RNA–Protein interactions for RNA: ENST00000554945.1

SRP54-AS1-201, Transcript of SRP54 antisense RNA 1 (head to head), humanhuman

TSL 3

Gene SRP54-AS1, Length 600 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-AS1-201ENST00000554945 ATP2B4P23634 1241 aa12.11□□□□□ -0.47
SRP54-AS1-201ENST00000554945 ZNF157P51786 506 aaPredicted RBP12.11□□□□□ -0.47
SRP54-AS1-201ENST00000554945 ZNF280AP59817 542 aaPredicted RBP12.11□□□□□ -0.47
SRP54-AS1-201ENST00000554945 MLLT1Q03111 559 aaPredicted RBP12.11□□□□□ -0.47
SRP54-AS1-201ENST00000554945 RSBN1LQ6PCB5 846 aaPredicted RBP12.11□□□□□ -0.47
SRP54-AS1-201ENST00000554945 ANKRD18AQ8IVF6 992 aa12.11□□□□□ -0.47
SRP54-AS1-201ENST00000554945 C8orf58Q8NAV2 365 aa12.11□□□□□ -0.47
SRP54-AS1-201ENST00000554945 ZIC5Q96T25 663 aa12.11□□□□□ -0.47
SRP54-AS1-201ENST00000554945 MCOLN1Q9GZU1 580 aa12.11□□□□□ -0.47
SRP54-AS1-201ENST00000554945 MYH3P11055 1940 aa12.11□□□□□ -0.47
SRP54-AS1-201ENST00000554945 GALR2O43603 387 aaPredicted RBP12.1□□□□□ -0.47
SRP54-AS1-201ENST00000554945 DGKZQ13574 1117 aa12.1□□□□□ -0.47
SRP54-AS1-201ENST00000554945 PODNQ7Z5L7 613 aa12.1□□□□□ -0.47
SRP54-AS1-201ENST00000554945 CDC5LQ99459 802 aaKnown RBP12.1□□□□□ -0.47
SRP54-AS1-201ENST00000554945 SAGE1Q9NXZ1 904 aa12.1□□□□□ -0.47
SRP54-AS1-201ENST00000554945 GGA3Q9NZ52 723 aa12.1□□□□□ -0.47
SRP54-AS1-201ENST00000554945 MAP3K2Q9Y2U5 619 aa12.1□□□□□ -0.47
SRP54-AS1-201ENST00000554945 USP17L3A6NCW0 530 aa12.09□□□□□ -0.47
SRP54-AS1-201ENST00000554945 USP17L4A6NCW7 530 aa12.09□□□□□ -0.47
SRP54-AS1-201ENST00000554945 KIF23Q02241 960 aaPredicted RBP12.09□□□□□ -0.47
SRP54-AS1-201ENST00000554945 SCARF1Q14162 830 aa12.09□□□□□ -0.47
SRP54-AS1-201ENST00000554945 KSR2Q6VAB6 950 aa12.09□□□□□ -0.47
SRP54-AS1-201ENST00000554945 USP17L1Q7RTZ2 530 aa12.09□□□□□ -0.47
SRP54-AS1-201ENST00000554945 JARID2Q92833 1246 aaPredicted RBP12.09□□□□□ -0.47
SRP54-AS1-201ENST00000554945 CDCA5Q96FF9 252 aa12.09□□□□□ -0.47
SRP54-AS1-201ENST00000554945 OTUD5Q96G74 571 aa12.09□□□□□ -0.47
SRP54-AS1-201ENST00000554945 CCDC85AQ96PX6 553 aaPredicted RBP12.09□□□□□ -0.47
SRP54-AS1-201ENST00000554945 GMLQ99445 158 aa12.09□□□□□ -0.47
SRP54-AS1-201ENST00000554945 PI4KAP2A4QPH2 592 aa12.08□□□□□ -0.48
SRP54-AS1-201ENST00000554945 SLC10A3P09131 477 aa12.08□□□□□ -0.48
SRP54-AS1-201ENST00000554945 USP17L8P0C7I0 530 aa12.08□□□□□ -0.48
