RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 IL16Q14005 1332 aa16.81■□□□□ 0.28
TPM1-220ENST00000559556 USP17L8P0C7I0 530 aa16.81■□□□□ 0.28
TPM1-220ENST00000559556 RGS19P49795 217 aa16.81■□□□□ 0.28
TPM1-220ENST00000559556 ZNF157P51786 506 aaPredicted RBP16.81■□□□□ 0.28
TPM1-220ENST00000559556 SCARF1Q14162 830 aa16.81■□□□□ 0.28
TPM1-220ENST00000559556 CWF19L2Q2TBE0 894 aaKnown RBP16.81■□□□□ 0.28
TPM1-220ENST00000559556 TWISTNBQ3B726 338 aaPredicted RBP16.81■□□□□ 0.28
TPM1-220ENST00000559556 FAM161AQ3B820 660 aa16.81■□□□□ 0.28
TPM1-220ENST00000559556 ANGEL2Q5VTE6 544 aaKnown RBP16.81■□□□□ 0.28
TPM1-220ENST00000559556 WWC1Q8IX03 1113 aa16.81■□□□□ 0.28
TPM1-220ENST00000559556 MINPP1Q9UNW1 487 aa16.81■□□□□ 0.28
TPM1-220ENST00000559556 WTIPA6NIX2 430 aaPredicted RBP16.8■□□□□ 0.28
TPM1-220ENST00000559556 CCDC85CA6NKD9 419 aa16.8■□□□□ 0.28
TPM1-220ENST00000559556 CCT4P50991 539 aaKnown RBP16.8■□□□□ 0.28
TPM1-220ENST00000559556 CCDC184Q52MB2 194 aa16.8■□□□□ 0.28
TPM1-220ENST00000559556 G2E3Q7L622 706 aa16.8■□□□□ 0.28
TPM1-220ENST00000559556 UBE3BQ7Z3V4 1068 aa16.8■□□□□ 0.28
TPM1-220ENST00000559556 H7C1W4 665 aa16.79■□□□□ 0.28
TPM1-220ENST00000559556 FKBP1BP68106 108 aa16.79■□□□□ 0.28
TPM1-220ENST00000559556 KIF23Q02241 960 aaPredicted RBP16.79■□□□□ 0.28
TPM1-220ENST00000559556 NCBP3Q53F19 620 aaKnown RBP16.79■□□□□ 0.28
TPM1-220ENST00000559556 DACT2Q5SW24 774 aa16.79■□□□□ 0.28
TPM1-220ENST00000559556 PLA2G12BQ9BX93 195 aa16.79■□□□□ 0.28
TPM1-220ENST00000559556 MYO3BQ8WXR4 1341 aa16.78■□□□□ 0.28
TPM1-220ENST00000559556 DGKZQ13574 1117 aa16.78■□□□□ 0.28
TPM1-220ENST00000559556 RASAL3Q86YV0 1011 aa16.78■□□□□ 0.28
TPM1-220ENST00000559556 RBBP6Q7Z6E9 1792 aaKnown RBP16.78■□□□□ 0.28
TPM1-220ENST00000559556 KIAA0100Q14667 2235 aaKnown RBP16.77■□□□□ 0.28
TPM1-220ENST00000559556 SLC4A2P04920 1241 aa16.77■□□□□ 0.28
TPM1-220ENST00000559556 CASP7P55210 303 aa16.77■□□□□ 0.28
TPM1-220ENST00000559556 FLIIQ13045 1269 aa16.77■□□□□ 0.28
TPM1-220ENST00000559556 GCKRQ14397 625 aa16.77■□□□□ 0.28
TPM1-220ENST00000559556 IGHMBP2P38935 993 aaKnown RBP16.76■□□□□ 0.27
TPM1-220ENST00000559556 MLLT1Q03111 559 aaPredicted RBP16.76■□□□□ 0.27
TPM1-220ENST00000559556 STRIP1Q5VSL9 837 aa16.76■□□□□ 0.27
TPM1-220ENST00000559556 REM2Q8IYK8 340 aaPredicted RBP16.76■□□□□ 0.27
TPM1-220ENST00000559556 CSRNP1Q96S65 589 aa16.76■□□□□ 0.27
TPM1-220ENST00000559556 COA1Q9GZY4 146 aa16.76■□□□□ 0.27
TPM1-220ENST00000559556 MYH16Q9H6N6 1097 aa16.76■□□□□ 0.27
TPM1-220ENST00000559556 RNF186Q9NXI6 227 aa16.76■□□□□ 0.27
TPM1-220ENST00000559556 LEMD3Q9Y2U8 911 aa16.76■□□□□ 0.27
TPM1-220ENST00000559556 FANCIQ9NVI1 1328 aa16.75■□□□□ 0.27
TPM1-220ENST00000559556 COL1A1P02452 1464 aaPredicted RBP16.75■□□□□ 0.27
TPM1-220ENST00000559556 TRPA1O75762 1119 aa16.75■□□□□ 0.27
TPM1-220ENST00000559556 ITGA6P23229 1130 aa16.75■□□□□ 0.27
TPM1-220ENST00000559556 MMP14P50281 582 aa16.75■□□□□ 0.27
TPM1-220ENST00000559556 NBPF9Q3BBW0 867 aa16.75■□□□□ 0.27
TPM1-220ENST00000559556 TXNRD3Q86VQ6 643 aa16.75■□□□□ 0.27
TPM1-220ENST00000559556 DNAAF4Q8WXU2 420 aa16.75■□□□□ 0.27
TPM1-220ENST00000559556 AK9Q5TCS8 1911 aa16.74■□□□□ 0.27
