RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 BRCA1P38398 1863 aaKnown RBP11.59□□□□□ -0.55
HERC1-206ENST00000559996 MROH5Q6ZUA9 1318 aa11.59□□□□□ -0.55
HERC1-206ENST00000559996 LRRC37AA6NMS7 1700 aa11.58□□□□□ -0.56
HERC1-206ENST00000559996 GPSM2P81274 684 aa11.58□□□□□ -0.56
HERC1-206ENST00000559996 TNNI3KQ59H18 835 aa11.58□□□□□ -0.56
HERC1-206ENST00000559996 PRPF40BQ6NWY9 871 aaKnown RBP11.58□□□□□ -0.56
HERC1-206ENST00000559996 ERC1Q8IUD2 1116 aa11.58□□□□□ -0.56
HERC1-206ENST00000559996 PLEKHM2Q8IWE5 1019 aa11.58□□□□□ -0.56
HERC1-206ENST00000559996 PLCD3Q8N3E9 789 aa11.58□□□□□ -0.56
HERC1-206ENST00000559996 CNKSR1Q969H4 720 aa11.58□□□□□ -0.56
HERC1-206ENST00000559996 FHDC1Q9C0D6 1143 aaPredicted RBP11.58□□□□□ -0.56
HERC1-206ENST00000559996 TLR7Q9NYK1 1049 aaKnown RBP11.58□□□□□ -0.56
HERC1-206ENST00000559996 PODXL2Q9NZ53 605 aa11.58□□□□□ -0.56
HERC1-206ENST00000559996 CEP126Q9P2H0 1117 aa11.58□□□□□ -0.56
HERC1-206ENST00000559996 POLLQ9UGP5 575 aa11.58□□□□□ -0.56
HERC1-206ENST00000559996 FPGT-TNNI3KV9GXZ4 949 aa11.58□□□□□ -0.56
HERC1-206ENST00000559996 LTBP1Q14766 1721 aa11.57□□□□□ -0.56
HERC1-206ENST00000559996 PPEF1O14829 653 aaPredicted RBP11.57□□□□□ -0.56
HERC1-206ENST00000559996 METTL24Q5JXM2 366 aa11.57□□□□□ -0.56
HERC1-206ENST00000559996 TTLL6Q8N841 843 aa11.57□□□□□ -0.56
HERC1-206ENST00000559996 SYT17Q9BSW7 474 aa11.57□□□□□ -0.56
HERC1-206ENST00000559996 CCDC8Q9H0W5 538 aaPredicted RBP11.57□□□□□ -0.56
HERC1-206ENST00000559996 A0A1B0GUL7 405 aa11.56□□□□□ -0.56
HERC1-206ENST00000559996 ADORA1P30542 326 aa11.56□□□□□ -0.56
HERC1-206ENST00000559996 OS9Q13438 667 aaPredicted RBP11.56□□□□□ -0.56
HERC1-206ENST00000559996 UBE4AQ14139 1066 aa11.56□□□□□ -0.56
HERC1-206ENST00000559996 TMC4Q7Z404 712 aa11.56□□□□□ -0.56
HERC1-206ENST00000559996 TXNRD3Q86VQ6 643 aa11.56□□□□□ -0.56
HERC1-206ENST00000559996 RASEFQ8IZ41 740 aa11.56□□□□□ -0.56
HERC1-206ENST00000559996 DBNDD2Q9BQY9 259 aa11.56□□□□□ -0.56
HERC1-206ENST00000559996 PIM2Q9P1W9 311 aa11.56□□□□□ -0.56
HERC1-206ENST00000559996 STAP2Q9UGK3 403 aa11.56□□□□□ -0.56
HERC1-206ENST00000559996 DBNLQ9UJU6 430 aaKnown RBP11.56□□□□□ -0.56
HERC1-206ENST00000559996 DUOX1Q9NRD9 1551 aa11.55□□□□□ -0.56
HERC1-206ENST00000559996 ZNF609O15014 1411 aa11.55□□□□□ -0.56
HERC1-206ENST00000559996 KLRK1P26718 216 aa11.55□□□□□ -0.56
HERC1-206ENST00000559996 C15orf52Q6ZUT6 534 aaKnown RBP11.55□□□□□ -0.56
HERC1-206ENST00000559996 CLASRPQ8N2M8 674 aaKnown RBP11.55□□□□□ -0.56
HERC1-206ENST00000559996 SLC39A7Q92504 469 aa11.55□□□□□ -0.56
HERC1-206ENST00000559996 KIF12Q96FN5 646 aa11.55□□□□□ -0.56
HERC1-206ENST00000559996 RTFDC1Q9BY42 306 aaPredicted RBP11.55□□□□□ -0.56
HERC1-206ENST00000559996 ANKRD2Q9GZV1 360 aa11.55□□□□□ -0.56
HERC1-206ENST00000559996 OSBPL3Q9H4L5 887 aa11.55□□□□□ -0.56
HERC1-206ENST00000559996 PPP1R1BQ9UD71 204 aaPredicted RBP11.55□□□□□ -0.56
HERC1-206ENST00000559996 CACNA1SQ13698 1873 aa11.55□□□□□ -0.56
HERC1-206ENST00000559996 C21orf2O43822 256 aa11.54□□□□□ -0.56
HERC1-206ENST00000559996 PDE1AP54750 535 aa11.54□□□□□ -0.56
HERC1-206ENST00000559996 PUM3Q15397 648 aaKnown RBP11.54□□□□□ -0.56
HERC1-206ENST00000559996 ATP2B3Q16720 1220 aa11.54□□□□□ -0.56
HERC1-206ENST00000559996 FBXO33Q7Z6M2 555 aa11.54□□□□□ -0.56
HERC1-206ENST00000559996 AACSQ86V21 672 aa11.54□□□□□ -0.56
HERC1-206ENST00000559996 TBC1D16Q8TBP0 767 aa11.54□□□□□ -0.56
HERC1-206ENST00000559996 PI4K2BQ8TCG2 481 aa11.54□□□□□ -0.56
HERC1-206ENST00000559996 LPIN2Q92539 896 aa11.54□□□□□ -0.56
HERC1-206ENST00000559996 XAGE2Q96GT9 111 aa11.54□□□□□ -0.56
HERC1-206ENST00000559996 FAM84BQ96KN1 310 aaPredicted RBP11.54□□□□□ -0.56
HERC1-206ENST00000559996 NSFL1CQ9UNZ2 370 aaKnown RBP11.54□□□□□ -0.56
HERC1-206ENST00000559996 AKAP2Q9Y2D5 859 aa11.54□□□□□ -0.56
HERC1-206ENST00000559996 LEMD3Q9Y2U8 911 aa11.54□□□□□ -0.56
HERC1-206ENST00000559996 XDHP47989 1333 aa11.54□□□□□ -0.56
HERC1-206ENST00000559996 ATP2B4P23634 1241 aa11.53□□□□□ -0.56
HERC1-206ENST00000559996 TSHZ3Q63HK5 1081 aa11.53□□□□□ -0.56
HERC1-206ENST00000559996 MPNDQ8N594 471 aa11.53□□□□□ -0.56
HERC1-206ENST00000559996 GPR101Q96P66 508 aaPredicted RBP11.53□□□□□ -0.56
HERC1-206ENST00000559996 WWC3Q9ULE0 1092 aa11.53□□□□□ -0.56
HERC1-206ENST00000559996 ZNF804BA4D1E1 1349 aa11.53□□□□□ -0.56
HERC1-206ENST00000559996 C7P10643 843 aa11.52□□□□□ -0.57
HERC1-206ENST00000559996 BCAMP50895 628 aa11.52□□□□□ -0.57
HERC1-206ENST00000559996 PRELPP51888 382 aa11.52□□□□□ -0.57
HERC1-206ENST00000559996 ATN1P54259 1190 aaPredicted RBP11.52□□□□□ -0.57
HERC1-206ENST00000559996 DALRD3Q5D0E6 543 aaKnown RBP11.52□□□□□ -0.57
HERC1-206ENST00000559996 CC2D2BQ6DHV5 1058 aa11.52□□□□□ -0.57
HERC1-206ENST00000559996 KLHL34Q8N239 644 aa11.52□□□□□ -0.57
HERC1-206ENST00000559996 NEUROD6Q96NK8 337 aa11.52□□□□□ -0.57
HERC1-206ENST00000559996 ANKIB1Q9P2G1 1089 aa11.52□□□□□ -0.57
HERC1-206ENST00000559996 ARAP2Q8WZ64 1704 aa11.52□□□□□ -0.57
HERC1-206ENST00000559996 MAP3K13O43283 966 aa11.51□□□□□ -0.57
HERC1-206ENST00000559996 IFIT2P09913 472 aaKnown RBP11.51□□□□□ -0.57
HERC1-206ENST00000559996 GSPT1P15170 499 aaKnown RBP11.51□□□□□ -0.57
HERC1-206ENST00000559996 MX1P20591 662 aa11.51□□□□□ -0.57
HERC1-206ENST00000559996 PHKA1P46020 1223 aa11.51□□□□□ -0.57
HERC1-206ENST00000559996 GYG1P46976 350 aa11.51□□□□□ -0.57
HERC1-206ENST00000559996 RGS3P49796 1198 aa11.51□□□□□ -0.57
HERC1-206ENST00000559996 SCARF1Q14162 830 aa11.51□□□□□ -0.57
HERC1-206ENST00000559996 CCDC102BQ68D86 513 aa11.51□□□□□ -0.57
HERC1-206ENST00000559996 ZNF512BQ96KM6 892 aaPredicted RBP11.51□□□□□ -0.57
HERC1-206ENST00000559996 BCL11AQ9H165 835 aa11.51□□□□□ -0.57
HERC1-206ENST00000559996 GGA1Q9UJY5 639 aa11.51□□□□□ -0.57
HERC1-206ENST00000559996 TRPC6Q9Y210 931 aa11.51□□□□□ -0.57
HERC1-206ENST00000559996 SRCAPQ6ZRS2 3230 aa11.51□□□□□ -0.57
HERC1-206ENST00000559996 AKAP11Q9UKA4 1901 aa11.5□□□□□ -0.57
HERC1-206ENST00000559996 NFKBIEO00221 500 aa11.5□□□□□ -0.57
HERC1-206ENST00000559996 IFIT1P09914 478 aaKnown RBP11.5□□□□□ -0.57
HERC1-206ENST00000559996 SLC5A1P13866 664 aa11.5□□□□□ -0.57
HERC1-206ENST00000559996 ATP5JP18859 108 aa11.5□□□□□ -0.57
HERC1-206ENST00000559996 ARID4AP29374 1257 aaPredicted RBP11.5□□□□□ -0.57
HERC1-206ENST00000559996 DPP8Q6V1X1 898 aaPredicted RBP11.5□□□□□ -0.57
HERC1-206ENST00000559996 PSMD1Q99460 953 aa11.5□□□□□ -0.57
HERC1-206ENST00000559996 ECHDC1Q9NTX5 307 aa11.5□□□□□ -0.57
HERC1-206ENST00000559996 BCS1LQ9Y276 419 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms