RNA–Protein interactions for RNA: ENST00000556541.1

FOXN3-212, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-212ENST00000556541 TTC41PQ6P2S7 1318 aa13.84□□□□□ -0.19
FOXN3-212ENST00000556541 AKAP11Q9UKA4 1901 aa13.84□□□□□ -0.19
FOXN3-212ENST00000556541 IGSF3O75054 1194 aa13.83□□□□□ -0.2
FOXN3-212ENST00000556541 POLLQ9UGP5 575 aa13.83□□□□□ -0.2
FOXN3-212ENST00000556541 BCS1LQ9Y276 419 aa13.83□□□□□ -0.2
FOXN3-212ENST00000556541 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.83□□□□□ -0.2
FOXN3-212ENST00000556541 CCDC88AQ3V6T2 1871 aa13.82□□□□□ -0.2
FOXN3-212ENST00000556541 CHD4Q14839 1912 aa13.82□□□□□ -0.2
FOXN3-212ENST00000556541 SEMA3EO15041 775 aa13.82□□□□□ -0.2
FOXN3-212ENST00000556541 TAF5LO75529 589 aa13.82□□□□□ -0.2
FOXN3-212ENST00000556541 UFL1O94874 794 aa13.82□□□□□ -0.2
FOXN3-212ENST00000556541 IFIT2P09913 472 aaKnown RBP13.82□□□□□ -0.2
FOXN3-212ENST00000556541 KCNJ4P48050 445 aa13.82□□□□□ -0.2
FOXN3-212ENST00000556541 FBXO33Q7Z6M2 555 aa13.82□□□□□ -0.2
FOXN3-212ENST00000556541 AACSQ86V21 672 aa13.82□□□□□ -0.2
FOXN3-212ENST00000556541 ZNF784Q8NCA9 323 aaPredicted RBP13.82□□□□□ -0.2
FOXN3-212ENST00000556541 HELBQ8NG08 1087 aaPredicted RBP13.82□□□□□ -0.2
FOXN3-212ENST00000556541 XAGE2Q96GT9 111 aa13.82□□□□□ -0.2
FOXN3-212ENST00000556541 IL1RAPL2Q9NP60 686 aa13.82□□□□□ -0.2
FOXN3-212ENST00000556541 DBNLQ9UJU6 430 aaKnown RBP13.82□□□□□ -0.2
FOXN3-212ENST00000556541 ZNF646O15015 1829 aaPredicted RBP13.82□□□□□ -0.2
FOXN3-212ENST00000556541 UQCRFS1P1P0C7P4 283 aa13.81□□□□□ -0.2
FOXN3-212ENST00000556541 ARID4AP29374 1257 aaPredicted RBP13.81□□□□□ -0.2
FOXN3-212ENST00000556541 KIAA2012Q0VF49 1180 aa13.81□□□□□ -0.2
FOXN3-212ENST00000556541 CAVIN4Q5BKX8 364 aa13.81□□□□□ -0.2
FOXN3-212ENST00000556541 TICAM2Q86XR7 235 aa13.81□□□□□ -0.2
FOXN3-212ENST00000556541 GPATCH3Q96I76 525 aa13.81□□□□□ -0.2
FOXN3-212ENST00000556541 TAOK3Q9H2K8 898 aa13.81□□□□□ -0.2
FOXN3-212ENST00000556541 NFKBIEO00221 500 aa13.8□□□□□ -0.2
FOXN3-212ENST00000556541 GRIN3BO60391 1043 aa13.8□□□□□ -0.2
FOXN3-212ENST00000556541 IL1R1P14778 569 aa13.8□□□□□ -0.2
FOXN3-212ENST00000556541 TIMM10P62072 90 aa13.8□□□□□ -0.2
FOXN3-212ENST00000556541 ZNF804AQ7Z570 1209 aa13.8□□□□□ -0.2
FOXN3-212ENST00000556541 FAM84BQ96KN1 310 aaPredicted RBP13.8□□□□□ -0.2
FOXN3-212ENST00000556541 LNPKQ9C0E8 428 aa13.8□□□□□ -0.2
FOXN3-212ENST00000556541 COA1Q9GZY4 146 aa13.8□□□□□ -0.2
FOXN3-212ENST00000556541 DOCK2Q92608 1830 aa13.79□□□□□ -0.2
FOXN3-212ENST00000556541 DCAF8L1A6NGE4 600 aa13.79□□□□□ -0.2
FOXN3-212ENST00000556541 C6orf229H3BNL8 230 aa13.79□□□□□ -0.2
FOXN3-212ENST00000556541 ERC2O15083 957 aa13.79□□□□□ -0.2
FOXN3-212ENST00000556541 SMARCA5O60264 1052 aaPredicted RBP13.79□□□□□ -0.2
FOXN3-212ENST00000556541 ATP5JP18859 108 aa13.79□□□□□ -0.2
FOXN3-212ENST00000556541 MX1P20591 662 aa13.79□□□□□ -0.2
FOXN3-212ENST00000556541 HIBADHP31937 336 aaKnown RBP13.79□□□□□ -0.2
FOXN3-212ENST00000556541 WASHC4Q2M389 1173 aa13.79□□□□□ -0.2
FOXN3-212ENST00000556541 CCDC158Q5M9N0 1113 aa13.79□□□□□ -0.2
FOXN3-212ENST00000556541 OLFM4Q6UX06 510 aa13.79□□□□□ -0.2
FOXN3-212ENST00000556541 PODNQ7Z5L7 613 aa13.79□□□□□ -0.2
FOXN3-212ENST00000556541 PLEKHM2Q8IWE5 1019 aa13.79□□□□□ -0.2
FOXN3-212ENST00000556541 DBNDD2Q9BQY9 259 aa13.79□□□□□ -0.2
FOXN3-212ENST00000556541 ZC3H12CQ9C0D7 883 aaKnown RBP13.79□□□□□ -0.2
FOXN3-212ENST00000556541 ECHDC1Q9NTX5 307 aa13.79□□□□□ -0.2
FOXN3-212ENST00000556541 GNL3LQ9NVN8 582 aaKnown RBP13.79□□□□□ -0.2
FOXN3-212ENST00000556541 APBB1O00213 710 aa13.78□□□□□ -0.2
FOXN3-212ENST00000556541 GLRX3O76003 335 aaKnown RBP13.78□□□□□ -0.2
FOXN3-212ENST00000556541 PDE4AP27815 886 aa13.78□□□□□ -0.2
FOXN3-212ENST00000556541 PDE1AP54750 535 aa13.78□□□□□ -0.2
FOXN3-212ENST00000556541 CCDC102BQ68D86 513 aa13.78□□□□□ -0.2
FOXN3-212ENST00000556541 TMED8Q6PL24 325 aaPredicted RBP13.78□□□□□ -0.2
FOXN3-212ENST00000556541 TDRD7Q8NHU6 1098 aaKnown RBP13.78□□□□□ -0.2
FOXN3-212ENST00000556541 NEUROD6Q96NK8 337 aa13.78□□□□□ -0.2
FOXN3-212ENST00000556541 CCDC8Q9H0W5 538 aaPredicted RBP13.78□□□□□ -0.2
FOXN3-212ENST00000556541 AK9Q5TCS8 1911 aa13.78□□□□□ -0.2
FOXN3-212ENST00000556541 MYH7P12883 1935 aa13.77□□□□□ -0.21
FOXN3-212ENST00000556541 YBX3P16989 372 aaKnown RBP eCLIP13.77□□□□□ -0.21
FOXN3-212ENST00000556541 ADORA1P30542 326 aa13.77□□□□□ -0.21
FOXN3-212ENST00000556541 IARSP41252 1262 aaKnown RBP13.77□□□□□ -0.21
FOXN3-212ENST00000556541 FKBP1AP62942 108 aaKnown RBP13.77□□□□□ -0.21
FOXN3-212ENST00000556541 SCN9AQ15858 1988 aa13.77□□□□□ -0.21
FOXN3-212ENST00000556541 FAM205AQ6ZU69 1335 aa13.77□□□□□ -0.21
FOXN3-212ENST00000556541 SLC51AQ86UW1 340 aa13.77□□□□□ -0.21
FOXN3-212ENST00000556541 CD209Q9NNX6 404 aa13.77□□□□□ -0.21
FOXN3-212ENST00000556541 TLR7Q9NYK1 1049 aaKnown RBP13.77□□□□□ -0.21
FOXN3-212ENST00000556541 DENND2AQ9ULE3 1009 aa13.77□□□□□ -0.21
FOXN3-212ENST00000556541 ZC3H4Q9UPT8 1303 aaKnown RBP13.77□□□□□ -0.21
FOXN3-212ENST00000556541 TIAM2Q8IVF5 1701 aa13.76□□□□□ -0.21
FOXN3-212ENST00000556541 SALL1Q9NSC2 1324 aa13.76□□□□□ -0.21
FOXN3-212ENST00000556541 SNAP23O00161 211 aa13.76□□□□□ -0.21
FOXN3-212ENST00000556541 LMNB1P20700 586 aa13.76□□□□□ -0.21
FOXN3-212ENST00000556541 GORABQ5T7V8 394 aa13.76□□□□□ -0.21
FOXN3-212ENST00000556541 TXNRD3Q86VQ6 643 aa13.76□□□□□ -0.21
FOXN3-212ENST00000556541 PI4K2BQ8TCG2 481 aa13.76□□□□□ -0.21
FOXN3-212ENST00000556541 MAST2Q6P0Q8 1798 aa13.76□□□□□ -0.21
FOXN3-212ENST00000556541 RFX7Q2KHR2 1363 aa13.75□□□□□ -0.21
FOXN3-212ENST00000556541 WTIPA6NIX2 430 aaPredicted RBP13.75□□□□□ -0.21
FOXN3-212ENST00000556541 PPIP5K2O43314 1243 aa13.75□□□□□ -0.21
FOXN3-212ENST00000556541 KLRK1P26718 216 aa13.75□□□□□ -0.21
FOXN3-212ENST00000556541 PHKA1P46020 1223 aa13.75□□□□□ -0.21
FOXN3-212ENST00000556541 GYG1P46976 350 aa13.75□□□□□ -0.21
FOXN3-212ENST00000556541 BCAMP50895 628 aa13.75□□□□□ -0.21
FOXN3-212ENST00000556541 C1QTNF8P60827 252 aa13.75□□□□□ -0.21
FOXN3-212ENST00000556541 TTC39AQ5SRH9 613 aa13.75□□□□□ -0.21
FOXN3-212ENST00000556541 VPS37DQ86XT2 251 aa13.75□□□□□ -0.21
FOXN3-212ENST00000556541 C16orf71Q8IYS4 520 aaPredicted RBP13.75□□□□□ -0.21
FOXN3-212ENST00000556541 HAUS7Q99871 368 aa13.75□□□□□ -0.21
FOXN3-212ENST00000556541 ZNF219Q9P2Y4 722 aaPredicted RBP13.75□□□□□ -0.21
FOXN3-212ENST00000556541 COL4A5P29400 1685 aa13.75□□□□□ -0.21
FOXN3-212ENST00000556541 MMP14P50281 582 aa13.74□□□□□ -0.21
FOXN3-212ENST00000556541 OTUD7AQ8TE49 926 aaPredicted RBP13.74□□□□□ -0.21
FOXN3-212ENST00000556541 TBC1D22AQ8WUA7 517 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms