RNA–Protein interactions for RNA: ENST00000553999.5

HIF1A-206, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 4

Gene HIF1A, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-206ENST00000553999 PAXIP1Q6ZW49 1069 aaPredicted RBP26.01■■□□□ 1.75
HIF1A-206ENST00000553999 USP17L1Q7RTZ2 530 aa26.01■■□□□ 1.75
HIF1A-206ENST00000553999 DPF2Q92785 391 aa26.01■■□□□ 1.75
HIF1A-206ENST00000553999 PUS3Q9BZE2 481 aaKnown RBP26.01■■□□□ 1.75
HIF1A-206ENST00000553999 RPS12P25398 132 aaKnown RBP26■■□□□ 1.75
HIF1A-206ENST00000553999 KIF4BQ2VIQ3 1234 aa26■■□□□ 1.75
HIF1A-206ENST00000553999 USP48Q86UV5 1035 aa25.99■■□□□ 1.75
HIF1A-206ENST00000553999 ANKRD44Q8N8A2 993 aa25.99■■□□□ 1.75
HIF1A-206ENST00000553999 JMYQ8N9B5 988 aa25.99■■□□□ 1.75
HIF1A-206ENST00000553999 CNTNAP1P78357 1384 aa25.98■■□□□ 1.75
HIF1A-206ENST00000553999 A0A1B0GUL6 1792 aa25.98■■□□□ 1.75
HIF1A-206ENST00000553999 RARSP54136 660 aaKnown RBP25.98■■□□□ 1.75
HIF1A-206ENST00000553999 PODNQ7Z5L7 613 aa25.98■■□□□ 1.75
HIF1A-206ENST00000553999 JAG2Q9Y219 1238 aa25.98■■□□□ 1.75
HIF1A-206ENST00000553999 UTYO14607 1347 aa25.97■■□□□ 1.75
HIF1A-206ENST00000553999 ADM5C9JUS6 153 aa25.97■■□□□ 1.75
HIF1A-206ENST00000553999 CELF2O95319 508 aaKnown RBP25.97■■□□□ 1.75
HIF1A-206ENST00000553999 KLHDC4Q8TBB5 520 aa25.97■■□□□ 1.75
HIF1A-206ENST00000553999 COA1Q9GZY4 146 aa25.97■■□□□ 1.75
HIF1A-206ENST00000553999 USP44Q9H0E7 712 aa25.97■■□□□ 1.75
HIF1A-206ENST00000553999 GGA3Q9NZ52 723 aa25.96■■□□□ 1.75
HIF1A-206ENST00000553999 SCAF8Q9UPN6 1271 aaKnown RBP25.96■■□□□ 1.75
HIF1A-206ENST00000553999 CT47B1P0C2W7 299 aaPredicted RBP25.95■■□□□ 1.74
HIF1A-206ENST00000553999 VEGFBP49765 207 aa25.95■■□□□ 1.74
HIF1A-206ENST00000553999 GTF2IP78347 998 aa25.95■■□□□ 1.74
HIF1A-206ENST00000553999 CST9Q5W186 159 aa25.95■■□□□ 1.74
HIF1A-206ENST00000553999 AGBL3Q8NEM8 1001 aa25.95■■□□□ 1.74
HIF1A-206ENST00000553999 TNNQ9UQP3 1299 aa25.95■■□□□ 1.74
HIF1A-206ENST00000553999 PSME4Q14997 1843 aa25.94■■□□□ 1.74
HIF1A-206ENST00000553999 USP17L8P0C7I0 530 aa25.94■■□□□ 1.74
HIF1A-206ENST00000553999 HSPA1AP0DMV8 641 aaKnown RBP25.94■■□□□ 1.74
HIF1A-206ENST00000553999 HSPA1BP0DMV9 641 aaKnown RBP25.94■■□□□ 1.74
HIF1A-206ENST00000553999 DACT2Q5SW24 774 aa25.94■■□□□ 1.74
HIF1A-206ENST00000553999 KRT26Q7Z3Y9 468 aa25.94■■□□□ 1.74
HIF1A-206ENST00000553999 FRAT1Q92837 279 aaPredicted RBP25.94■■□□□ 1.74
HIF1A-206ENST00000553999 DEFB115Q30KQ5 88 aa25.93■■□□□ 1.74
HIF1A-206ENST00000553999 LRRC24Q50LG9 513 aa25.93■■□□□ 1.74
HIF1A-206ENST00000553999 CDC37L1Q7L3B6 337 aa25.93■■□□□ 1.74
HIF1A-206ENST00000553999 DCPSQ96C86 337 aaKnown RBP25.93■■□□□ 1.74
HIF1A-206ENST00000553999 API5Q9BZZ5 524 aaKnown RBP25.93■■□□□ 1.74
HIF1A-206ENST00000553999 BCAR3O75815 825 aa25.92■■□□□ 1.74
HIF1A-206ENST00000553999 RABL6Q3YEC7 729 aaPredicted RBP25.92■■□□□ 1.74
HIF1A-206ENST00000553999 TTLL5Q6EMB2 1281 aa25.92■■□□□ 1.74
HIF1A-206ENST00000553999 ZC3H15Q8WU90 426 aaKnown RBP25.92■■□□□ 1.74
HIF1A-206ENST00000553999 GMLQ99445 158 aa25.92■■□□□ 1.74
HIF1A-206ENST00000553999 CD209Q9NNX6 404 aa25.92■■□□□ 1.74
HIF1A-206ENST00000553999 MYOZ2Q9NPC6 264 aa25.92■■□□□ 1.74
HIF1A-206ENST00000553999 PGAP2Q9UHJ9 254 aa25.92■■□□□ 1.74
HIF1A-206ENST00000553999 SCARF1Q14162 830 aa25.91■■□□□ 1.74
HIF1A-206ENST00000553999 ANGEL2Q5VTE6 544 aaKnown RBP25.91■■□□□ 1.74
HIF1A-206ENST00000553999 KIAA0825Q8IV33 1275 aa25.91■■□□□ 1.74
HIF1A-206ENST00000553999 IRS2Q9Y4H2 1338 aa25.9■■□□□ 1.74
HIF1A-206ENST00000553999 TRPM7Q96QT4 1865 aa25.9■■□□□ 1.74
HIF1A-206ENST00000553999 UBTFL1P0CB47 393 aaPredicted RBP25.9■■□□□ 1.74
HIF1A-206ENST00000553999 ZNF280AP59817 542 aaPredicted RBP25.9■■□□□ 1.74
HIF1A-206ENST00000553999 STRIP1Q5VSL9 837 aa25.9■■□□□ 1.74
HIF1A-206ENST00000553999 CYP4F22Q6NT55 531 aa25.9■■□□□ 1.74
HIF1A-206ENST00000553999 ZNF804AQ7Z570 1209 aa25.9■■□□□ 1.74
HIF1A-206ENST00000553999 ZNF646O15015 1829 aaPredicted RBP25.9■■□□□ 1.74
HIF1A-206ENST00000553999 KIF16BQ96L93 1317 aa25.89■■□□□ 1.74
HIF1A-206ENST00000553999 F8W031 263 aaPredicted RBP25.89■■□□□ 1.74
HIF1A-206ENST00000553999 SASH1O94885 1247 aa25.89■■□□□ 1.74
HIF1A-206ENST00000553999 GYG1P46976 350 aa25.89■■□□□ 1.74
HIF1A-206ENST00000553999 METTL24Q5JXM2 366 aa25.89■■□□□ 1.74
HIF1A-206ENST00000553999 RASSF10A6NK89 507 aa25.88■■□□□ 1.73
HIF1A-206ENST00000553999 CLUAP1Q96AJ1 413 aa25.88■■□□□ 1.73
HIF1A-206ENST00000553999 MEIS3Q99687 375 aa25.88■■□□□ 1.73
HIF1A-206ENST00000553999 LRRFIP2Q9Y608 721 aaKnown RBP25.88■■□□□ 1.73
HIF1A-206ENST00000553999 NBPF9Q3BBW0 867 aa25.87■■□□□ 1.73
HIF1A-206ENST00000553999 SULF1Q8IWU6 871 aa25.87■■□□□ 1.73
HIF1A-206ENST00000553999 IQSEC3Q9UPP2 1182 aaPredicted RBP25.87■■□□□ 1.73
HIF1A-206ENST00000553999 TLL2Q9Y6L7 1015 aa25.87■■□□□ 1.73
HIF1A-206ENST00000553999 CERS5Q8N5B7 392 aa25.86■■□□□ 1.73
HIF1A-206ENST00000553999 CAPNS2Q96L46 248 aa25.86■■□□□ 1.73
HIF1A-206ENST00000553999 SIL1Q9H173 461 aa25.86■■□□□ 1.73
HIF1A-206ENST00000553999 RIPOR2Q9Y4F9 1068 aa25.86■■□□□ 1.73
HIF1A-206ENST00000553999 ZNF609O15014 1411 aa25.86■■□□□ 1.73
HIF1A-206ENST00000553999 WDR33Q9C0J8 1336 aaKnown RBP25.86■■□□□ 1.73
HIF1A-206ENST00000553999 OGFOD1Q8N543 542 aa25.85■■□□□ 1.73
HIF1A-206ENST00000553999 MROH5Q6ZUA9 1318 aa25.85■■□□□ 1.73
HIF1A-206ENST00000553999 PRAMEF18Q5VWM3 479 aa25.84■■□□□ 1.73
HIF1A-206ENST00000553999 C15orf52Q6ZUT6 534 aaKnown RBP25.84■■□□□ 1.73
HIF1A-206ENST00000553999 MYO3BQ8WXR4 1341 aa25.84■■□□□ 1.73
HIF1A-206ENST00000553999 POLR2AP24928 1970 aaKnown RBP25.84■■□□□ 1.73
HIF1A-206ENST00000553999 TRIM27P14373 513 aa25.83■■□□□ 1.73
HIF1A-206ENST00000553999 BRPF1P55201 1214 aaPredicted RBP25.83■■□□□ 1.73
HIF1A-206ENST00000553999 CDCA5Q96FF9 252 aa25.83■■□□□ 1.73
HIF1A-206ENST00000553999 PCDHAC2Q9Y5I4 1007 aa25.83■■□□□ 1.73
HIF1A-206ENST00000553999 AOC2O75106 756 aa25.82■■□□□ 1.72
HIF1A-206ENST00000553999 RFX5P48382 616 aaPredicted RBP25.82■■□□□ 1.72
HIF1A-206ENST00000553999 UBE4AQ14139 1066 aa25.82■■□□□ 1.72
HIF1A-206ENST00000553999 SAPCD2Q86UD0 394 aa25.82■■□□□ 1.72
HIF1A-206ENST00000553999 IL1R1P14778 569 aa25.81■■□□□ 1.72
HIF1A-206ENST00000553999 CHAF1AQ13111 956 aaPredicted RBP25.81■■□□□ 1.72
HIF1A-206ENST00000553999 HDAC9Q9UKV0 1011 aa25.81■■□□□ 1.72
HIF1A-206ENST00000553999 PA2G4Q9UQ80 394 aaKnown RBP25.81■■□□□ 1.72
HIF1A-206ENST00000553999 WNT10BO00744 389 aa25.8■■□□□ 1.72
HIF1A-206ENST00000553999 HIBADHP31937 336 aaKnown RBP25.8■■□□□ 1.72
HIF1A-206ENST00000553999 HUNKP57058 714 aa25.8■■□□□ 1.72
HIF1A-206ENST00000553999 COL13A1Q5TAT6 717 aaPredicted RBP25.8■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms