RNA–Protein interactions for RNA: ENST00000554117.1

PNN-203, Transcript of pinin, desmosome associated protein, humanhuman

TSL 2

Gene PNN, Length 624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNN-203ENST00000554117 G2E3Q7L622 706 aa13.63□□□□□ -0.23
PNN-203ENST00000554117 USP48Q86UV5 1035 aa13.63□□□□□ -0.23
PNN-203ENST00000554117 C9orf78Q9NZ63 289 aaPredicted RBP13.63□□□□□ -0.23
PNN-203ENST00000554117 HDAC9Q9UKV0 1011 aa13.63□□□□□ -0.23
PNN-203ENST00000554117 ZNF609O15014 1411 aa13.63□□□□□ -0.23
PNN-203ENST00000554117 H7C1W4 665 aa13.62□□□□□ -0.23
PNN-203ENST00000554117 VAMP4O75379 141 aa13.62□□□□□ -0.23
PNN-203ENST00000554117 USP17L8P0C7I0 530 aa13.62□□□□□ -0.23
PNN-203ENST00000554117 NF2P35240 595 aa13.62□□□□□ -0.23
PNN-203ENST00000554117 LBX1P52954 281 aa13.62□□□□□ -0.23
PNN-203ENST00000554117 HUNKP57058 714 aa13.62□□□□□ -0.23
PNN-203ENST00000554117 IFIT5Q13325 482 aaKnown RBP13.62□□□□□ -0.23
PNN-203ENST00000554117 CCDC57Q2TAC2 916 aa13.62□□□□□ -0.23
PNN-203ENST00000554117 CST9Q5W186 159 aa13.62□□□□□ -0.23
PNN-203ENST00000554117 SAPCD2Q86UD0 394 aa13.62□□□□□ -0.23
PNN-203ENST00000554117 PLA2G12BQ9BX93 195 aa13.62□□□□□ -0.23
PNN-203ENST00000554117 COA1Q9GZY4 146 aa13.62□□□□□ -0.23
PNN-203ENST00000554117 MINPP1Q9UNW1 487 aa13.62□□□□□ -0.23
PNN-203ENST00000554117 HIRAP54198 1017 aaPredicted RBP13.61□□□□□ -0.23
PNN-203ENST00000554117 NOGQ13253 232 aa13.61□□□□□ -0.23
PNN-203ENST00000554117 GBA2Q9HCG7 927 aaPredicted RBP13.61□□□□□ -0.23
PNN-203ENST00000554117 ZNF804BA4D1E1 1349 aa13.61□□□□□ -0.23
PNN-203ENST00000554117 FMR1Q06787 632 aaKnown RBP eCLIP13.6□□□□□ -0.23
PNN-203ENST00000554117 SLC4A10Q6U841 1118 aa13.6□□□□□ -0.23
PNN-203ENST00000554117 CCDC102AQ96A19 550 aa13.6□□□□□ -0.23
PNN-203ENST00000554117 MYOZ2Q9NPC6 264 aa13.6□□□□□ -0.23
PNN-203ENST00000554117 GGA3Q9NZ52 723 aa13.6□□□□□ -0.23
PNN-203ENST00000554117 PITPNM2Q9BZ72 1349 aa13.6□□□□□ -0.23
PNN-203ENST00000554117 BRPF1P55201 1214 aaPredicted RBP13.59□□□□□ -0.23
PNN-203ENST00000554117 FAM161AQ3B820 660 aa13.59□□□□□ -0.23
PNN-203ENST00000554117 STRIP1Q5VSL9 837 aa13.59□□□□□ -0.23
PNN-203ENST00000554117 ZNF804AQ7Z570 1209 aa13.59□□□□□ -0.23
PNN-203ENST00000554117 SRCIN1Q9C0H9 1055 aa13.59□□□□□ -0.23
PNN-203ENST00000554117 KCNQ5Q9NR82 932 aa13.59□□□□□ -0.23
PNN-203ENST00000554117 CNNM1Q9NRU3 951 aa13.59□□□□□ -0.23
PNN-203ENST00000554117 SHTN1A0MZ66 631 aa13.58□□□□□ -0.24
PNN-203ENST00000554117 GRM8O00222 908 aa13.58□□□□□ -0.24
PNN-203ENST00000554117 ALDH1L1O75891 902 aa13.58□□□□□ -0.24
PNN-203ENST00000554117 ZNF157P51786 506 aaPredicted RBP13.58□□□□□ -0.24
PNN-203ENST00000554117 SCARF1Q14162 830 aa13.58□□□□□ -0.24
PNN-203ENST00000554117 ANGEL2Q5VTE6 544 aaKnown RBP13.58□□□□□ -0.24
PNN-203ENST00000554117 TTLL5Q6EMB2 1281 aa13.58□□□□□ -0.24
PNN-203ENST00000554117 RGMBQ6NW40 437 aa13.58□□□□□ -0.24
PNN-203ENST00000554117 REM2Q8IYK8 340 aaPredicted RBP13.58□□□□□ -0.24
PNN-203ENST00000554117 ADM5C9JUS6 153 aa13.57□□□□□ -0.24
PNN-203ENST00000554117 MYO1BO43795 1136 aa13.57□□□□□ -0.24
PNN-203ENST00000554117 AOC2O75106 756 aa13.57□□□□□ -0.24
PNN-203ENST00000554117 CSF1RP07333 972 aa13.57□□□□□ -0.24
PNN-203ENST00000554117 HSPA8P11142 646 aaKnown RBP13.57□□□□□ -0.24
PNN-203ENST00000554117 ZNF280AP59817 542 aaPredicted RBP13.57□□□□□ -0.24
PNN-203ENST00000554117 FKBP1BP68106 108 aa13.57□□□□□ -0.24
PNN-203ENST00000554117 CHRNDQ07001 517 aa13.57□□□□□ -0.24
PNN-203ENST00000554117 TTLL12Q14166 644 aaPredicted RBP13.57□□□□□ -0.24
PNN-203ENST00000554117 LAMB1P07942 1786 aa13.57□□□□□ -0.24
PNN-203ENST00000554117 F6X3S4 739 aa13.56□□□□□ -0.24
PNN-203ENST00000554117 LDHAL6AQ6ZMR3 332 aa13.56□□□□□ -0.24
PNN-203ENST00000554117 APOBEC3FQ8IUX4 373 aaKnown RBP13.56□□□□□ -0.24
PNN-203ENST00000554117 CDCA5Q96FF9 252 aa13.56□□□□□ -0.24
PNN-203ENST00000554117 E9PSI1 815 aa13.55□□□□□ -0.24
PNN-203ENST00000554117 BEND3Q5T5X7 828 aa13.55□□□□□ -0.24
PNN-203ENST00000554117 PTPRCP08575 1304 aa13.55□□□□□ -0.24
PNN-203ENST00000554117 COL1A1P02452 1464 aaPredicted RBP13.55□□□□□ -0.24
PNN-203ENST00000554117 PLIN1O60240 522 aa13.54□□□□□ -0.24
PNN-203ENST00000554117 EGFRP00533 1210 aa13.54□□□□□ -0.24
PNN-203ENST00000554117 GTF2IP78347 998 aa13.54□□□□□ -0.24
PNN-203ENST00000554117 DACT2Q5SW24 774 aa13.54□□□□□ -0.24
PNN-203ENST00000554117 LMBR1LQ6UX01 489 aa13.54□□□□□ -0.24
PNN-203ENST00000554117 CASP7P55210 303 aa13.53□□□□□ -0.24
PNN-203ENST00000554117 DLGAP5Q15398 846 aa13.53□□□□□ -0.24
PNN-203ENST00000554117 VPS37DQ86XT2 251 aa13.53□□□□□ -0.24
PNN-203ENST00000554117 KIAA0825Q8IV33 1275 aa13.53□□□□□ -0.24
PNN-203ENST00000554117 CD209Q9NNX6 404 aa13.53□□□□□ -0.24
PNN-203ENST00000554117 FRAT2O75474 233 aaPredicted RBP13.52□□□□□ -0.25
PNN-203ENST00000554117 TAF5LO75529 589 aa13.52□□□□□ -0.25
PNN-203ENST00000554117 RBM5P52756 815 aaKnown RBP eCLIP13.52□□□□□ -0.25
PNN-203ENST00000554117 FOXO4P98177 505 aa13.52□□□□□ -0.25
PNN-203ENST00000554117 ARMC9Q7Z3E5 817 aa13.52□□□□□ -0.25
PNN-203ENST00000554117 GMLQ99445 158 aa13.52□□□□□ -0.25
PNN-203ENST00000554117 SAGE1Q9NXZ1 904 aa13.52□□□□□ -0.25
PNN-203ENST00000554117 HDAC5Q9UQL6 1122 aa13.52□□□□□ -0.25
PNN-203ENST00000554117 MYH2Q9UKX2 1941 aa13.52□□□□□ -0.25
PNN-203ENST00000554117 OTOFQ9HC10 1997 aa13.51□□□□□ -0.25
PNN-203ENST00000554117 MROH5Q6ZUA9 1318 aa13.51□□□□□ -0.25
PNN-203ENST00000554117 WNT10BO00744 389 aa13.51□□□□□ -0.25
PNN-203ENST00000554117 SLC10A3P09131 477 aa13.5□□□□□ -0.25
PNN-203ENST00000554117 FKBP1AP62942 108 aaKnown RBP13.5□□□□□ -0.25
PNN-203ENST00000554117 UBE4AQ14139 1066 aa13.5□□□□□ -0.25
PNN-203ENST00000554117 NBPF9Q3BBW0 867 aa13.5□□□□□ -0.25
PNN-203ENST00000554117 CAVIN4Q5BKX8 364 aa13.5□□□□□ -0.25
PNN-203ENST00000554117 C15orf52Q6ZUT6 534 aaKnown RBP13.5□□□□□ -0.25
PNN-203ENST00000554117 HELBQ8NG08 1087 aaPredicted RBP13.5□□□□□ -0.25
PNN-203ENST00000554117 SPINK5Q9NQ38 1064 aaPredicted RBP13.5□□□□□ -0.25
PNN-203ENST00000554117 TSKSQ9UJT2 592 aa13.5□□□□□ -0.25
PNN-203ENST00000554117 SASH1O94885 1247 aa13.49□□□□□ -0.25
PNN-203ENST00000554117 KIF23Q02241 960 aaPredicted RBP13.49□□□□□ -0.25
PNN-203ENST00000554117 TNFAIP1Q13829 316 aa13.49□□□□□ -0.25
PNN-203ENST00000554117 ALDH1L2Q3SY69 923 aa13.49□□□□□ -0.25
PNN-203ENST00000554117 TXNRD3Q86VQ6 643 aa13.49□□□□□ -0.25
PNN-203ENST00000554117 ABHD8Q96I13 439 aa13.49□□□□□ -0.25
PNN-203ENST00000554117 PPP2R3BQ9Y5P8 575 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms