RNA–Protein interactions for RNA: ENST00000556303.1

SNX6-207, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-207ENST00000556303 LMBR1LQ6UX01 489 aa15.93■□□□□ 0.14
SNX6-207ENST00000556303 DCPSQ96C86 337 aaKnown RBP15.93■□□□□ 0.14
SNX6-207ENST00000556303 GLIS2Q9BZE0 524 aaPredicted RBP15.93■□□□□ 0.14
SNX6-207ENST00000556303 PSME4Q14997 1843 aa15.93■□□□□ 0.14
SNX6-207ENST00000556303 USP17L8P0C7I0 530 aa15.92■□□□□ 0.14
SNX6-207ENST00000556303 KCNJ4P48050 445 aa15.92■□□□□ 0.14
SNX6-207ENST00000556303 MAP2K1Q02750 393 aaPredicted RBP15.92■□□□□ 0.14
SNX6-207ENST00000556303 SAPCD2Q86UD0 394 aa15.92■□□□□ 0.14
SNX6-207ENST00000556303 SSH1Q8WYL5 1049 aa15.92■□□□□ 0.14
SNX6-207ENST00000556303 CHMP3Q9Y3E7 222 aa15.92■□□□□ 0.14
SNX6-207ENST00000556303 BRPF1P55201 1214 aaPredicted RBP15.91■□□□□ 0.14
SNX6-207ENST00000556303 TAF7LQ5H9L4 462 aa15.91■□□□□ 0.14
SNX6-207ENST00000556303 LDHAL6AQ6ZMR3 332 aa15.91■□□□□ 0.14
SNX6-207ENST00000556303 KRT26Q7Z3Y9 468 aa15.91■□□□□ 0.14
SNX6-207ENST00000556303 AIDAQ96BJ3 306 aa15.91■□□□□ 0.14
SNX6-207ENST00000556303 WBP1LQ9NX94 342 aa15.91■□□□□ 0.14
SNX6-207ENST00000556303 WTIPA6NIX2 430 aaPredicted RBP15.9■□□□□ 0.14
SNX6-207ENST00000556303 EGFRP00533 1210 aa15.9■□□□□ 0.14
SNX6-207ENST00000556303 MAP2K2P36507 400 aa15.9■□□□□ 0.14
SNX6-207ENST00000556303 FMR1Q06787 632 aaKnown RBP eCLIP15.9■□□□□ 0.14
SNX6-207ENST00000556303 EPHA10Q5JZY3 1008 aa15.9■□□□□ 0.14
SNX6-207ENST00000556303 DACT2Q5SW24 774 aa15.9■□□□□ 0.14
SNX6-207ENST00000556303 RBM26Q5T8P6 1007 aaKnown RBP15.9■□□□□ 0.14
SNX6-207ENST00000556303 TTLL5Q6EMB2 1281 aa15.9■□□□□ 0.14
SNX6-207ENST00000556303 USP48Q86UV5 1035 aa15.9■□□□□ 0.14
SNX6-207ENST00000556303 OGFOD1Q8N543 542 aa15.9■□□□□ 0.14
SNX6-207ENST00000556303 CAPNS2Q96L46 248 aa15.9■□□□□ 0.14
SNX6-207ENST00000556303 MYOZ2Q9NPC6 264 aa15.9■□□□□ 0.14
SNX6-207ENST00000556303 PITPNM2Q9BZ72 1349 aa15.9■□□□□ 0.14
SNX6-207ENST00000556303 POLR2AP24928 1970 aaKnown RBP15.89■□□□□ 0.13
SNX6-207ENST00000556303 RABL6Q3YEC7 729 aaPredicted RBP15.89■□□□□ 0.13
SNX6-207ENST00000556303 TXNRD3Q86VQ6 643 aa15.89■□□□□ 0.13
SNX6-207ENST00000556303 SULF1Q8IWU6 871 aa15.89■□□□□ 0.13
SNX6-207ENST00000556303 CDCA7LQ96GN5 454 aa15.89■□□□□ 0.13
SNX6-207ENST00000556303 CD209Q9NNX6 404 aa15.89■□□□□ 0.13
SNX6-207ENST00000556303 SPEF2Q9C093 1822 aa15.89■□□□□ 0.13
SNX6-207ENST00000556303 NBPF7P0C2Y1 421 aaPredicted RBP15.88■□□□□ 0.13
SNX6-207ENST00000556303 CTCFP49711 727 aaPredicted RBP15.88■□□□□ 0.13
SNX6-207ENST00000556303 SCARF1Q14162 830 aa15.88■□□□□ 0.13
SNX6-207ENST00000556303 COL13A1Q5TAT6 717 aaPredicted RBP15.88■□□□□ 0.13
SNX6-207ENST00000556303 KAZALD1Q96I82 304 aa15.88■□□□□ 0.13
SNX6-207ENST00000556303 SUCLG2Q96I99 432 aa15.88■□□□□ 0.13
SNX6-207ENST00000556303 PRDM10Q9NQV6 1147 aa15.88■□□□□ 0.13
SNX6-207ENST00000556303 CNNM1Q9NRU3 951 aa15.88■□□□□ 0.13
SNX6-207ENST00000556303 IRS2Q9Y4H2 1338 aa15.88■□□□□ 0.13
SNX6-207ENST00000556303 IL1R1P14778 569 aa15.87■□□□□ 0.13
SNX6-207ENST00000556303 FKBP1AP62942 108 aaKnown RBP15.87■□□□□ 0.13
SNX6-207ENST00000556303 UBE4AQ14139 1066 aa15.87■□□□□ 0.13
SNX6-207ENST00000556303 ZNF804AQ7Z570 1209 aa15.87■□□□□ 0.13
SNX6-207ENST00000556303 C2orf69Q8N8R5 385 aa15.87■□□□□ 0.13
SNX6-207ENST00000556303 GGA3Q9NZ52 723 aa15.87■□□□□ 0.13
SNX6-207ENST00000556303 HDAC9Q9UKV0 1011 aa15.87■□□□□ 0.13
SNX6-207ENST00000556303 TAF5LO75529 589 aa15.86■□□□□ 0.13
SNX6-207ENST00000556303 CYP4F22Q6NT55 531 aa15.86■□□□□ 0.13
SNX6-207ENST00000556303 PAXIP1Q6ZW49 1069 aaPredicted RBP15.86■□□□□ 0.13
SNX6-207ENST00000556303 ZNF408Q9H9D4 720 aa15.86■□□□□ 0.13
SNX6-207ENST00000556303 SMC4Q9NTJ3 1288 aa15.86■□□□□ 0.13
SNX6-207ENST00000556303 HDAC5Q9UQL6 1122 aa15.86■□□□□ 0.13
SNX6-207ENST00000556303 MROH5Q6ZUA9 1318 aa15.86■□□□□ 0.13
SNX6-207ENST00000556303 FOXN1O15353 648 aa15.85■□□□□ 0.13
SNX6-207ENST00000556303 KLRK1P26718 216 aa15.85■□□□□ 0.13
SNX6-207ENST00000556303 FKBP1BP68106 108 aa15.85■□□□□ 0.13
SNX6-207ENST00000556303 ANGEL2Q5VTE6 544 aaKnown RBP15.85■□□□□ 0.13
SNX6-207ENST00000556303 ZNF594Q96JF6 807 aaPredicted RBP15.85■□□□□ 0.13
SNX6-207ENST00000556303 BEGAINQ9BUH8 593 aa15.85■□□□□ 0.13
SNX6-207ENST00000556303 USP44Q9H0E7 712 aa15.85■□□□□ 0.13
SNX6-207ENST00000556303 BICC1Q9H694 974 aaKnown RBP15.85■□□□□ 0.13
SNX6-207ENST00000556303 GBA2Q9HCG7 927 aaPredicted RBP15.85■□□□□ 0.13
SNX6-207ENST00000556303 RIPOR2Q9Y4F9 1068 aa15.85■□□□□ 0.13
SNX6-207ENST00000556303 CA12O43570 354 aa15.84■□□□□ 0.13
SNX6-207ENST00000556303 HUNKP57058 714 aa15.84■□□□□ 0.13
SNX6-207ENST00000556303 GTF2IP78347 998 aa15.84■□□□□ 0.13
SNX6-207ENST00000556303 HELBQ8NG08 1087 aaPredicted RBP15.84■□□□□ 0.13
SNX6-207ENST00000556303 ARHGAP45Q92619 1136 aa15.84■□□□□ 0.13
SNX6-207ENST00000556303 FBXW7Q969H0 707 aa15.84■□□□□ 0.13
SNX6-207ENST00000556303 API5Q9BZZ5 524 aaKnown RBP15.84■□□□□ 0.13
SNX6-207ENST00000556303 ADM5C9JUS6 153 aa15.83■□□□□ 0.12
SNX6-207ENST00000556303 WNT10BO00744 389 aa15.83■□□□□ 0.12
SNX6-207ENST00000556303 SASH1O94885 1247 aa15.83■□□□□ 0.12
SNX6-207ENST00000556303 NOGQ13253 232 aa15.83■□□□□ 0.12
SNX6-207ENST00000556303 ANKRD44Q8N8A2 993 aa15.83■□□□□ 0.12
SNX6-207ENST00000556303 MTMR14Q8NCE2 650 aa15.83■□□□□ 0.12
SNX6-207ENST00000556303 CCDC102AQ96A19 550 aa15.83■□□□□ 0.12
SNX6-207ENST00000556303 THSD7BQ9C0I4 1608 aa15.83■□□□□ 0.12
SNX6-207ENST00000556303 SNAP23O00161 211 aa15.82■□□□□ 0.12
SNX6-207ENST00000556303 RGMBQ6NW40 437 aa15.82■□□□□ 0.12
SNX6-207ENST00000556303 TNS4Q8IZW8 715 aa15.82■□□□□ 0.12
SNX6-207ENST00000556303 CDCA5Q96FF9 252 aa15.82■□□□□ 0.12
SNX6-207ENST00000556303 PLIN1O60240 522 aa15.81■□□□□ 0.12
SNX6-207ENST00000556303 ASTN2O75129 1339 aaPredicted RBP15.81■□□□□ 0.12
SNX6-207ENST00000556303 HIBADHP31937 336 aaKnown RBP15.81■□□□□ 0.12
SNX6-207ENST00000556303 RARSP54136 660 aaKnown RBP15.81■□□□□ 0.12
SNX6-207ENST00000556303 NBPF9Q3BBW0 867 aa15.81■□□□□ 0.12
SNX6-207ENST00000556303 FAM205AQ6ZU69 1335 aa15.81■□□□□ 0.12
SNX6-207ENST00000556303 ZBED3Q96IU2 234 aaPredicted RBP15.81■□□□□ 0.12
SNX6-207ENST00000556303 KIF16BQ96L93 1317 aa15.81■□□□□ 0.12
SNX6-207ENST00000556303 MXD3Q9BW11 206 aa15.81■□□□□ 0.12
SNX6-207ENST00000556303 FBXO3Q9UK99 471 aa15.81■□□□□ 0.12
SNX6-207ENST00000556303 NOB1Q9ULX3 412 aaKnown RBP15.81■□□□□ 0.12
SNX6-207ENST00000556303 ZNF646O15015 1829 aaPredicted RBP15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms