RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 PTF1AQ7RTS3 328 aa12.55□□□□□ -0.4
TPM1-210ENST00000558264 RNF214Q8ND24 703 aa12.55□□□□□ -0.4
TPM1-210ENST00000558264 C8orf37Q96NL8 207 aa12.55□□□□□ -0.4
TPM1-210ENST00000558264 PUS7LQ9H0K6 701 aaKnown RBP12.55□□□□□ -0.4
TPM1-210ENST00000558264 RRAGDQ9NQL2 400 aaPredicted RBP12.55□□□□□ -0.4
TPM1-210ENST00000558264 PDE8AO60658 829 aa12.55□□□□□ -0.4
TPM1-210ENST00000558264 EIF5P55010 431 aaKnown RBP12.55□□□□□ -0.4
TPM1-210ENST00000558264 KRT32Q14532 448 aa12.55□□□□□ -0.4
TPM1-210ENST00000558264 ANKRD1Q15327 319 aa12.55□□□□□ -0.4
TPM1-210ENST00000558264 TSGA10IPQ3SY00 556 aa12.55□□□□□ -0.4
TPM1-210ENST00000558264 FAM182BQ5T319 152 aa12.55□□□□□ -0.4
TPM1-210ENST00000558264 ZNF34Q8IZ26 560 aa12.55□□□□□ -0.4
TPM1-210ENST00000558264 SPATA31A5Q5VU36 1347 aa12.55□□□□□ -0.4
TPM1-210ENST00000558264 SPATA31A7Q8IWB4 1347 aa12.55□□□□□ -0.4
TPM1-210ENST00000558264 LTBP4Q8N2S1 1624 aa12.55□□□□□ -0.4
TPM1-210ENST00000558264 PHKA1P46020 1223 aa12.55□□□□□ -0.4
TPM1-210ENST00000558264 APOBRQ0VD83 1088 aa12.55□□□□□ -0.4
TPM1-210ENST00000558264 ISY1Q9ULR0 285 aaKnown RBP12.55□□□□□ -0.4
TPM1-210ENST00000558264 NUP98P52948 1817 aa12.54□□□□□ -0.4
TPM1-210ENST00000558264 MBD3O95983 291 aa12.54□□□□□ -0.4
TPM1-210ENST00000558264 CCT2P78371 535 aaKnown RBP12.54□□□□□ -0.4
TPM1-210ENST00000558264 GPHNQ9NQX3 736 aaPredicted RBP12.54□□□□□ -0.4
TPM1-210ENST00000558264 ERVV-1B6SEH8 477 aa12.54□□□□□ -0.4
TPM1-210ENST00000558264 E7EWF7 191 aa12.54□□□□□ -0.4
TPM1-210ENST00000558264 FOXP2O15409 715 aa12.54□□□□□ -0.4
TPM1-210ENST00000558264 IDH1O75874 414 aaKnown RBP12.54□□□□□ -0.4
TPM1-210ENST00000558264 NIP7Q9Y221 180 aaKnown RBP eCLIP12.54□□□□□ -0.4
TPM1-210ENST00000558264 RAB11FIP4Q86YS3 637 aa12.53□□□□□ -0.4
TPM1-210ENST00000558264 VGLL2Q8N8G2 317 aa12.53□□□□□ -0.4
TPM1-210ENST00000558264 DSCC1Q9BVC3 393 aa12.53□□□□□ -0.4
TPM1-210ENST00000558264 NCOA5Q9HCD5 579 aaKnown RBP12.53□□□□□ -0.4
TPM1-210ENST00000558264 WNK3Q9BYP7 1800 aa12.53□□□□□ -0.4
TPM1-210ENST00000558264 CAMTA2O94983 1202 aa12.53□□□□□ -0.4
TPM1-210ENST00000558264 PDE8BO95263 885 aa12.53□□□□□ -0.4
TPM1-210ENST00000558264 SCRN1Q12765 414 aa12.53□□□□□ -0.4
TPM1-210ENST00000558264 BICDL1Q6ZP65 573 aa12.53□□□□□ -0.4
TPM1-210ENST00000558264 CDCA7Q9BWT1 371 aaPredicted RBP12.53□□□□□ -0.4
TPM1-210ENST00000558264 PIH1D3Q9NQM4 214 aaKnown RBP12.53□□□□□ -0.4
TPM1-210ENST00000558264 CCDC102BQ68D86 513 aa12.52□□□□□ -0.41
TPM1-210ENST00000558264 GTF3C6Q969F1 213 aa12.52□□□□□ -0.41
TPM1-210ENST00000558264 THRAP3Q9Y2W1 955 aaKnown RBP12.52□□□□□ -0.41
TPM1-210ENST00000558264 NRAPQ86VF7 1730 aa12.52□□□□□ -0.41
TPM1-210ENST00000558264 SLC9C2Q5TAH2 1124 aa12.52□□□□□ -0.41
TPM1-210ENST00000558264 LRSAM1Q6UWE0 723 aa12.52□□□□□ -0.41
TPM1-210ENST00000558264 NGLY1Q96IV0 654 aa12.52□□□□□ -0.41
TPM1-210ENST00000558264 UTP14AQ9BVJ6 771 aaKnown RBP12.52□□□□□ -0.41
TPM1-210ENST00000558264 TFIP11Q9UBB9 837 aaKnown RBP12.52□□□□□ -0.41
TPM1-210ENST00000558264 FBXO3Q9UK99 471 aa12.52□□□□□ -0.41
TPM1-210ENST00000558264 GPAA1O43292 621 aa12.51□□□□□ -0.41
TPM1-210ENST00000558264 DHX32Q7L7V1 743 aaKnown RBP12.51□□□□□ -0.41
TPM1-210ENST00000558264 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.51□□□□□ -0.41
TPM1-210ENST00000558264 TAOK2Q9UL54 1235 aa12.51□□□□□ -0.41
TPM1-210ENST00000558264 DENND2AQ9ULE3 1009 aa12.51□□□□□ -0.41
TPM1-210ENST00000558264 ANKRD36CQ5JPF3 1778 aa12.51□□□□□ -0.41
TPM1-210ENST00000558264 FGAP02671 866 aa12.51□□□□□ -0.41
TPM1-210ENST00000558264 MPHOSPH8Q99549 860 aa12.51□□□□□ -0.41
TPM1-210ENST00000558264 WTIPA6NIX2 430 aaPredicted RBP12.5□□□□□ -0.41
TPM1-210ENST00000558264 FAM43AQ8N2R8 423 aa12.5□□□□□ -0.41
TPM1-210ENST00000558264 APPBP2Q92624 585 aa12.5□□□□□ -0.41
TPM1-210ENST00000558264 WWC3Q9ULE0 1092 aa12.5□□□□□ -0.41
TPM1-210ENST00000558264 IQSEC3Q9UPP2 1182 aaPredicted RBP12.5□□□□□ -0.41
TPM1-210ENST00000558264 ATP6V1DQ9Y5K8 247 aa12.5□□□□□ -0.41
TPM1-210ENST00000558264 MYH14Q7Z406 1995 aaKnown RBP12.5□□□□□ -0.41
TPM1-210ENST00000558264 UBAP1LF5GYI3 381 aa12.5□□□□□ -0.41
TPM1-210ENST00000558264 CCDC24Q8N4L8 307 aa12.5□□□□□ -0.41
TPM1-210ENST00000558264 LINC00116Q8NCU8 138 aa12.5□□□□□ -0.41
TPM1-210ENST00000558264 ALDH8A1Q9H2A2 487 aaPredicted RBP12.5□□□□□ -0.41
TPM1-210ENST00000558264 TOM1O60784 492 aa12.49□□□□□ -0.41
TPM1-210ENST00000558264 APPP05067 770 aa12.49□□□□□ -0.41
TPM1-210ENST00000558264 NKX2-3Q8TAU0 364 aa12.49□□□□□ -0.41
TPM1-210ENST00000558264 TRIM44Q96DX7 344 aaPredicted RBP12.49□□□□□ -0.41
TPM1-210ENST00000558264 MYH3P11055 1940 aa12.49□□□□□ -0.41
TPM1-210ENST00000558264 GUCY1B3Q02153 619 aa12.49□□□□□ -0.41
TPM1-210ENST00000558264 PUM3Q15397 648 aaKnown RBP12.49□□□□□ -0.41
TPM1-210ENST00000558264 C3orf67Q6ZVT6 689 aa12.49□□□□□ -0.41
TPM1-210ENST00000558264 TTC6Q86TZ1 520 aa12.49□□□□□ -0.41
TPM1-210ENST00000558264 TMEM87AQ8NBN3 555 aa12.49□□□□□ -0.41
TPM1-210ENST00000558264 LAMA4Q16363 1823 aa12.49□□□□□ -0.41
TPM1-210ENST00000558264 ZNF532Q9HCE3 1301 aa12.48□□□□□ -0.41
TPM1-210ENST00000558264 CTDNEP1O95476 244 aa12.48□□□□□ -0.41
TPM1-210ENST00000558264 NTSR2O95665 410 aa12.48□□□□□ -0.41
TPM1-210ENST00000558264 UBE2HP62256 183 aa12.48□□□□□ -0.41
TPM1-210ENST00000558264 EXOSC10Q01780 885 aaKnown RBP12.48□□□□□ -0.41
TPM1-210ENST00000558264 CEBPZQ03701 1054 aaKnown RBP12.48□□□□□ -0.41
TPM1-210ENST00000558264 FAM184AQ8NB25 1140 aa12.48□□□□□ -0.41
TPM1-210ENST00000558264 H3BQV1 296 aa12.48□□□□□ -0.41
TPM1-210ENST00000558264 ZFYP08048 801 aaPredicted RBP12.48□□□□□ -0.41
TPM1-210ENST00000558264 PDCP20941 246 aa12.48□□□□□ -0.41
TPM1-210ENST00000558264 ADD2P35612 726 aa12.48□□□□□ -0.41
TPM1-210ENST00000558264 BCAMP50895 628 aa12.48□□□□□ -0.41
TPM1-210ENST00000558264 RASGRF1Q13972 1273 aa12.48□□□□□ -0.41
TPM1-210ENST00000558264 IMMTQ16891 758 aaKnown RBP12.48□□□□□ -0.41
TPM1-210ENST00000558264 IFFO2Q5TF58 517 aa12.48□□□□□ -0.41
TPM1-210ENST00000558264 BARGINQ6ZT62 677 aa12.48□□□□□ -0.41
TPM1-210ENST00000558264 ANP32BQ92688 251 aaKnown RBP12.48□□□□□ -0.41
TPM1-210ENST00000558264 SYAP1Q96A49 352 aaPredicted RBP12.48□□□□□ -0.41
TPM1-210ENST00000558264 COL4A1P02462 1669 aa12.48□□□□□ -0.41
TPM1-210ENST00000558264 PTPDC1A2A3K4 754 aa12.47□□□□□ -0.41
TPM1-210ENST00000558264 HMGB1P09429 215 aaKnown RBP12.47□□□□□ -0.41
TPM1-210ENST00000558264 LRRFIP1Q32MZ4 808 aaKnown RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms