RNA–Protein interactions for RNA: ENST00000558440.5

ZEB1-211, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 886 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-211ENST00000558440 ITSN1Q15811 1721 aa8.9□□□□□ -0.98
ZEB1-211ENST00000558440 THSD7AQ9UPZ6 1657 aa8.9□□□□□ -0.98
ZEB1-211ENST00000558440 GPRASP1Q5JY77 1395 aa8.89□□□□□ -0.99
ZEB1-211ENST00000558440 CLUAP1Q96AJ1 413 aa8.89□□□□□ -0.99
ZEB1-211ENST00000558440 PRAM1Q96QH2 718 aa8.89□□□□□ -0.99
ZEB1-211ENST00000558440 MPHOSPH9Q99550 1183 aa8.89□□□□□ -0.99
ZEB1-211ENST00000558440 C14orf93Q9H972 538 aaKnown RBP8.89□□□□□ -0.99
ZEB1-211ENST00000558440 LRRC4BQ9NT99 713 aa8.89□□□□□ -0.99
ZEB1-211ENST00000558440 NDFIP2Q9NV92 336 aa8.89□□□□□ -0.99
ZEB1-211ENST00000558440 ZNF358Q9NW07 568 aa8.89□□□□□ -0.99
ZEB1-211ENST00000558440 POGKQ9P215 609 aa8.89□□□□□ -0.99
ZEB1-211ENST00000558440 ATXN7L1Q9ULK2 861 aaPredicted RBP8.89□□□□□ -0.99
ZEB1-211ENST00000558440 DLC1Q96QB1 1528 aa8.89□□□□□ -0.99
ZEB1-211ENST00000558440 EIF3AQ14152 1382 aaKnown RBP8.88□□□□□ -0.99
ZEB1-211ENST00000558440 USP17L3A6NCW0 530 aa8.88□□□□□ -0.99
ZEB1-211ENST00000558440 USP17L4A6NCW7 530 aa8.88□□□□□ -0.99
ZEB1-211ENST00000558440 ATP9BO43861 1147 aa8.88□□□□□ -0.99
ZEB1-211ENST00000558440 R3HDM1Q15032 1099 aaKnown RBP8.88□□□□□ -0.99
ZEB1-211ENST00000558440 NBPF1Q3BBV0 1214 aa8.88□□□□□ -0.99
ZEB1-211ENST00000558440 CFAP70Q5T0N1 1121 aa8.88□□□□□ -0.99
ZEB1-211ENST00000558440 USP17L2Q6R6M4 530 aa8.88□□□□□ -0.99
ZEB1-211ENST00000558440 USP17L1Q7RTZ2 530 aa8.88□□□□□ -0.99
ZEB1-211ENST00000558440 TRIM50Q86XT4 487 aa8.88□□□□□ -0.99
ZEB1-211ENST00000558440 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.88□□□□□ -0.99
ZEB1-211ENST00000558440 AIDAQ96BJ3 306 aa8.88□□□□□ -0.99
ZEB1-211ENST00000558440 SCARF2Q96GP6 870 aaPredicted RBP8.88□□□□□ -0.99
ZEB1-211ENST00000558440 DNAAF2Q9NVR5 837 aaKnown RBP8.88□□□□□ -0.99
ZEB1-211ENST00000558440 DISP2A7MBM2 1401 aa8.88□□□□□ -0.99
ZEB1-211ENST00000558440 SPATA31A5Q5VU36 1347 aa8.87□□□□□ -0.99
ZEB1-211ENST00000558440 SPATA31A7Q8IWB4 1347 aa8.87□□□□□ -0.99
ZEB1-211ENST00000558440 FOXK2Q01167 660 aa8.87□□□□□ -0.99
ZEB1-211ENST00000558440 FAM182BQ5T319 152 aa8.87□□□□□ -0.99
ZEB1-211ENST00000558440 NLRP8Q86W28 1048 aa8.87□□□□□ -0.99
ZEB1-211ENST00000558440 ABHD17AQ96GS6 310 aa8.87□□□□□ -0.99
ZEB1-211ENST00000558440 OXCT2Q9BYC2 517 aaPredicted RBP8.87□□□□□ -0.99
ZEB1-211ENST00000558440 ZDHHC3Q9NYG2 299 aa8.87□□□□□ -0.99
ZEB1-211ENST00000558440 CABP1Q9NZU7 370 aa8.87□□□□□ -0.99
ZEB1-211ENST00000558440 RREB1Q92766 1687 aa8.87□□□□□ -0.99
ZEB1-211ENST00000558440 PHRF1Q9P1Y6 1649 aaKnown RBP8.87□□□□□ -0.99
ZEB1-211ENST00000558440 TULP4Q9NRJ4 1543 aa8.86□□□□□ -0.99
ZEB1-211ENST00000558440 BNIP3LO60238 219 aa8.86□□□□□ -0.99
ZEB1-211ENST00000558440 EPHA4P54764 986 aa8.86□□□□□ -0.99
ZEB1-211ENST00000558440 KANK3Q6NY19 840 aa8.86□□□□□ -0.99
ZEB1-211ENST00000558440 FIGNL1Q6PIW4 674 aa8.86□□□□□ -0.99
ZEB1-211ENST00000558440 SCHIP1Q9P0W5 487 aaPredicted RBP8.86□□□□□ -0.99
ZEB1-211ENST00000558440 NUP188Q5SRE5 1749 aa8.85□□□□□ -0.99
ZEB1-211ENST00000558440 ACIN1Q9UKV3 1341 aaKnown RBP8.85□□□□□ -0.99
ZEB1-211ENST00000558440 OIP5O43482 229 aa8.85□□□□□ -0.99
ZEB1-211ENST00000558440 TATP17735 454 aaPredicted RBP8.85□□□□□ -0.99
ZEB1-211ENST00000558440 FGFR3P22607 806 aa8.85□□□□□ -0.99
ZEB1-211ENST00000558440 ATP1A2P50993 1020 aa8.85□□□□□ -0.99
ZEB1-211ENST00000558440 CLDN10P78369 228 aa8.85□□□□□ -0.99
ZEB1-211ENST00000558440 EZH2Q15910 746 aaKnown RBP8.85□□□□□ -0.99
ZEB1-211ENST00000558440 KLRG1Q96E93 195 aa8.85□□□□□ -0.99
ZEB1-211ENST00000558440 HIRIP3Q9BW71 556 aaPredicted RBP8.85□□□□□ -0.99
ZEB1-211ENST00000558440 ZCCHC2Q9C0B9 1178 aaKnown RBP8.85□□□□□ -0.99
ZEB1-211ENST00000558440 PRDM11Q9NQV5 511 aa8.85□□□□□ -0.99
ZEB1-211ENST00000558440 KIAA1024Q9UPX6 916 aa8.85□□□□□ -0.99
ZEB1-211ENST00000558440 A0A1W2PNR3 127 aa8.84□□□□□ -0.99
ZEB1-211ENST00000558440 ADGRB1O14514 1584 aa8.84□□□□□ -0.99
ZEB1-211ENST00000558440 ZBTB7BO15156 539 aaPredicted RBP8.84□□□□□ -0.99
ZEB1-211ENST00000558440 TRIM37O94972 964 aa8.84□□□□□ -0.99
ZEB1-211ENST00000558440 FAM196AQ6ZSG2 479 aa8.84□□□□□ -0.99
ZEB1-211ENST00000558440 NGDNQ8NEJ9 315 aaKnown RBP8.84□□□□□ -0.99
ZEB1-211ENST00000558440 TPCN2Q8NHX9 752 aa8.84□□□□□ -0.99
ZEB1-211ENST00000558440 GLMNQ92990 594 aa8.84□□□□□ -0.99
ZEB1-211ENST00000558440 TRAK1Q9UPV9 953 aa8.84□□□□□ -0.99
ZEB1-211ENST00000558440 PCDHGC4Q9Y5F7 938 aa8.84□□□□□ -0.99
ZEB1-211ENST00000558440 PARD3Q8TEW0 1356 aa8.84□□□□□ -0.99
ZEB1-211ENST00000558440 SPATA31A1Q5TZJ5 1347 aa8.83□□□□□ -1
ZEB1-211ENST00000558440 ARHGEF28Q8N1W1 1705 aaKnown RBP8.83□□□□□ -1
ZEB1-211ENST00000558440 APBA3O96018 575 aa8.83□□□□□ -1
ZEB1-211ENST00000558440 BMP4P12644 408 aa8.83□□□□□ -1
ZEB1-211ENST00000558440 ARSJQ5FYB0 599 aaPredicted RBP8.83□□□□□ -1
ZEB1-211ENST00000558440 CCDC102BQ68D86 513 aa8.83□□□□□ -1
ZEB1-211ENST00000558440 SLC9A9Q8IVB4 645 aa8.83□□□□□ -1
ZEB1-211ENST00000558440 NEDD1Q8NHV4 660 aa8.83□□□□□ -1
ZEB1-211ENST00000558440 ZDHHC1Q8WTX9 485 aa8.83□□□□□ -1
ZEB1-211ENST00000558440 STRN4Q9NRL3 753 aa8.83□□□□□ -1
ZEB1-211ENST00000558440 GDF2Q9UK05 429 aaPredicted RBP8.83□□□□□ -1
ZEB1-211ENST00000558440 PARP3Q9Y6F1 533 aa8.83□□□□□ -1
ZEB1-211ENST00000558440 PRR36Q9H6K5 1346 aa8.82□□□□□ -1
ZEB1-211ENST00000558440 A6NJR5 290 aa8.82□□□□□ -1
ZEB1-211ENST00000558440 C2CD2LO14523 706 aa8.82□□□□□ -1
ZEB1-211ENST00000558440 ATXN7O15265 892 aaPredicted RBP8.82□□□□□ -1
ZEB1-211ENST00000558440 CTBSQ01459 385 aa8.82□□□□□ -1
ZEB1-211ENST00000558440 TEAD4Q15561 434 aa8.82□□□□□ -1
ZEB1-211ENST00000558440 NBPF8Q3BBV2 869 aa8.82□□□□□ -1
ZEB1-211ENST00000558440 TNS4Q8IZW8 715 aa8.82□□□□□ -1
ZEB1-211ENST00000558440 OGFOD1Q8N543 542 aa8.82□□□□□ -1
ZEB1-211ENST00000558440 CAMKK2Q96RR4 588 aa8.82□□□□□ -1
ZEB1-211ENST00000558440 ZIC5Q96T25 663 aa8.82□□□□□ -1
ZEB1-211ENST00000558440 MKRN1Q9UHC7 482 aaKnown RBP8.82□□□□□ -1
ZEB1-211ENST00000558440 KIAA0232Q92628 1395 aa8.82□□□□□ -1
ZEB1-211ENST00000558440 ATP7BP35670 1465 aa8.82□□□□□ -1
ZEB1-211ENST00000558440 SBF2Q86WG5 1849 aa8.82□□□□□ -1
ZEB1-211ENST00000558440 YY1P25490 414 aa8.81□□□□□ -1
ZEB1-211ENST00000558440 TXLNAP40222 546 aa8.81□□□□□ -1
ZEB1-211ENST00000558440 PDE3BQ13370 1112 aa8.81□□□□□ -1
ZEB1-211ENST00000558440 CHRNA2Q15822 529 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 317 ms