TPM1-220ENST00000559556 ZNF804BA4D1E1 1349 aa16.74■□□□□ 0.27
TPM1-220ENST00000559556 WNT10BO00744 389 aa16.74■□□□□ 0.27
TPM1-220ENST00000559556 CSF1RP07333 972 aa16.74■□□□□ 0.27
TPM1-220ENST00000559556 FKBP5Q13451 457 aaPredicted RBP16.74■□□□□ 0.27
TPM1-220ENST00000559556 OGFOD1Q8N543 542 aa16.74■□□□□ 0.27
TPM1-220ENST00000559556 LINS1Q8NG48 757 aa16.74■□□□□ 0.27
TPM1-220ENST00000559556 MXD3Q9BW11 206 aa16.74■□□□□ 0.27
TPM1-220ENST00000559556 ANKRD2Q9GZV1 360 aa16.74■□□□□ 0.27
TPM1-220ENST00000559556 MKI67P46013 3256 aaKnown RBP16.74■□□□□ 0.27
TPM1-220ENST00000559556 SCAF8Q9UPN6 1271 aaKnown RBP16.73■□□□□ 0.27
TPM1-220ENST00000559556 IRS2Q9Y4H2 1338 aa16.72■□□□□ 0.27
TPM1-220ENST00000559556 BRCA2P51587 3418 aa16.72■□□□□ 0.27
TPM1-220ENST00000559556 KLRK1P26718 216 aa16.72■□□□□ 0.27
TPM1-220ENST00000559556 MOB2Q70IA6 237 aa16.72■□□□□ 0.27
TPM1-220ENST00000559556 FBXW7Q969H0 707 aa16.72■□□□□ 0.27
TPM1-220ENST00000559556 MPHOSPH8Q99549 860 aa16.72■□□□□ 0.27
TPM1-220ENST00000559556 CHRNDQ07001 517 aa16.71■□□□□ 0.27
TPM1-220ENST00000559556 TTLL5Q6EMB2 1281 aa16.71■□□□□ 0.27
TPM1-220ENST00000559556 APOBEC3FQ8IUX4 373 aaKnown RBP16.71■□□□□ 0.27
TPM1-220ENST00000559556 VAMP4O75379 141 aa16.7■□□□□ 0.26
TPM1-220ENST00000559556 SASH1O94885 1247 aa16.7■□□□□ 0.26
TPM1-220ENST00000559556 WDR63Q8IWG1 891 aa16.7■□□□□ 0.26
TPM1-220ENST00000559556 ZBED3Q96IU2 234 aaPredicted RBP16.7■□□□□ 0.26
TPM1-220ENST00000559556 ANKRD18BA2A2Z9 1011 aa16.69■□□□□ 0.26
TPM1-220ENST00000559556 UBE2Q2LH0YL09 131 aa16.69■□□□□ 0.26
TPM1-220ENST00000559556 NF2P35240 595 aa16.69■□□□□ 0.26
TPM1-220ENST00000559556 PRAMEF18Q5VWM3 479 aa16.69■□□□□ 0.26
TPM1-220ENST00000559556 C15orf52Q6ZUT6 534 aaKnown RBP16.69■□□□□ 0.26
TPM1-220ENST00000559556 KIAA0825Q8IV33 1275 aa16.69■□□□□ 0.26
TPM1-220ENST00000559556 HDAC9Q9UKV0 1011 aa16.69■□□□□ 0.26
TPM1-220ENST00000559556 SSC5DA1L4H1 1573 aa16.68■□□□□ 0.26
TPM1-220ENST00000559556 CEP290O15078 2479 aa16.68■□□□□ 0.26
TPM1-220ENST00000559556 KCNJ4P48050 445 aa16.68■□□□□ 0.26
TPM1-220ENST00000559556 GTF2IP78347 998 aa16.68■□□□□ 0.26
TPM1-220ENST00000559556 FOXO4P98177 505 aa16.68■□□□□ 0.26
TPM1-220ENST00000559556 CTU1Q7Z7A3 348 aaKnown RBP16.68■□□□□ 0.26
TPM1-220ENST00000559556 MRS2Q9HD23 443 aa16.68■□□□□ 0.26
TPM1-220ENST00000559556 EXOSC9Q06265 439 aaKnown RBP16.67■□□□□ 0.26
TPM1-220ENST00000559556 TTLL12Q14166 644 aaPredicted RBP16.67■□□□□ 0.26
TPM1-220ENST00000559556 MTMR14Q8NCE2 650 aa16.67■□□□□ 0.26
TPM1-220ENST00000559556 CD209Q9NNX6 404 aa16.67■□□□□ 0.26
TPM1-220ENST00000559556 F6X3S4 739 aa16.66■□□□□ 0.26
TPM1-220ENST00000559556 SNAP23O00161 211 aa16.66■□□□□ 0.26
TPM1-220ENST00000559556 TM4SF4P48230 202 aa16.66■□□□□ 0.26
TPM1-220ENST00000559556 IFIT5Q13325 482 aaKnown RBP16.66■□□□□ 0.26
TPM1-220ENST00000559556 BEND3Q5T5X7 828 aa16.66■□□□□ 0.26
TPM1-220ENST00000559556 CERS5Q8N5B7 392 aa16.66■□□□□ 0.26
TPM1-220ENST00000559556 IL1R1P14778 569 aa16.65■□□□□ 0.26
TPM1-220ENST00000559556 NOM1Q5C9Z4 860 aaKnown RBP16.65■□□□□ 0.26
TPM1-220ENST00000559556 ZNF804AQ7Z570 1209 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms