RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 FLIIQ13045 1269 aa14.82□□□□□ -0.04
PRPF40B-212ENST00000551111 FAM161AQ3B820 660 aa14.82□□□□□ -0.04
PRPF40B-212ENST00000551111 NBPF9Q3BBW0 867 aa14.82□□□□□ -0.04
PRPF40B-212ENST00000551111 MOB2Q70IA6 237 aa14.82□□□□□ -0.04
PRPF40B-212ENST00000551111 USP17L1Q7RTZ2 530 aa14.82□□□□□ -0.04
PRPF40B-212ENST00000551111 C2orf69Q8N8R5 385 aa14.82□□□□□ -0.04
PRPF40B-212ENST00000551111 CDC5LQ99459 802 aaKnown RBP14.82□□□□□ -0.04
PRPF40B-212ENST00000551111 MRS2Q9HD23 443 aa14.82□□□□□ -0.04
PRPF40B-212ENST00000551111 MYOZ2Q9NPC6 264 aa14.82□□□□□ -0.04
PRPF40B-212ENST00000551111 F6X3S4 739 aa14.81□□□□□ -0.04
PRPF40B-212ENST00000551111 USP17L8P0C7I0 530 aa14.81□□□□□ -0.04
PRPF40B-212ENST00000551111 ITGA6P23229 1130 aa14.81□□□□□ -0.04
PRPF40B-212ENST00000551111 KIF23Q02241 960 aaPredicted RBP14.81□□□□□ -0.04
PRPF40B-212ENST00000551111 EXOSC9Q06265 439 aaKnown RBP14.81□□□□□ -0.04
PRPF40B-212ENST00000551111 NOGQ13253 232 aa14.81□□□□□ -0.04
PRPF40B-212ENST00000551111 DACT2Q5SW24 774 aa14.81□□□□□ -0.04
PRPF40B-212ENST00000551111 PODNQ7Z5L7 613 aa14.81□□□□□ -0.04
PRPF40B-212ENST00000551111 SULF1Q8IWU6 871 aa14.81□□□□□ -0.04
PRPF40B-212ENST00000551111 IL16Q14005 1332 aa14.81□□□□□ -0.04
PRPF40B-212ENST00000551111 MED23Q9ULK4 1368 aa14.81□□□□□ -0.04
PRPF40B-212ENST00000551111 CCDC85CA6NKD9 419 aa14.8□□□□□ -0.04
PRPF40B-212ENST00000551111 ZNF157P51786 506 aaPredicted RBP14.8□□□□□ -0.04
PRPF40B-212ENST00000551111 FKBP5Q13451 457 aaPredicted RBP14.8□□□□□ -0.04
PRPF40B-212ENST00000551111 DNAAF4Q8WXU2 420 aa14.8□□□□□ -0.04
PRPF40B-212ENST00000551111 PLA2G12BQ9BX93 195 aa14.8□□□□□ -0.04
PRPF40B-212ENST00000551111 MCOLN1Q9GZU1 580 aa14.8□□□□□ -0.04
PRPF40B-212ENST00000551111 CSF1RP07333 972 aa14.79□□□□□ -0.04
PRPF40B-212ENST00000551111 FBXW7Q969H0 707 aa14.79□□□□□ -0.04
PRPF40B-212ENST00000551111 PAPPA2Q9BXP8 1791 aa14.79□□□□□ -0.04
PRPF40B-212ENST00000551111 CHMP4AQ9BY43 222 aa14.79□□□□□ -0.04
PRPF40B-212ENST00000551111 SLC10A3P09131 477 aa14.78□□□□□ -0.04
PRPF40B-212ENST00000551111 FOXO4P98177 505 aa14.78□□□□□ -0.04
PRPF40B-212ENST00000551111 EPHA10Q5JZY3 1008 aa14.78□□□□□ -0.04
PRPF40B-212ENST00000551111 HELBQ8NG08 1087 aaPredicted RBP14.78□□□□□ -0.04
PRPF40B-212ENST00000551111 CSRNP1Q96S65 589 aa14.78□□□□□ -0.04
PRPF40B-212ENST00000551111 ECM29Q5VYK3 1845 aa14.78□□□□□ -0.04
PRPF40B-212ENST00000551111 ZNF804BA4D1E1 1349 aa14.77□□□□□ -0.04
PRPF40B-212ENST00000551111 IRS2Q9Y4H2 1338 aa14.77□□□□□ -0.04
PRPF40B-212ENST00000551111 UBE2Q2LH0YL09 131 aa14.77□□□□□ -0.05
PRPF40B-212ENST00000551111 WNT10BO00744 389 aa14.77□□□□□ -0.05
PRPF40B-212ENST00000551111 CA12O43570 354 aa14.77□□□□□ -0.05
PRPF40B-212ENST00000551111 TAF5LO75529 589 aa14.77□□□□□ -0.05
PRPF40B-212ENST00000551111 TRPA1O75762 1119 aa14.77□□□□□ -0.05
PRPF40B-212ENST00000551111 SASH1O94885 1247 aa14.77□□□□□ -0.05
PRPF40B-212ENST00000551111 IGHMBP2P38935 993 aaKnown RBP14.77□□□□□ -0.05
PRPF40B-212ENST00000551111 CHRNDQ07001 517 aa14.77□□□□□ -0.05
PRPF40B-212ENST00000551111 RASAL3Q86YV0 1011 aa14.77□□□□□ -0.05
PRPF40B-212ENST00000551111 LINS1Q8NG48 757 aa14.77□□□□□ -0.05
PRPF40B-212ENST00000551111 RNF186Q9NXI6 227 aa14.77□□□□□ -0.05
PRPF40B-212ENST00000551111 PCDHAC2Q9Y5I4 1007 aa14.77□□□□□ -0.05
PRPF40B-212ENST00000551111 TNRC18O15417 2968 aaPredicted RBP14.77□□□□□ -0.05
PRPF40B-212ENST00000551111 DGKZQ13574 1117 aa14.76□□□□□ -0.05
PRPF40B-212ENST00000551111 TTLL5Q6EMB2 1281 aa14.76□□□□□ -0.05
PRPF40B-212ENST00000551111 WDR63Q8IWG1 891 aa14.76□□□□□ -0.05
PRPF40B-212ENST00000551111 CCDC102AQ96A19 550 aa14.76□□□□□ -0.05
PRPF40B-212ENST00000551111 COA1Q9GZY4 146 aa14.76□□□□□ -0.05
PRPF40B-212ENST00000551111 LEMD3Q9Y2U8 911 aa14.76□□□□□ -0.05
PRPF40B-212ENST00000551111 PITPNM2Q9BZ72 1349 aa14.75□□□□□ -0.05
PRPF40B-212ENST00000551111 GTF2IP78347 998 aa14.75□□□□□ -0.05
PRPF40B-212ENST00000551111 NCBP3Q53F19 620 aaKnown RBP14.75□□□□□ -0.05
PRPF40B-212ENST00000551111 BEND3Q5T5X7 828 aa14.75□□□□□ -0.05
PRPF40B-212ENST00000551111 STRIP1Q5VSL9 837 aa14.75□□□□□ -0.05
PRPF40B-212ENST00000551111 KIAA0825Q8IV33 1275 aa14.75□□□□□ -0.05
PRPF40B-212ENST00000551111 CERS5Q8N5B7 392 aa14.75□□□□□ -0.05
PRPF40B-212ENST00000551111 ZNF594Q96JF6 807 aaPredicted RBP14.75□□□□□ -0.05
PRPF40B-212ENST00000551111 MPHOSPH8Q99549 860 aa14.75□□□□□ -0.05
PRPF40B-212ENST00000551111 FZD1Q9UP38 647 aa14.75□□□□□ -0.05
PRPF40B-212ENST00000551111 AOX1Q06278 1338 aa14.74□□□□□ -0.05
PRPF40B-212ENST00000551111 MYH16Q9H6N6 1097 aa14.74□□□□□ -0.05
PRPF40B-212ENST00000551111 ANKRD18BA2A2Z9 1011 aa14.73□□□□□ -0.05
PRPF40B-212ENST00000551111 ANP32CO43423 234 aa14.73□□□□□ -0.05
PRPF40B-212ENST00000551111 LMBR1LQ6UX01 489 aa14.73□□□□□ -0.05
PRPF40B-212ENST00000551111 FAM9BQ8IZU0 186 aa14.73□□□□□ -0.05
PRPF40B-212ENST00000551111 ZBED3Q96IU2 234 aaPredicted RBP14.73□□□□□ -0.05
PRPF40B-212ENST00000551111 ANKRD2Q9GZV1 360 aa14.73□□□□□ -0.05
PRPF40B-212ENST00000551111 CD209Q9NNX6 404 aa14.73□□□□□ -0.05
PRPF40B-212ENST00000551111 JAG2Q9Y219 1238 aa14.73□□□□□ -0.05
PRPF40B-212ENST00000551111 ZNF316A6NFI3 1004 aaPredicted RBP14.72□□□□□ -0.05
PRPF40B-212ENST00000551111 RGS19P49795 217 aa14.72□□□□□ -0.05
PRPF40B-212ENST00000551111 MKRN3Q13064 507 aaKnown RBP14.72□□□□□ -0.05
PRPF40B-212ENST00000551111 PRKG1Q13976 671 aa14.72□□□□□ -0.05
PRPF40B-212ENST00000551111 CHMP3Q9Y3E7 222 aa14.72□□□□□ -0.05
PRPF40B-212ENST00000551111 KCNJ4P48050 445 aa14.71□□□□□ -0.05
PRPF40B-212ENST00000551111 PTPN12Q05209 780 aaKnown RBP14.71□□□□□ -0.05
PRPF40B-212ENST00000551111 IFIT5Q13325 482 aaKnown RBP14.71□□□□□ -0.05
PRPF40B-212ENST00000551111 OGFOD1Q8N543 542 aa14.71□□□□□ -0.05
PRPF40B-212ENST00000551111 KAZALD1Q96I82 304 aa14.71□□□□□ -0.05
PRPF40B-212ENST00000551111 SAGE1Q9NXZ1 904 aa14.71□□□□□ -0.05
PRPF40B-212ENST00000551111 MYO3BQ8WXR4 1341 aa14.7□□□□□ -0.06
PRPF40B-212ENST00000551111 F8W031 263 aaPredicted RBP14.7□□□□□ -0.06
PRPF40B-212ENST00000551111 PLIN1O60240 522 aa14.7□□□□□ -0.06
PRPF40B-212ENST00000551111 TTLL12Q14166 644 aaPredicted RBP14.7□□□□□ -0.06
PRPF40B-212ENST00000551111 GRM8O00222 908 aa14.69□□□□□ -0.06
PRPF40B-212ENST00000551111 TBC1D8O95759 1140 aa14.69□□□□□ -0.06
PRPF40B-212ENST00000551111 FKBP1BP68106 108 aa14.69□□□□□ -0.06
PRPF40B-212ENST00000551111 SLC4A10Q6U841 1118 aa14.69□□□□□ -0.06
PRPF40B-212ENST00000551111 C15orf52Q6ZUT6 534 aaKnown RBP14.69□□□□□ -0.06
PRPF40B-212ENST00000551111 PUS3Q9BZE2 481 aaKnown RBP14.69□□□□□ -0.06
PRPF40B-212ENST00000551111 R3HDMLQ9H3Y0 253 aa14.69□□□□□ -0.06
PRPF40B-212ENST00000551111 PDE4DIPQ5VU43 2346 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 134.8 ms