SRP54-AS1-201ENST00000554945 CTSWP56202 376 aa12.08□□□□□ -0.48
SRP54-AS1-201ENST00000554945 FKBP1BP68106 108 aa12.08□□□□□ -0.48
SRP54-AS1-201ENST00000554945 NEXNQ0ZGT2 675 aa12.08□□□□□ -0.48
SRP54-AS1-201ENST00000554945 ANGEL2Q5VTE6 544 aaKnown RBP12.08□□□□□ -0.48
SRP54-AS1-201ENST00000554945 PI4KAP1Q8N8J0 262 aa12.08□□□□□ -0.48
SRP54-AS1-201ENST00000554945 MYOZ2Q9NPC6 264 aa12.08□□□□□ -0.48
SRP54-AS1-201ENST00000554945 BSDC1Q9NW68 430 aaPredicted RBP12.08□□□□□ -0.48
SRP54-AS1-201ENST00000554945 RNF186Q9NXI6 227 aa12.08□□□□□ -0.48
SRP54-AS1-201ENST00000554945 SPEF2Q9C093 1822 aa12.08□□□□□ -0.48
SRP54-AS1-201ENST00000554945 ASTN2O75129 1339 aaPredicted RBP12.08□□□□□ -0.48
SRP54-AS1-201ENST00000554945 PITPNM2Q9BZ72 1349 aa12.08□□□□□ -0.48
SRP54-AS1-201ENST00000554945 IGKV5-2P06315 115 aa12.07□□□□□ -0.48
SRP54-AS1-201ENST00000554945 TSPYL6Q8N831 410 aa12.07□□□□□ -0.48
SRP54-AS1-201ENST00000554945 TTLL11Q8NHH1 800 aa12.07□□□□□ -0.48
SRP54-AS1-201ENST00000554945 CSRNP1Q96S65 589 aa12.07□□□□□ -0.48
SRP54-AS1-201ENST00000554945 STK31Q9BXU1 1019 aa12.07□□□□□ -0.48
SRP54-AS1-201ENST00000554945 MINPP1Q9UNW1 487 aa12.07□□□□□ -0.48
SRP54-AS1-201ENST00000554945 MED23Q9ULK4 1368 aa12.06□□□□□ -0.48
SRP54-AS1-201ENST00000554945 PAPPA2Q9BXP8 1791 aa12.06□□□□□ -0.48
SRP54-AS1-201ENST00000554945 TRPA1O75762 1119 aa12.06□□□□□ -0.48
SRP54-AS1-201ENST00000554945 MMP14P50281 582 aa12.06□□□□□ -0.48
SRP54-AS1-201ENST00000554945 CCT4P50991 539 aaKnown RBP12.05□□□□□ -0.48
SRP54-AS1-201ENST00000554945 OGFOD1Q8N543 542 aa12.05□□□□□ -0.48
SRP54-AS1-201ENST00000554945 COA1Q9GZY4 146 aa12.05□□□□□ -0.48
SRP54-AS1-201ENST00000554945 GREM2Q9H772 168 aa12.05□□□□□ -0.48
SRP54-AS1-201ENST00000554945 LEMD3Q9Y2U8 911 aa12.05□□□□□ -0.48
SRP54-AS1-201ENST00000554945 MYO3BQ8WXR4 1341 aa12.05□□□□□ -0.48
SRP54-AS1-201ENST00000554945 CACNA1FO60840 1977 aa12.05□□□□□ -0.48
SRP54-AS1-201ENST00000554945 ZNF646O15015 1829 aaPredicted RBP12.04□□□□□ -0.48
SRP54-AS1-201ENST00000554945 WTIPA6NIX2 430 aaPredicted RBP12.04□□□□□ -0.48
SRP54-AS1-201ENST00000554945 NEURL1BA8MQ27 555 aa12.04□□□□□ -0.48
SRP54-AS1-201ENST00000554945 POTEB2H3BUK9 544 aa12.04□□□□□ -0.48
SRP54-AS1-201ENST00000554945 H7C1W4 665 aa12.04□□□□□ -0.48
SRP54-AS1-201ENST00000554945 IGHMBP2P38935 993 aaKnown RBP12.04□□□□□ -0.48
SRP54-AS1-201ENST00000554945 CCDC27Q2M243 656 aa12.04□□□□□ -0.48
SRP54-AS1-201ENST00000554945 CWF19L2Q2TBE0 894 aaKnown RBP12.04□□□□□ -0.48
SRP54-AS1-201ENST00000554945 DACT2Q5SW24 774 aa12.04□□□□□ -0.48
SRP54-AS1-201ENST00000554945 STRIP1Q5VSL9 837 aa12.04□□□□□ -0.48
SRP54-AS1-201ENST00000554945 RASAL3Q86YV0 1011 aa12.04□□□□□ -0.48
SRP54-AS1-201ENST00000554945 TSR2Q969E8 191 aaKnown RBP12.04□□□□□ -0.48
SRP54-AS1-201ENST00000554945 TWISTNBQ3B726 338 aaPredicted RBP12.03□□□□□ -0.48
SRP54-AS1-201ENST00000554945 NBPF9Q3BBW0 867 aa12.03□□□□□ -0.48
SRP54-AS1-201ENST00000554945 WNT10BO00744 389 aa12.02□□□□□ -0.49
SRP54-AS1-201ENST00000554945 NF2P35240 595 aa12.02□□□□□ -0.49
SRP54-AS1-201ENST00000554945 G2E3Q7L622 706 aa12.02□□□□□ -0.49
SRP54-AS1-201ENST00000554945 UBE3BQ7Z3V4 1068 aa12.02□□□□□ -0.49
SRP54-AS1-201ENST00000554945 WWC1Q8IX03 1113 aa12.02□□□□□ -0.49
SRP54-AS1-201ENST00000554945 FBXW7Q969H0 707 aa12.02□□□□□ -0.49
SRP54-AS1-201ENST00000554945 MPHOSPH8Q99549 860 aa12.02□□□□□ -0.49
SRP54-AS1-201ENST00000554945 PLA2G12BQ9BX93 195 aa12.02□□□□□ -0.49
SRP54-AS1-201ENST00000554945 ANKRD2Q9GZV1 360 aa12.02□□□□□ -0.49
SRP54-AS1-201ENST00000554945 TNRC18O15417 2968 aaPredicted RBP12.02□□□□□ -0.49
SRP54-AS1-201ENST00000554945 UBE2Q2LH0YL09 131 aa12.01□□□□□ -0.49
SRP54-AS1-201ENST00000554945 CSF1RP07333 972 aa12.01□□□□□ -0.49
SRP54-AS1-201ENST00000554945 ITGA6P23229 1130 aa12.01□□□□□ -0.49
SRP54-AS1-201ENST00000554945 GCKRQ14397 625 aa12.01□□□□□ -0.49
SRP54-AS1-201ENST00000554945 TTLL5Q6EMB2 1281 aa12.01□□□□□ -0.49
SRP54-AS1-201ENST00000554945 CTU1Q7Z7A3 348 aaKnown RBP12.01□□□□□ -0.49
SRP54-AS1-201ENST00000554945 TXNRD3Q86VQ6 643 aa12.01□□□□□ -0.49
SRP54-AS1-201ENST00000554945 MXD3Q9BW11 206 aa12.01□□□□□ -0.49
SRP54-AS1-201ENST00000554945 MYH16Q9H6N6 1097 aa12.01□□□□□ -0.49
SRP54-AS1-201ENST00000554945 SCAF8Q9UPN6 1271 aaKnown RBP12.01□□□□□ -0.49
SRP54-AS1-201ENST00000554945 ZNF804BA4D1E1 1349 aa12.01□□□□□ -0.49
SRP54-AS1-201ENST00000554945 IL16Q14005 1332 aa12.01□□□□□ -0.49
SRP54-AS1-201ENST00000554945 SLC34A2O95436 690 aa12□□□□□ -0.49
SRP54-AS1-201ENST00000554945 TM4SF4P48230 202 aa12□□□□□ -0.49
SRP54-AS1-201ENST00000554945 FLIIQ13045 1269 aa12□□□□□ -0.49
SRP54-AS1-201ENST00000554945 TTLL12Q14166 644 aaPredicted RBP12□□□□□ -0.49
SRP54-AS1-201ENST00000554945 PRAMEF18Q5VWM3 479 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms