RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 CUX1P39880 1505 aa7.93□□□□□ -1.14
CPSF6-206ENST00000550987 KHNYNO15037 678 aaKnown RBP7.92□□□□□ -1.14
CPSF6-206ENST00000550987 RARAP10276 462 aa7.92□□□□□ -1.14
CPSF6-206ENST00000550987 FCGRTP55899 365 aa7.92□□□□□ -1.14
CPSF6-206ENST00000550987 RELL1Q8IUW5 271 aa7.92□□□□□ -1.14
CPSF6-206ENST00000550987 SRA1Q9HD15 236 aaKnown RBP7.92□□□□□ -1.14
CPSF6-206ENST00000550987 KANSL3Q9P2N6 904 aa7.92□□□□□ -1.14
CPSF6-206ENST00000550987 AKAP2Q9Y2D5 859 aa7.92□□□□□ -1.14
CPSF6-206ENST00000550987 UHRF1BP1Q6BDS2 1440 aa7.92□□□□□ -1.14
CPSF6-206ENST00000550987 A0A1W2PP55 124 aa7.91□□□□□ -1.14
CPSF6-206ENST00000550987 CYP2E1P05181 493 aaPredicted RBP7.91□□□□□ -1.14
CPSF6-206ENST00000550987 PSAPP07602 524 aa7.91□□□□□ -1.14
CPSF6-206ENST00000550987 SFSWAPQ12872 951 aaKnown RBP7.91□□□□□ -1.14
CPSF6-206ENST00000550987 KIAA0319Q5VV43 1072 aa7.91□□□□□ -1.14
CPSF6-206ENST00000550987 DTHD1Q6ZMT9 781 aa7.91□□□□□ -1.14
CPSF6-206ENST00000550987 DPH6Q7L8W6 267 aa7.91□□□□□ -1.14
CPSF6-206ENST00000550987 NCAPG2Q86XI2 1143 aa7.91□□□□□ -1.14
CPSF6-206ENST00000550987 PCDHGC4Q9Y5F7 938 aa7.91□□□□□ -1.14
CPSF6-206ENST00000550987 LRRC7Q96NW7 1537 aa7.91□□□□□ -1.14
CPSF6-206ENST00000550987 NHSL1Q5SYE7 1610 aa7.91□□□□□ -1.14
CPSF6-206ENST00000550987 NCOA1Q15788 1441 aa7.9□□□□□ -1.14
CPSF6-206ENST00000550987 SMARCA5O60264 1052 aaPredicted RBP7.9□□□□□ -1.14
CPSF6-206ENST00000550987 LBRQ14739 615 aaKnown RBP7.9□□□□□ -1.14
CPSF6-206ENST00000550987 CCDC85BQ15834 202 aaPredicted RBP7.9□□□□□ -1.14
CPSF6-206ENST00000550987 TRIM46Q7Z4K8 759 aa7.9□□□□□ -1.14
CPSF6-206ENST00000550987 GSX2Q9BZM3 304 aa7.9□□□□□ -1.14
CPSF6-206ENST00000550987 LATS2Q9NRM7 1088 aa7.9□□□□□ -1.14
CPSF6-206ENST00000550987 DNMT3LQ9UJW3 386 aa7.9□□□□□ -1.14
CPSF6-206ENST00000550987 CUL7Q14999 1698 aa7.89□□□□□ -1.15
CPSF6-206ENST00000550987 DCDC2BA2VCK2 349 aa7.89□□□□□ -1.15
CPSF6-206ENST00000550987 H7C1W4 665 aa7.89□□□□□ -1.15
CPSF6-206ENST00000550987 AXIN1O15169 862 aa7.89□□□□□ -1.15
CPSF6-206ENST00000550987 MMP20O60882 483 aa7.89□□□□□ -1.15
CPSF6-206ENST00000550987 AVPP01185 164 aa7.89□□□□□ -1.15
CPSF6-206ENST00000550987 KCNQ4P56696 695 aa7.89□□□□□ -1.15
CPSF6-206ENST00000550987 PWP1Q13610 501 aa7.89□□□□□ -1.15
CPSF6-206ENST00000550987 CTC1Q2NKJ3 1217 aa7.89□□□□□ -1.15
CPSF6-206ENST00000550987 PKDCCQ504Y2 493 aa7.89□□□□□ -1.15
CPSF6-206ENST00000550987 OR13H1Q8NG92 308 aa7.89□□□□□ -1.15
CPSF6-206ENST00000550987 PMFBP1Q8TBY8 1022 aa7.89□□□□□ -1.15
CPSF6-206ENST00000550987 SPACA7Q96KW9 195 aa7.89□□□□□ -1.15
CPSF6-206ENST00000550987 GMLQ99445 158 aa7.89□□□□□ -1.15
CPSF6-206ENST00000550987 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.89□□□□□ -1.157e-7■□□□□ 9.9
CPSF6-206ENST00000550987 NOC4LQ9BVI4 516 aaKnown RBP7.89□□□□□ -1.15
CPSF6-206ENST00000550987 NUCKS1Q9H1E3 243 aaKnown RBP7.89□□□□□ -1.15
CPSF6-206ENST00000550987 LIN7BQ9HAP6 207 aa7.89□□□□□ -1.15
CPSF6-206ENST00000550987 COPRSQ9NQ92 184 aa7.89□□□□□ -1.15
CPSF6-206ENST00000550987 KBTBD4Q9NVX7 518 aa7.89□□□□□ -1.15
CPSF6-206ENST00000550987 MINDY4BA8MYZ0 360 aa7.88□□□□□ -1.15
CPSF6-206ENST00000550987 STK10O94804 968 aaKnown RBP7.88□□□□□ -1.15
CPSF6-206ENST00000550987 FAM157BP0CG42 384 aa7.88□□□□□ -1.15
CPSF6-206ENST00000550987 XRCC5P13010 732 aaKnown RBP7.88□□□□□ -1.15
CPSF6-206ENST00000550987 NFKB1P19838 968 aa7.88□□□□□ -1.15
CPSF6-206ENST00000550987 CANXP27824 592 aaKnown RBP7.88□□□□□ -1.15
CPSF6-206ENST00000550987 GBP2P32456 591 aaPredicted RBP7.88□□□□□ -1.15
CPSF6-206ENST00000550987 HYAL2Q12891 473 aa7.88□□□□□ -1.15
CPSF6-206ENST00000550987 PAK2Q13177 524 aa7.88□□□□□ -1.15
CPSF6-206ENST00000550987 SOGA3Q5TF21 947 aa7.88□□□□□ -1.15
CPSF6-206ENST00000550987 ARMC5Q96C12 935 aa7.88□□□□□ -1.15
CPSF6-206ENST00000550987 HIRIP3Q9BW71 556 aaPredicted RBP7.88□□□□□ -1.15
CPSF6-206ENST00000550987 OXCT2Q9BYC2 517 aaPredicted RBP7.88□□□□□ -1.15
CPSF6-206ENST00000550987 ZFYVE1Q9HBF4 777 aa7.88□□□□□ -1.15
CPSF6-206ENST00000550987 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.88□□□□□ -1.15
CPSF6-206ENST00000550987 TMEM238LA0A1B0GVL6 79 aa7.87□□□□□ -1.15
CPSF6-206ENST00000550987 NEUROD1Q13562 356 aa7.87□□□□□ -1.15
CPSF6-206ENST00000550987 ERMP1Q7Z2K6 904 aa7.87□□□□□ -1.15
CPSF6-206ENST00000550987 GPRASP2Q96D09 838 aa7.87□□□□□ -1.15
CPSF6-206ENST00000550987 OSMRQ99650 979 aa7.87□□□□□ -1.15
CPSF6-206ENST00000550987 SPON2Q9BUD6 331 aa7.87□□□□□ -1.15
CPSF6-206ENST00000550987 RSRP1Q9BUV0 290 aa7.87□□□□□ -1.15
CPSF6-206ENST00000550987 CUEDC1Q9NWM3 386 aaPredicted RBP7.87□□□□□ -1.15
CPSF6-206ENST00000550987 MARK1Q9P0L2 795 aa7.87□□□□□ -1.15
CPSF6-206ENST00000550987 SALL4Q9UJQ4 1053 aa7.87□□□□□ -1.15
CPSF6-206ENST00000550987 DGAT1O75907 488 aa7.86□□□□□ -1.15
CPSF6-206ENST00000550987 MAPTP10636 758 aaKnown RBP7.86□□□□□ -1.15
CPSF6-206ENST00000550987 RLBP1P12271 317 aa7.86□□□□□ -1.15
CPSF6-206ENST00000550987 PLAURQ03405 335 aa7.86□□□□□ -1.15
CPSF6-206ENST00000550987 TNP2Q05952 138 aa7.86□□□□□ -1.15
CPSF6-206ENST00000550987 LAMC2Q13753 1193 aa7.86□□□□□ -1.15
CPSF6-206ENST00000550987 MAP3K11Q16584 847 aa7.86□□□□□ -1.15
CPSF6-206ENST00000550987 BHMTQ93088 406 aa7.86□□□□□ -1.15
CPSF6-206ENST00000550987 SPATA32Q96LK8 384 aa7.86□□□□□ -1.15
CPSF6-206ENST00000550987 LNPKQ9C0E8 428 aa7.86□□□□□ -1.15
CPSF6-206ENST00000550987 TLR7Q9NYK1 1049 aaKnown RBP7.86□□□□□ -1.15
CPSF6-206ENST00000550987 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.86□□□□□ -1.15
CPSF6-206ENST00000550987 CDK12Q9NYV4 1490 aaPredicted RBP7.86□□□□□ -1.15
CPSF6-206ENST00000550987 PTPRKQ15262 1439 aa7.86□□□□□ -1.15
CPSF6-206ENST00000550987 ABCC2Q92887 1545 aa7.85□□□□□ -1.15
CPSF6-206ENST00000550987 F6X3S4 739 aa7.85□□□□□ -1.15
CPSF6-206ENST00000550987 HSP90B1P14625 803 aaKnown RBP7.85□□□□□ -1.15
CPSF6-206ENST00000550987 VEGFBP49765 207 aa7.85□□□□□ -1.15
CPSF6-206ENST00000550987 SMCPP49901 116 aaPredicted RBP7.85□□□□□ -1.15
CPSF6-206ENST00000550987 SPEM2Q0P670 501 aa7.85□□□□□ -1.15
CPSF6-206ENST00000550987 PEAR1Q5VY43 1037 aaPredicted RBP7.85□□□□□ -1.15
CPSF6-206ENST00000550987 KIAA0825Q8IV33 1275 aa7.85□□□□□ -1.15
CPSF6-206ENST00000550987 GLIS3Q8NEA6 775 aa7.85□□□□□ -1.15
CPSF6-206ENST00000550987 PUS7Q96PZ0 661 aaKnown RBP7.85□□□□□ -1.15
CPSF6-206ENST00000550987 IGFLR1Q9H665 355 aa7.85□□□□□ -1.15
CPSF6-206ENST00000550987 EFCC1Q9HA90 598 aa7.85□□□□□ -1.15
CPSF6-206ENST00000550987 ZFATQ9P243 1243 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms