RNA–Protein interactions for RNA: ENST00000558796.2

PBX1-213, Transcript of PBX homeobox 1, humanhuman

TSL 5

Gene PBX1, Length 366 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-213ENST00000558796 ADARB2Q9NS39 739 aaKnown RBP13.81□□□□□ -0.2
PBX1-213ENST00000558796 LRRFIP2Q9Y608 721 aaKnown RBP13.81□□□□□ -0.2
PBX1-213ENST00000558796 ZKSCAN2Q63HK3 967 aa13.8□□□□□ -0.2
PBX1-213ENST00000558796 USP50Q70EL3 339 aaPredicted RBP13.8□□□□□ -0.2
PBX1-213ENST00000558796 TRPM4Q8TD43 1214 aa13.8□□□□□ -0.2
PBX1-213ENST00000558796 CNOT7Q9UIV1 285 aaKnown RBP13.8□□□□□ -0.2
PBX1-213ENST00000558796 PCNTO95613 3336 aa13.8□□□□□ -0.2
PBX1-213ENST00000558796 VIL1P09327 827 aaKnown RBP13.79□□□□□ -0.2
PBX1-213ENST00000558796 RPS12P25398 132 aaKnown RBP13.79□□□□□ -0.2
PBX1-213ENST00000558796 LRRC24Q50LG9 513 aa13.79□□□□□ -0.2
PBX1-213ENST00000558796 PODNQ7Z5L7 613 aa13.79□□□□□ -0.2
PBX1-213ENST00000558796 COA1Q9GZY4 146 aa13.79□□□□□ -0.2
PBX1-213ENST00000558796 IRS2Q9Y4H2 1338 aa13.79□□□□□ -0.2
PBX1-213ENST00000558796 ZNF609O15014 1411 aa13.79□□□□□ -0.2
PBX1-213ENST00000558796 USP17L3A6NCW0 530 aa13.78□□□□□ -0.2
PBX1-213ENST00000558796 USP17L4A6NCW7 530 aa13.78□□□□□ -0.2
PBX1-213ENST00000558796 H7C1D1 291 aa13.78□□□□□ -0.2
PBX1-213ENST00000558796 RSBN1LQ6PCB5 846 aaPredicted RBP13.78□□□□□ -0.2
PBX1-213ENST00000558796 USP17L1Q7RTZ2 530 aa13.78□□□□□ -0.2
PBX1-213ENST00000558796 SAMD7Q7Z3H4 446 aa13.78□□□□□ -0.2
PBX1-213ENST00000558796 TMEM57Q8N5G2 664 aa13.78□□□□□ -0.2
PBX1-213ENST00000558796 DPF2Q92785 391 aa13.78□□□□□ -0.2
PBX1-213ENST00000558796 MXD3Q9BW11 206 aa13.78□□□□□ -0.2
PBX1-213ENST00000558796 RIPOR2Q9Y4F9 1068 aa13.78□□□□□ -0.2
PBX1-213ENST00000558796 PASKQ96RG2 1323 aa13.78□□□□□ -0.2
PBX1-213ENST00000558796 EGFRP00533 1210 aa13.77□□□□□ -0.21
PBX1-213ENST00000558796 RFX5P48382 616 aaPredicted RBP13.77□□□□□ -0.21
PBX1-213ENST00000558796 HIRAP54198 1017 aaPredicted RBP13.77□□□□□ -0.21
PBX1-213ENST00000558796 TBC1D10BQ4KMP7 808 aaPredicted RBP13.77□□□□□ -0.21
PBX1-213ENST00000558796 METTL24Q5JXM2 366 aa13.77□□□□□ -0.21
PBX1-213ENST00000558796 MROH5Q6ZUA9 1318 aa13.77□□□□□ -0.21
PBX1-213ENST00000558796 FTSJ3Q8IY81 847 aaKnown RBP13.77□□□□□ -0.21
PBX1-213ENST00000558796 CNTROBQ8N137 903 aa13.77□□□□□ -0.21
PBX1-213ENST00000558796 SIL1Q9H173 461 aa13.77□□□□□ -0.21
PBX1-213ENST00000558796 ITGBL1O95965 494 aaPredicted RBP13.76□□□□□ -0.21
PBX1-213ENST00000558796 GNAI3P08754 354 aa13.76□□□□□ -0.21
PBX1-213ENST00000558796 RBM26Q5T8P6 1007 aaKnown RBP13.76□□□□□ -0.21
PBX1-213ENST00000558796 C15orf52Q6ZUT6 534 aaKnown RBP13.76□□□□□ -0.21
PBX1-213ENST00000558796 ZNF804AQ7Z570 1209 aa13.76□□□□□ -0.21
PBX1-213ENST00000558796 AGBL3Q8NEM8 1001 aa13.76□□□□□ -0.21
PBX1-213ENST00000558796 CD209Q9NNX6 404 aa13.76□□□□□ -0.21
PBX1-213ENST00000558796 RLBP1P12271 317 aa13.75□□□□□ -0.21
PBX1-213ENST00000558796 GYG1P46976 350 aa13.75□□□□□ -0.21
PBX1-213ENST00000558796 GTF2IP78347 998 aa13.75□□□□□ -0.21
PBX1-213ENST00000558796 PTPN12Q05209 780 aaKnown RBP13.75□□□□□ -0.21
PBX1-213ENST00000558796 FMR1Q06787 632 aaKnown RBP eCLIP13.75□□□□□ -0.21
PBX1-213ENST00000558796 UBE4AQ14139 1066 aa13.75□□□□□ -0.21
PBX1-213ENST00000558796 KIF4BQ2VIQ3 1234 aa13.75□□□□□ -0.21
PBX1-213ENST00000558796 DACT2Q5SW24 774 aa13.75□□□□□ -0.21
PBX1-213ENST00000558796 VGLL2Q8N8G2 317 aa13.75□□□□□ -0.21
PBX1-213ENST00000558796 GMLQ99445 158 aa13.75□□□□□ -0.21
PBX1-213ENST00000558796 PA2G4Q9UQ80 394 aaKnown RBP13.75□□□□□ -0.21
PBX1-213ENST00000558796 HDAC5Q9UQL6 1122 aa13.75□□□□□ -0.21
PBX1-213ENST00000558796 EYA2O00167 538 aa13.74□□□□□ -0.21
PBX1-213ENST00000558796 TRAF5O00463 557 aa13.74□□□□□ -0.21
PBX1-213ENST00000558796 STRIP1Q5VSL9 837 aa13.74□□□□□ -0.21
PBX1-213ENST00000558796 TTLL5Q6EMB2 1281 aa13.74□□□□□ -0.21
PBX1-213ENST00000558796 ITPRIPQ8IWB1 547 aa13.74□□□□□ -0.21
PBX1-213ENST00000558796 DZIP1LQ8IYY4 767 aaKnown RBP13.74□□□□□ -0.21
PBX1-213ENST00000558796 GLIS2Q9BZE0 524 aaPredicted RBP13.74□□□□□ -0.21
PBX1-213ENST00000558796 JAG2Q9Y219 1238 aa13.74□□□□□ -0.21
PBX1-213ENST00000558796 ASTN2O75129 1339 aaPredicted RBP13.73□□□□□ -0.21
PBX1-213ENST00000558796 USP17L8P0C7I0 530 aa13.73□□□□□ -0.21
PBX1-213ENST00000558796 IL1R1P14778 569 aa13.73□□□□□ -0.21
PBX1-213ENST00000558796 ZNF280AP59817 542 aaPredicted RBP13.73□□□□□ -0.21
PBX1-213ENST00000558796 ATG9AQ7Z3C6 839 aa13.73□□□□□ -0.21
PBX1-213ENST00000558796 DNAJC5GQ8N7S2 189 aa13.73□□□□□ -0.21
PBX1-213ENST00000558796 CREBZFQ9NS37 354 aa13.73□□□□□ -0.21
PBX1-213ENST00000558796 MYO3BQ8WXR4 1341 aa13.72□□□□□ -0.21
PBX1-213ENST00000558796 SRGAP3O43295 1099 aa13.72□□□□□ -0.21
PBX1-213ENST00000558796 PDE8BO95263 885 aa13.72□□□□□ -0.21
PBX1-213ENST00000558796 GNAI2P04899 355 aa13.72□□□□□ -0.21
PBX1-213ENST00000558796 PUM3Q15397 648 aaKnown RBP13.72□□□□□ -0.21
PBX1-213ENST00000558796 PANK1Q8TE04 598 aa13.72□□□□□ -0.21
PBX1-213ENST00000558796 YTHDC1Q96MU7 727 aaKnown RBP13.72□□□□□ -0.21
PBX1-213ENST00000558796 C1orf115Q9H7X2 142 aa13.72□□□□□ -0.21
PBX1-213ENST00000558796 MYOZ2Q9NPC6 264 aa13.72□□□□□ -0.21
PBX1-213ENST00000558796 GGA3Q9NZ52 723 aa13.72□□□□□ -0.21
PBX1-213ENST00000558796 RCAN3Q9UKA8 241 aa13.72□□□□□ -0.21
PBX1-213ENST00000558796 TMEM88BA6NKF7 163 aa13.71□□□□□ -0.21
PBX1-213ENST00000558796 HIBADHP31937 336 aaKnown RBP13.71□□□□□ -0.21
PBX1-213ENST00000558796 VPS37DQ86XT2 251 aa13.71□□□□□ -0.21
PBX1-213ENST00000558796 KIAA0825Q8IV33 1275 aa13.71□□□□□ -0.21
PBX1-213ENST00000558796 CERS5Q8N5B7 392 aa13.71□□□□□ -0.21
PBX1-213ENST00000558796 ZC3H15Q8WU90 426 aaKnown RBP13.71□□□□□ -0.21
PBX1-213ENST00000558796 KLRG1Q96E93 195 aa13.71□□□□□ -0.21
PBX1-213ENST00000558796 FAM84BQ96KN1 310 aaPredicted RBP13.71□□□□□ -0.21
PBX1-213ENST00000558796 PGAP2Q9UHJ9 254 aa13.71□□□□□ -0.21
PBX1-213ENST00000558796 IQSEC3Q9UPP2 1182 aaPredicted RBP13.71□□□□□ -0.21
PBX1-213ENST00000558796 PNMA6EA0A0J9YXQ4 647 aa13.7□□□□□ -0.22
PBX1-213ENST00000558796 ADM5C9JUS6 153 aa13.7□□□□□ -0.22
PBX1-213ENST00000558796 CIAO1O76071 339 aa13.7□□□□□ -0.22
PBX1-213ENST00000558796 MTX1Q13505 466 aa13.7□□□□□ -0.22
PBX1-213ENST00000558796 DLK2Q6UY11 383 aa13.7□□□□□ -0.22
PBX1-213ENST00000558796 KRT26Q7Z3Y9 468 aa13.7□□□□□ -0.22
PBX1-213ENST00000558796 ZNF408Q9H9D4 720 aa13.7□□□□□ -0.22
PBX1-213ENST00000558796 COPRSQ9NQ92 184 aa13.7□□□□□ -0.22
PBX1-213ENST00000558796 MKRN1Q9UHC7 482 aaKnown RBP13.7□□□□□ -0.22
PBX1-213ENST00000558796 COL1A1P02452 1464 aaPredicted RBP13.69□□□□□ -0.22
PBX1-213ENST00000558796 MYH2Q9UKX2 1941 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms