RNA–Protein interactions for RNA: ENST00000559822.1

SPG11-219, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-219ENST00000559822 MYO3BQ8WXR4 1341 aa15.59■□□□□ 0.09
SPG11-219ENST00000559822 ANKRD18BA2A2Z9 1011 aa15.58■□□□□ 0.08
SPG11-219ENST00000559822 CA12O43570 354 aa15.58■□□□□ 0.08
SPG11-219ENST00000559822 KCNJ4P48050 445 aa15.58■□□□□ 0.08
SPG11-219ENST00000559822 HUNKP57058 714 aa15.58■□□□□ 0.08
SPG11-219ENST00000559822 C2orf69Q8N8R5 385 aa15.58■□□□□ 0.08
SPG11-219ENST00000559822 GBA2Q9HCG7 927 aaPredicted RBP15.58■□□□□ 0.08
SPG11-219ENST00000559822 GGA3Q9NZ52 723 aa15.58■□□□□ 0.08
SPG11-219ENST00000559822 MMP14P50281 582 aa15.57■□□□□ 0.08
SPG11-219ENST00000559822 NOGQ13253 232 aa15.57■□□□□ 0.08
SPG11-219ENST00000559822 BEND3Q5T5X7 828 aa15.57■□□□□ 0.08
SPG11-219ENST00000559822 OGFOD1Q8N543 542 aa15.57■□□□□ 0.08
SPG11-219ENST00000559822 GMLQ99445 158 aa15.57■□□□□ 0.08
SPG11-219ENST00000559822 MYOZ2Q9NPC6 264 aa15.57■□□□□ 0.08
SPG11-219ENST00000559822 SPINK5Q9NQ38 1064 aaPredicted RBP15.57■□□□□ 0.08
SPG11-219ENST00000559822 ZNF804BA4D1E1 1349 aa15.57■□□□□ 0.08
SPG11-219ENST00000559822 ADM5C9JUS6 153 aa15.56■□□□□ 0.08
SPG11-219ENST00000559822 F6X3S4 739 aa15.56■□□□□ 0.08
SPG11-219ENST00000559822 AOC2O75106 756 aa15.56■□□□□ 0.08
SPG11-219ENST00000559822 BRPF1P55201 1214 aaPredicted RBP15.56■□□□□ 0.08
SPG11-219ENST00000559822 IFIT5Q13325 482 aaKnown RBP15.56■□□□□ 0.08
SPG11-219ENST00000559822 SCARF1Q14162 830 aa15.56■□□□□ 0.08
SPG11-219ENST00000559822 STRIP1Q5VSL9 837 aa15.56■□□□□ 0.08
SPG11-219ENST00000559822 PITPNM2Q9BZ72 1349 aa15.56■□□□□ 0.08
SPG11-219ENST00000559822 ANGEL2Q5VTE6 544 aaKnown RBP15.55■□□□□ 0.08
SPG11-219ENST00000559822 RGMBQ6NW40 437 aa15.55■□□□□ 0.08
SPG11-219ENST00000559822 FBXW7Q969H0 707 aa15.55■□□□□ 0.08
SPG11-219ENST00000559822 C9orf78Q9NZ63 289 aaPredicted RBP15.55■□□□□ 0.08
SPG11-219ENST00000559822 CHMP3Q9Y3E7 222 aa15.55■□□□□ 0.08
SPG11-219ENST00000559822 POLR2AP24928 1970 aaKnown RBP15.55■□□□□ 0.08
SPG11-219ENST00000559822 GRM8O00222 908 aa15.54■□□□□ 0.08
SPG11-219ENST00000559822 ALDH1L1O75891 902 aa15.54■□□□□ 0.08
SPG11-219ENST00000559822 CHRNDQ07001 517 aa15.54■□□□□ 0.08
SPG11-219ENST00000559822 DACT2Q5SW24 774 aa15.54■□□□□ 0.08
SPG11-219ENST00000559822 CCDC102AQ96A19 550 aa15.54■□□□□ 0.08
SPG11-219ENST00000559822 WTIPA6NIX2 430 aaPredicted RBP15.53■□□□□ 0.08
SPG11-219ENST00000559822 FKBP1BP68106 108 aa15.53■□□□□ 0.08
SPG11-219ENST00000559822 FOXO4P98177 505 aa15.53■□□□□ 0.08
SPG11-219ENST00000559822 CCDC57Q2TAC2 916 aa15.53■□□□□ 0.08
SPG11-219ENST00000559822 TAF7LQ5H9L4 462 aa15.53■□□□□ 0.08
SPG11-219ENST00000559822 TTLL5Q6EMB2 1281 aa15.53■□□□□ 0.08
SPG11-219ENST00000559822 CDCA5Q96FF9 252 aa15.53■□□□□ 0.08
SPG11-219ENST00000559822 SRCIN1Q9C0H9 1055 aa15.53■□□□□ 0.08
SPG11-219ENST00000559822 HDAC9Q9UKV0 1011 aa15.53■□□□□ 0.08
SPG11-219ENST00000559822 ASTN2O75129 1339 aaPredicted RBP15.52■□□□□ 0.08
SPG11-219ENST00000559822 ZNF521Q96K83 1311 aa15.52■□□□□ 0.08
SPG11-219ENST00000559822 SLC4A10Q6U841 1118 aa15.52■□□□□ 0.08
SPG11-219ENST00000559822 LMBR1LQ6UX01 489 aa15.52■□□□□ 0.08
SPG11-219ENST00000559822 DLK2Q6UY11 383 aa15.52■□□□□ 0.08
SPG11-219ENST00000559822 TXNRD3Q86VQ6 643 aa15.52■□□□□ 0.08
SPG11-219ENST00000559822 E9PSI1 815 aa15.51■□□□□ 0.07
SPG11-219ENST00000559822 ZNF157P51786 506 aaPredicted RBP15.51■□□□□ 0.07
SPG11-219ENST00000559822 C15orf52Q6ZUT6 534 aaKnown RBP15.51■□□□□ 0.07
SPG11-219ENST00000559822 ZNF804AQ7Z570 1209 aa15.51■□□□□ 0.07
SPG11-219ENST00000559822 PAPPA2Q9BXP8 1791 aa15.5■□□□□ 0.07
SPG11-219ENST00000559822 LDHAL6AQ6ZMR3 332 aa15.5■□□□□ 0.07
SPG11-219ENST00000559822 CD209Q9NNX6 404 aa15.5■□□□□ 0.07
SPG11-219ENST00000559822 CNNM1Q9NRU3 951 aa15.5■□□□□ 0.07
SPG11-219ENST00000559822 ZNF646O15015 1829 aaPredicted RBP15.5■□□□□ 0.07
SPG11-219ENST00000559822 PTPRCP08575 1304 aa15.49■□□□□ 0.07
SPG11-219ENST00000559822 WNT10BO00744 389 aa15.49■□□□□ 0.07
SPG11-219ENST00000559822 TAF5LO75529 589 aa15.49■□□□□ 0.07
SPG11-219ENST00000559822 KLRK1P26718 216 aa15.49■□□□□ 0.07
SPG11-219ENST00000559822 NF2P35240 595 aa15.49■□□□□ 0.07
SPG11-219ENST00000559822 GTF2IP78347 998 aa15.49■□□□□ 0.07
SPG11-219ENST00000559822 NBPF9Q3BBW0 867 aa15.49■□□□□ 0.07
SPG11-219ENST00000559822 MXD3Q9BW11 206 aa15.49■□□□□ 0.07
SPG11-219ENST00000559822 FAM155AB1AL88 458 aaPredicted RBP15.48■□□□□ 0.07
SPG11-219ENST00000559822 SLC10A3P09131 477 aa15.48■□□□□ 0.07
SPG11-219ENST00000559822 APOBEC3FQ8IUX4 373 aaKnown RBP15.48■□□□□ 0.07
SPG11-219ENST00000559822 KIAA0825Q8IV33 1275 aa15.48■□□□□ 0.07
SPG11-219ENST00000559822 REM2Q8IYK8 340 aaPredicted RBP15.48■□□□□ 0.07
SPG11-219ENST00000559822 HELBQ8NG08 1087 aaPredicted RBP15.48■□□□□ 0.07
SPG11-219ENST00000559822 SAGE1Q9NXZ1 904 aa15.48■□□□□ 0.07
SPG11-219ENST00000559822 TSKSQ9UJT2 592 aa15.48■□□□□ 0.07
SPG11-219ENST00000559822 A0A1B0GUL6 1792 aa15.48■□□□□ 0.07
SPG11-219ENST00000559822 EPHA10Q5JZY3 1008 aa15.47■□□□□ 0.07
SPG11-219ENST00000559822 UTYO14607 1347 aa15.46■□□□□ 0.07
SPG11-219ENST00000559822 IRS2Q9Y4H2 1338 aa15.46■□□□□ 0.07
SPG11-219ENST00000559822 SASH1O94885 1247 aa15.46■□□□□ 0.07
SPG11-219ENST00000559822 IL1R1P14778 569 aa15.46■□□□□ 0.07
SPG11-219ENST00000559822 FKBP1AP62942 108 aaKnown RBP15.46■□□□□ 0.07
SPG11-219ENST00000559822 KIF23Q02241 960 aaPredicted RBP15.46■□□□□ 0.07
SPG11-219ENST00000559822 MRPL50Q8N5N7 158 aaKnown RBP15.46■□□□□ 0.07
SPG11-219ENST00000559822 ABHD8Q96I13 439 aa15.46■□□□□ 0.07
SPG11-219ENST00000559822 ZNF594Q96JF6 807 aaPredicted RBP15.46■□□□□ 0.07
SPG11-219ENST00000559822 ZIC5Q96T25 663 aa15.46■□□□□ 0.07
SPG11-219ENST00000559822 COL1A1P02452 1464 aaPredicted RBP15.46■□□□□ 0.06
SPG11-219ENST00000559822 PLIN1O60240 522 aa15.45■□□□□ 0.06
SPG11-219ENST00000559822 UBE4AQ14139 1066 aa15.45■□□□□ 0.06
SPG11-219ENST00000559822 TTLL12Q14166 644 aaPredicted RBP15.45■□□□□ 0.06
SPG11-219ENST00000559822 DLGAP5Q15398 846 aa15.45■□□□□ 0.06
SPG11-219ENST00000559822 SUCLG2Q96I99 432 aa15.45■□□□□ 0.06
SPG11-219ENST00000559822 MROH5Q6ZUA9 1318 aa15.44■□□□□ 0.06
SPG11-219ENST00000559822 SNAP23O00161 211 aa15.44■□□□□ 0.06
SPG11-219ENST00000559822 MYO1BO43795 1136 aa15.44■□□□□ 0.06
SPG11-219ENST00000559822 NBPF7P0C2Y1 421 aaPredicted RBP15.44■□□□□ 0.06
SPG11-219ENST00000559822 SLFN5Q08AF3 891 aa15.44■□□□□ 0.06
SPG11-219ENST00000559822 RASAL3Q86YV0 1011 aa15.44■□□□□ 0.06
SPG11-219ENST00000559822 MTMR14Q8NCE2 650 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms