000560496 FKBP1BP68106 108 aa12.89□□□□□ -0.35
SNRPA1-212ENST00000560496 GTF2IP78347 998 aa12.89□□□□□ -0.35
SNRPA1-212ENST00000560496 KIF23Q02241 960 aaPredicted RBP12.89□□□□□ -0.35
SNRPA1-212ENST00000560496 IFIT5Q13325 482 aaKnown RBP12.89□□□□□ -0.35
SNRPA1-212ENST00000560496 MOB2Q70IA6 237 aa12.89□□□□□ -0.35
SNRPA1-212ENST00000560496 KIAA0825Q8IV33 1275 aa12.89□□□□□ -0.35
SNRPA1-212ENST00000560496 HELBQ8NG08 1087 aaPredicted RBP12.89□□□□□ -0.35
SNRPA1-212ENST00000560496 KAZALD1Q96I82 304 aa12.89□□□□□ -0.35
SNRPA1-212ENST00000560496 ZNF594Q96JF6 807 aaPredicted RBP12.89□□□□□ -0.35
SNRPA1-212ENST00000560496 SAGE1Q9NXZ1 904 aa12.89□□□□□ -0.35
SNRPA1-212ENST00000560496 CHMP3Q9Y3E7 222 aa12.89□□□□□ -0.35
SNRPA1-212ENST00000560496 UTYO14607 1347 aa12.88□□□□□ -0.35
SNRPA1-212ENST00000560496 CENPFP49454 3210 aa12.88□□□□□ -0.35
SNRPA1-212ENST00000560496 ALDH1L1O75891 902 aa12.88□□□□□ -0.35
SNRPA1-212ENST00000560496 KCNJ4P48050 445 aa12.88□□□□□ -0.35
SNRPA1-212ENST00000560496 PRAMEF18Q5VWM3 479 aa12.88□□□□□ -0.35
SNRPA1-212ENST00000560496 TTLL5Q6EMB2 1281 aa12.88□□□□□ -0.35
SNRPA1-212ENST00000560496 CCDC102AQ96A19 550 aa12.88□□□□□ -0.35
SNRPA1-212ENST00000560496 SUCLG2Q96I99 432 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms